The gene/protein map for NC_008228 is currently unavailable.
Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 109898257

GI number:

Start: 2351338

End: 2354370

Strand: Direct

Name: Not Available

Synonym: Patl_1940

Alternate gene names: NA

Gene position: NA

Preceding gene: 109898256

Following gene: 109898258

Centisome position: NA

GC content: NA

Gene sequence:

>3033_bases
ATGAAAAGATTTACACCGAATTTGATTACCGCGGCGTTGCTGGCAAGTGGCACTGCGTTTATCGCATGTTCAGCAGTAGC
ACAGCAATCGGTAGATGAACCAATCACAGCAGGGACCGTCAGTGAAAATGACGAACAAAAACAAGGCCAGGAACTCGAGC
GCATAGAGGTCAGAGGCTTTGCCACCAGTTTGATCCAGTCACTTAACCAAAAACGTTTTAGTGATACGGTATCCGAGCAA
ATTTCAGCAGATGACTTGGGCGGCTTGCCCGATGTGTCCATGGCAGATGCATTGACTCGATTACCCGGTATTTCAGCTGT
AAGAACTGGCGGCCAAGCAGCAGAGATCAACATTCGTGGTATGTCGGGAGACTTTGTATTCTCGACCCTCAATGGCCGCG
AGCAAGTGTCTACCAGTGGCTCGCGCTCTATTGAGTTTGACCAATATCCTTCAGAGCTGATTTCATCGGCTGCAGTGTAT
AAATCCCCTAAGGCTTCGCTGATTGAAGGCGGTGTGGCCGGTAGCGTGGAGCTGCAAACAGCTAGCCCGTTAAGTAACGA
TCAACAACACACGTTTAATGTTAACGCTCGAGGTATGTTTAACGACAGAGCAGGCGAGGTGTCTGATGCGGAAGAGTTTG
GCCATCGTTTAAGTTTGTCTTATCAAGGTAAGTATTTAGACGATACCTTAGGGGTAGCCCTTGGCTACGCACGCTTATTT
CAGCCAAGTGTGTCAACCCAATTCGTTGGCCTTGCCTATAACGCCACTAAAGACGTGGATAATGATGGTGACGAAGAGTT
TCTAGGCGAGGGCTTTGAGTTACAACACAAAGGTGGCGAAGAAACCCGCGACGGTTATATGGGCGCGATTGAGTGGACGC
CTGTTGATACCTTTACCCTAAAGGCGGATGCGTTTTTCTCAAAATTTGACTCTGAAGAATTCGCCCGTGGGTTTCGGGTC
AAGCTAGGCGGTGCATCTGCTGCTGTAGCCAACCCTGTGCTCAATGGTAACGCTGTAATAGGGGGTACGTTTAATCGCAC
ATCACAAAGCTTTACCCGTGTGGAGTTGGTTAACGATGACAACCAAGACTATGACCAAGTGTCCAGCTATGGCATTAACG
CCGATTGGCAAGCGACAGACAACTTAACCTTGGCATTTGATGTGTCACAGTCAGTTGCTAAGAGTGACTTTAGAAATGGT
TTGTTATGGGCCCTAGTGGGGGAAGATGCCAATGCTGAGCTACCCGTTTTCGATAACGACATCTCCATTAGTTACCTGTT
GCACGGTTTAGATTTACCCGATGTCGGCTTTAGCCAAGCCGAGGCCTTCACTGATTTAGATAGGGTAATGGTCACAAAAT
ACGGTATTTACCCTTACGAAAACGAAGATGAGCTGAACGCTTATCGCTTTGATTTGACCTACGAAATAGACGACAACGCT
TTTTTCTCTTCAGTTGAATTTGGTGCGCGTTACTCTGATCGTGAATACAGCAACGACCGTTCAGTATTCGAATATGGCAG
CGACTCTAGCTTTTCAGCCAGTCAACCGCCGCTGCGCTTAACGGACGATATGGTGGATGTGGTCGATTGGGAAGGTGACT
TTGGTTATTTGCCTAGCTATCTTTCTATCGACTTAAATTCAGCGCTCAATGCGTGGTTCCCCTCCGGCATACCGCAGCCA
GTTAAAACGTGGGGGGCAGGTAGCCCCGGCGTGATAAACGGACCGGGCGAGGGGCCTAACACCAGCTGGACCATGCTTGA
AAGCGGTAAAGTGTTTGAAAAGGTCACCGCTGCATACATCATGGCAAACATAGATACTGAGCTGTTTGGCTTGCCCGTTA
CCGGAAACGTGGGTGTGCGTATGGTGGAAACCGAGCAATCATCTACAGTACTGCAAGACGTGTCTGAAGACATCATTGAC
CCAGATACAGGTGAAGTCATTGATACCCGAGGTAACCCAGCCAACGGTGCTCAATTTATTACGGATGATGCGGGCTTGGT
GAATGACTTTTATCGCCCAGCACTGCTGACTGATAAATACCGAGATTACCTACCTTCAATCAACCTGAACGTTAAGCTGA
CTGACAGTGAACAGCTGCGCTTTGCTGCGGCGAAAGTGCTTGGCCGAGCGCCGATTAATCGTTTGTTTGCCAACGCCACT
TTGCGGGTGGAAGACGTACAAGCCTTTCGTGACCAAGACACAGGCGAGATTGTTTTATCAAAACCGACGGCAGTTATCTC
TGGCAGTGCCACGAACAGCCCGTACCTTCGCCCGTTCTATGCCGATCAATACGATATCTCTTACGAGAAGTACTTTGAAG
ATACTGATGGTGCCTTCATCGCGGCGTTATTTTACAAAGACATTAAGTCGTTCATCAATACCTTTAAAGAAGACCCGTTT
GATTTCACCGGTAACGGATTCACCATCCCGGCAGACATTACCGTACTGGTGACAGATGAAGAGGGCGAGCCGTTATTTAA
TGACGATGGTTCACGCTTATCGGTGCAAGTACCCACTGAAAATGGTGGCTATGAAACCGCCGTGAATAACGACAAAGGCG
GCTATATTCGCGGCGCTGAGTTGTCATATACGCAAATCTATTCGTTTCTTCCTGACATGTGGTCGGGCTTGGGCATGAGT
GCCAGCTATTCCTACACAGAAAGTGAAATTCAAACCCAAACCACATTAGGCGGTGCATCGGTAGAGCAAACCTTGCCAGG
TTTATCTGAAAACGTCGTCGCGGCCACGGTGTTCTGGGAATACGAAGATTTCGAAACTCGATTAAGTGTGCGTTGGCGTG
ATGCGTTTGTGTCAAAGCAGGTGGCGGTGAATGAACAAGTGGTTAATTTCGATTCAGAAACCGTGATTGATTATCAGGCG
TCATACAACATCAACGAGAATCTCGGCATGTTGTTTCAAGTGAATAACCTGACCGACGAGCCAACCAAAAGTTATTTCGG
CAGTGAAGCGCAAACGGGGACCATTCAGTACTTTGGTCGCCAGATATTTCTAGGCGTGACGTACTCGCTTTAA

Upstream 100 bases:

>100_bases
ACAAGGTGTACTTCGTTTCAAAAGTTAACACTTATCTTGCGTTGATAAATGACCAAGAAGGTGTGAAACGGACGTTCGCC
ATATGTAATGGGACACACGC

Downstream 100 bases:

>100_bases
TTGCTAACGCATTTTCATTTATGCATGACTAAATTCATTGCGCCAGCGTTGCGTGATGATTGTTATTTGATAAAAATTTT
ATGGAGTATAAACGTATGTT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1010_residues
MKRFTPNLITAALLASGTAFIACSAVAQQSVDEPITAGTVSENDEQKQGQELERIEVRGFATSLIQSLNQKRFSDTVSEQ
ISADDLGGLPDVSMADALTRLPGISAVRTGGQAAEINIRGMSGDFVFSTLNGREQVSTSGSRSIEFDQYPSELISSAAVY
KSPKASLIEGGVAGSVELQTASPLSNDQQHTFNVNARGMFNDRAGEVSDAEEFGHRLSLSYQGKYLDDTLGVALGYARLF
QPSVSTQFVGLAYNATKDVDNDGDEEFLGEGFELQHKGGEETRDGYMGAIEWTPVDTFTLKADAFFSKFDSEEFARGFRV
KLGGASAAVANPVLNGNAVIGGTFNRTSQSFTRVELVNDDNQDYDQVSSYGINADWQATDNLTLAFDVSQSVAKSDFRNG
LLWALVGEDANAELPVFDNDISISYLLHGLDLPDVGFSQAEAFTDLDRVMVTKYGIYPYENEDELNAYRFDLTYEIDDNA
FFSSVEFGARYSDREYSNDRSVFEYGSDSSFSASQPPLRLTDDMVDVVDWEGDFGYLPSYLSIDLNSALNAWFPSGIPQP
VKTWGAGSPGVINGPGEGPNTSWTMLESGKVFEKVTAAYIMANIDTELFGLPVTGNVGVRMVETEQSSTVLQDVSEDIID
PDTGEVIDTRGNPANGAQFITDDAGLVNDFYRPALLTDKYRDYLPSINLNVKLTDSEQLRFAAAKVLGRAPINRLFANAT
LRVEDVQAFRDQDTGEIVLSKPTAVISGSATNSPYLRPFYADQYDISYEKYFEDTDGAFIAALFYKDIKSFINTFKEDPF
DFTGNGFTIPADITVLVTDEEGEPLFNDDGSRLSVQVPTENGGYETAVNNDKGGYIRGAELSYTQIYSFLPDMWSGLGMS
ASYSYTESEIQTQTTLGGASVEQTLPGLSENVVAATVFWEYEDFETRLSVRWRDAFVSKQVAVNEQVVNFDSETVIDYQA
SYNINENLGMLFQVNNLTDEPTKSYFGSEAQTGTIQYFGRQIFLGVTYSL

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA