Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 109898258

GI number:

Start: 2354466

End: 2358818

Strand: Direct

Name: Not Available

Synonym: Patl_1941

Alternate gene names: NA

Gene position: NA

Preceding gene: 109898257

Following gene: 109898259

Centisome position: NA

GC content: NA

Gene sequence:

>4353_bases
ATGTTTACTCGCACCAATAGTCTGCCTTTGTTGGCAATTTCAATTAGTTTACTTAGCCTCAATGGCTGCGGTGGTTCAGG
CTCCGAGCCCGGCACCACATTATTAACCTGTAGCATCCCTAATGTGCCCGATGCCGCTGGCACCAGTTGCGTGGCCCCAG
AGCCGATTAGCTGTGCGCCACCAACCGTGCCTGACGCCTTAAACGAGTATTGCGTGGTAGGGGCTGACCCTGCAGCACCT
GCACCTATGGCAAGCCCCGCGATGGACCAAGCCGTATTGTATTTTAACTTAGCCGCTAAAGGCGCTGACAACAGCCAAAA
TGATGAAACCTACACTGGCTATCGTTTACATACTTGGAATAACGATACGTGTGACGCCTACGCCGATGCTGACACCGATT
GGGCGAATGGCCGCGAACACACAGGCATCGACCCCAATTATGGTGCGTACTGGGTCCTTGAATTAAAACCGGATTACGCT
GGCACACTGGGTGCGTGCGGTAATTTCATTATTCACGTAGGCACTGATGACGCTGGCAAAGAGCTTGGTGGCGGTGACTT
TACAATGCCTTTATCACAAGACGATCCCGAGTTTGCCAGAATGAACTTTACCTTCACTGACGTGGCTTCTATTTTCGAAT
TCCCGATTGTGTCGTTAGGGCCTCAACCGGTGAAAATTGATGGTGCGGCTGCCCATTGGATAGATGGCAACACGTTACTG
TGGGATATAGACCCTACCGCTGTTAGCCAAGTGAAATTACATTATTCAGCCAATGCAGACTTAAGCGTTGACGTGGACAC
AGGTCTAAGCGGCACGGCAATCGAGCTTGAAGAAATCGAGCTCACCGACGCGCAAAAAGCCCGCGTACCTCATTTGGCCA
ATATGCAGGCATTTGCAGGCGACTGGAGCACGGATGAGGCAAAAGAGGTGGTTAAAACCCAAGCGTTATTGGCCTCGTAT
GATGCCGAAGGCGTGCTTAATGGCGCGACCCAAATTCAGTTAGCTAACGCCATAGATGCGCTGTACACCCAGGGCGAAAA
TGATGCTGATGAAGCCCGCTTGGGGGCGGTTTACAGCGACGGGGGGATTCAAGTTAACCTATGGGCTCCGACTGCTCAGT
CAGTGAGTTTGAAACTGTTTAATGATGCAAAAGCAGAAACGGCCAGCTACCCCATGGCGCTTGATAGCAATAGTGGCATA
TGGCGCTATGAGGGCGGTGCAGAGCTTGACCGTCAATTGTATCGTTTCGAAGTAACAGCCTATCATCCAGTGACTATGTT
GCTTGAAACCATGCTCACAACGGACCCTTATTCGTTGAGCTTATCCACCAATAGCCGCTTCTCGCAGTTTGTAAATTTAA
ATGACGAAGACCTCAAGCCTGAGGGGTGGGAAACCCACGAGATCCCTACCATCTCCAACCCTGAAGATGCCGTGATCTAC
GAAGGTCATATTCGGGATTTCAGTGTGCGTGATGAAAGCACCAGTGCACAACATCGCGGTAAATATTTGGCGTTCACCGA
ACAGGGCAGTGTGCCCAATCAGCATTTAGCGAAATTAGTTGAAAACGGTTTGACTCATTTTCATGTGTTGCCAGCAAACG
ATATGGCGACGGTTGAAGAAGATGAAAGCCAAAGTGTTGACTTGACCAGTACTGTAGCGGATTTATGCCGCCTAAATCGC
CAAGCGGCCGTGTGCGATGAAGAAAACGCAGACGCGACTCTGCAATCTGTGTTTGATAGTTATGACGCTATCGCTGAGCC
ACAAAAAGCCCAAGCTCTCACCGAGCAAATGCGCGGCGATGATAGGTTTAACTGGGGCTACGATCCTTATCACTTCAACG
TGCCAGAAGGGAGCTATGCCACTGACGCGGATGGTGTAACACGCATAAAAGAGATGCGTGCGATGAATCAATCATTACAT
GAAATGGGCATGCGAGTAGCGCTAGATGTGGTGTACAACCATACCAATGCGTCTGGCTTAAATGGCAAGTCGGTATTGGA
TAAAGTCGTGCCGGGCTATTATCACAGATATGACACCATTACCGGTGGTATCGTGCGCGAAACGTGCTGTGACGACACCG
AGCCACGCAATCGCATGATGGAAAAGTTCATGCAAGACTCGTTGGTGATGTGGGCCACGCAGTACAAGTTCGACTCATTC
CGTTTTGACATTATGAGTCAAGCCACCAAAGACACCATGCTGCGCTTAGAATCCGCTGTTAAAGCGGTGGATGAAGACAA
CTATTTCTATGGTGAAGGTTGGATAAAAGAAGACCGAGGCTACGAGCAAGCTACGCAGATTAATATGGCAGGCACACAAA
TTGGCACCTACAACGACCGCATTCGCGAAGCTGTGCGCCAAGGCCAAATATTCAGTACCGAGCCAAGCGATAGCGCATTA
GCCGCCCAAGATAACGTTAAAATGAGCCTAGCAGGTACGTTAACTGACTATATTTTGGAAGATTACAAAGGCGCAGCGTC
AGCCACCAGTAATATAGGTGGCTACGCAACTGACCCAGCTGACATCATCAACTATGTGTCAAAGCATGATAATGAAACCT
TGTGGGATCAATTGCAGTACACCTTACCCAACGATATGACCTTGGCCGAGCGGGTACGGGCGCAGAATATTGCGGCGACC
CTTCCTTTGATGTCTCAAGGTATTCCGTTCTTTCAATTAGGCGGTGATTTCTTGCGCTCTAAATCGATGGATCGCAACAC
CTATGATGCCGGCGATTGGTTTAACTATGTAGATTTCACTATGAACAGTAATAACTGGCTGGTGGGGCTACCGTTAGCTC
AAGATAACGAAGGTCGCTGGGCAGAAATGGCTAATTTCATCTACAGCCCTGAGCGCGCCGCCAGCATGACCGAAATTGAG
TTTGCATCTAATGTGTTTAATGAGTTGCTTAAAATACGTAGTTCATCAGCGTTATTCCGCTTAACCACCGCTGACGATAT
TATCGACCGTATTGGCTTTCATAACATCGGCGCCCGTCAAACCCAAGGTTTGATTGTGATGAGCATTGATGATGGCATAG
CGGCTGACAATGCCGAGGCAGGTGAAAACCAAACACAACGAGCTGACATTGACCCAATGGCTGATGCGTTAGTGGTGATC
GTCAACAGTAGCAGCGAACAGCAAACCCATGGCGTGCCAACCGCACAGGGTTTCGAGTTACATTCAGTGTTAATGAACTC
AGTTGATAGCCAAGTACGAGGTGCAAGCTTTGCCCAAGGTGAAGGGGATAACGAAGGCAAAGGCATGTTCACGGTACCTG
CATTGACCACAGCCGTATTCGTTAAACCACAAATGGGCGCACAAGGTGTGGGCTTATCGGCTTATGCGACATCAGGTGCA
CCAGATGTTGTCCCGTATGGCAGCACATCTGTGTTTGTGCGCGGTGCGATGAATGGCTGGGGTGAAGTAGATGAAATGGT
TTATCAAGGCGATGGTGTTTACGCCGCAGTAATATCCATTGAGCCTGGTGATTATGAGTTCAAAGTGGCTTCAGCTGATT
GGTCTACCGTGGATTTTGGTTCCGATAACGGCGATGAATCTGTGGTGCTTGGTGCTGATAAAACCTTAACCGCTGGCGGC
ACAAATTTACAGTTATCCCTAAGCCAAGCTCGCGTGCTTAAATTTACCTTAGATGCCAGTGATAAATCAGCACCGGTATT
AACGGTGGATAACGAAGAGCCGTTTTTTGGCACGACCGTGTTTGTGCGCGGCTCACTCAATGGCTGGGGTGAAGATGACC
CGATGGACTATGCGATTGGCGGTCAATACAGCAGAACCATCGAAGTAACAGCAGGTTCGTACGAGTTTAAAGTGGCTTCT
GCAGACTGGTCAACGGTGGACTTCGGCTCAGCAGATGCTGATGTGAATGTGACGGTAGGCCAAGGCAAGGCGCTCGCGCC
AGGCGGCTCAAACATGACGGTGACCTTCGACTATGATGGTCAATACACCTTTGTATTTGATGCCAGTGATAAAGCCGCAC
CGACGCTCAGCATATTTGACGCCGAGATGTTTGGTGAAAACACGGTCTTTATTCGCGGGGGAATGAACGGCTGGGGTGAA
GTTGATGCACTGGTATTTAACGCTGACGGTAGCTACACCGTTGATATTGCCATTGACGCCGGCAGTTACGAATTCAAAAT
TGCCACGGGCGATTGGTCAACGATAGATTTGGGTGGTGTAGGGGATGACACCCAAGTCATTGTTGGCCAGGCTAAGCAAT
TGACTTACGCCGGTGCTAATTTAATGATTGATATACCAACAACGGCAACTTATCGTTTTAGCGTTGTCGGGCCTGACCCT
TCTGCGCCAACAGTCACGGTGACGCAGTTGTAG

Upstream 100 bases:

>100_bases
TTTAATTGCTAACGCATTTTCATTTATGCATGACTAAATTCATTGCGCCAGCGTTGCGTGATGATTGTTATTTGATAAAA
ATTTTATGGAGTATAAACGT

Downstream 100 bases:

>100_bases
GCTGACTGCTGCATGCAAGCCATGCAATAAAGCACTAGCAAACTCAAAACGCGATATTTATTATCGCGTTTTTTGTTTTT
AGGCAGAGTGATAATTGTTC

Product: pullulanase-type alpha-1,6-glucosidase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1450_residues
MFTRTNSLPLLAISISLLSLNGCGGSGSEPGTTLLTCSIPNVPDAAGTSCVAPEPISCAPPTVPDALNEYCVVGADPAAP
APMASPAMDQAVLYFNLAAKGADNSQNDETYTGYRLHTWNNDTCDAYADADTDWANGREHTGIDPNYGAYWVLELKPDYA
GTLGACGNFIIHVGTDDAGKELGGGDFTMPLSQDDPEFARMNFTFTDVASIFEFPIVSLGPQPVKIDGAAAHWIDGNTLL
WDIDPTAVSQVKLHYSANADLSVDVDTGLSGTAIELEEIELTDAQKARVPHLANMQAFAGDWSTDEAKEVVKTQALLASY
DAEGVLNGATQIQLANAIDALYTQGENDADEARLGAVYSDGGIQVNLWAPTAQSVSLKLFNDAKAETASYPMALDSNSGI
WRYEGGAELDRQLYRFEVTAYHPVTMLLETMLTTDPYSLSLSTNSRFSQFVNLNDEDLKPEGWETHEIPTISNPEDAVIY
EGHIRDFSVRDESTSAQHRGKYLAFTEQGSVPNQHLAKLVENGLTHFHVLPANDMATVEEDESQSVDLTSTVADLCRLNR
QAAVCDEENADATLQSVFDSYDAIAEPQKAQALTEQMRGDDRFNWGYDPYHFNVPEGSYATDADGVTRIKEMRAMNQSLH
EMGMRVALDVVYNHTNASGLNGKSVLDKVVPGYYHRYDTITGGIVRETCCDDTEPRNRMMEKFMQDSLVMWATQYKFDSF
RFDIMSQATKDTMLRLESAVKAVDEDNYFYGEGWIKEDRGYEQATQINMAGTQIGTYNDRIREAVRQGQIFSTEPSDSAL
AAQDNVKMSLAGTLTDYILEDYKGAASATSNIGGYATDPADIINYVSKHDNETLWDQLQYTLPNDMTLAERVRAQNIAAT
LPLMSQGIPFFQLGGDFLRSKSMDRNTYDAGDWFNYVDFTMNSNNWLVGLPLAQDNEGRWAEMANFIYSPERAASMTEIE
FASNVFNELLKIRSSSALFRLTTADDIIDRIGFHNIGARQTQGLIVMSIDDGIAADNAEAGENQTQRADIDPMADALVVI
VNSSSEQQTHGVPTAQGFELHSVLMNSVDSQVRGASFAQGEGDNEGKGMFTVPALTTAVFVKPQMGAQGVGLSAYATSGA
PDVVPYGSTSVFVRGAMNGWGEVDEMVYQGDGVYAAVISIEPGDYEFKVASADWSTVDFGSDNGDESVVLGADKTLTAGG
TNLQLSLSQARVLKFTLDASDKSAPVLTVDNEEPFFGTTVFVRGSLNGWGEDDPMDYAIGGQYSRTIEVTAGSYEFKVAS
ADWSTVDFGSADADVNVTVGQGKALAPGGSNMTVTFDYDGQYTFVFDASDKAAPTLSIFDAEMFGENTVFIRGGMNGWGE
VDALVFNADGSYTVDIAIDAGSYEFKIATGDWSTIDLGGVGDDTQVIVGQAKQLTYAGANLMIDIPTTATYRFSVVGPDP
SAPTVTVTQL

Sequences:
NA

Specific function: NA

COG id: COG1523

COG function: function code G; Type II secretory pathway, pullulanase PulA and related glycosidases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA