| Definition | Pseudoalteromonas atlantica T6c chromosome, complete genome. |
|---|---|
| Accession | NC_008228 |
| Length | 5,187,005 |
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Identifier: 109898099
GI number:
Start: 2136711
End: 2138999
Strand: Direct
Name: Not Available
Synonym: Patl_1779
Alternate gene names: NA
Gene position: NA
Preceding gene: 109898097
Following gene: 109898100
Centisome position: NA
GC content: NA
Gene sequence:
>2289_bases ATGGACGGAAGACTTTTCAGTTTTATTGCAGCAAGCATATCTGCGCTTTTCTGGTTGTCTCTGCCTGCGCTCGCCATTCT ACCAATAATTCTAACGCTTGCCATACTGCTTTGGCGTTTACCTAAGGGTAATTCAACCCTTTTGAGTATTAAATCTTTAA GTTGCAGCTTTCTACTCGGCATTTTTTGGATGGCAAGTGTAGGGCATTGGCAGCAAACTTGGCAACTACCATCAAGCGAT TTTACCCAAGGTGTGTGGGTTAAAGGGCAGGTGAAAAGTTTAATCGATGACGAAAATAGCGCACGATTTAACCTCAAGAT ATCCAGTATTGATGACAGGGCGTTAGCCAAGGATGTGCTAATCCGCCTCAGTTGGACGCAGCCAACATGGCGTTTAAAGC AAGGGCAGTTGGCTCAATTGTGGGTTAAGTTAAAGCCTCCTCATGGGCTGGCGAATCAAGGTGGTTTTCATTATCAGCAG TGGCTGTTTAGTCAAAGTGTTGTGGCAACGGGCTACGTAAAAACTAATGAAAACAATAGTCTAGTTGGATCTGATAGTTC TGTTCGCCAGCGTCTGCTCGACGATATTATGGCTTTAAAGCTGGATACAACGCCCTGGATTGCAGCGCTTTCTTTGGGGC ATAGAGGGCTACTGACACCTGATGATTGGTCTTTGGTACAACGGACTGGTATCGCCCATTTGATAGCAATATCTGGCCTA CATTTGGCCCTTGTAGGCAGTATTTGTTATTTGCTTATCGCCAGTATCTTACTTTTTTGTTACCGAGTGTTAATCAAGGG GCAAAACGCTAACTTCTATTTCATCAGCGTCTTCATCACGCTTATTACCACGCTAGGGTATGCCTATTTAGCAGGCTTCG GTTTACCAGCGCTACGGGCATGGCTTATGTTGGCGCTAACGGCCTTGCTTGTTTTTAGTTGCACCCATTGGGGGTTTGGA CGAATTTTGTTGGTAGGAGTGAGCGCATTTATTGTACTTTTTCCTTTGAGTCTTTTTGGTCAAAGCTTCTGGCTGAGTTT TGGAGCGGTCTCAATTATCGGCTTCGTATTTTGGCGCTGGCCGGTGCGCCATCGAGGATTTTCGATTAAAACCTGGTTTG CTAGTATGTGCCGTTTACAGCTGGCCCTAAGCCTCTTAATGCTGCCTTTGGTGGCGTGGCAGTTCTCATTTGTATCAGTC GTGTCGCCTGTCATCAATTTAGTGGCGGTTCCTGTTGTAACACTGATCATTGTGCCCATGTGTTTGCTAGGAGTGATAAT GATGTTGCTATCCATACCGTACTGGAAACATGTATTTACCCTGGTGGATGTAGGGTTACAGTTTCTACTGGATAAACTCA GTCTAATGGAGAGTTGGTCCGGAGCCGCTTTTAGCATTCAAGCCATACCTGGGATTGTGTGGGTTTGCTTTACTATTGCA GCGCTAACTTTTTTGTTGCCAAGGGGGCTAATACCGCGCCTGCTAGCGCTGGTGCTTTGTATACCATTACTAACGTTTGG ACTCACCCCTGCCAAACGCGACTGGCAAATCAATGTGCTGGACGTGGGGCAGGGCTTATCGGTTGTGGTGCTCAAAGCTG ACAAAGCTTTGGTTTACGATGTAGGAGCGGCGTACCCCAGTGGGTTTAATATGGCCGATAGCGTGTTGTTGCCTTTTCTG AGAAGCAAAGGCTTGCGTGAAGTGAGTGCGCTCGTTGTGAGTCATTTTGATAATGACCACAGCGGCAGTTTGCCGGCGCT ACGTCAGAAAATGGCGATAGAGACCCTGTTCACCACACAAGACTTGTGTAGGCAAAATTGGCAGCTCACGTGGCAAGGGC TGAGCGTCAAGGCCTTGTGGCCAGACGACCCGAATTTGTATAGCGATAACAATAGTTCTTGCGTACTGCGAATTAGCGAC GGTGATTTTAGTCTGTTGTTAACTGGGGATATAGACGCCTCGGTAGAGGCAAAGTTAATAGCCGGTTACGGCACAGCTTT ACGATCGGATGTGCTAATTGCCCCTCATCATGGCAGTAATACCTCTTCCTCTAGGGTATTTATTGATACGGTAAAGCCCG ACTTTGTTGTGTTCAGTCAAGGGTTCATGAATCGGTGGGGATTTCCAAAAACGGCCGTGGTAGAGCGGTATCAACAAACA GATGCACAGCTGTATCGCACATCAAAGCATGGGCAGGTTCAAATAAGCATTAACGACAGTGGCGCTCAGGTGAGTACATT TCGCCAGAATATCTCCCCATACTGGTATGCAAATCAGACAATTGATTGA
Upstream 100 bases:
>100_bases TTTAATTTTATGATGGTCCGGTAAAAAGCGTTTAATGAACTTTTTCAGCATGATTCCCTATAATGTGTTGAGAAGTGATC TACAGGATGTGCTTAGCACT
Downstream 100 bases:
>100_bases AAACTGAGCATTAAATAATTGATAGTTGGGGATTTTCACCTCAACAGTTACAATATCCCTGTGTAACCTTAACTAAGTCG AATTCTAACGCCTTCATGAC
Product: DNA internalization-related competence protein ComEC/Rec2
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>762_residues MDGRLFSFIAASISALFWLSLPALAILPIILTLAILLWRLPKGNSTLLSIKSLSCSFLLGIFWMASVGHWQQTWQLPSSD FTQGVWVKGQVKSLIDDENSARFNLKISSIDDRALAKDVLIRLSWTQPTWRLKQGQLAQLWVKLKPPHGLANQGGFHYQQ WLFSQSVVATGYVKTNENNSLVGSDSSVRQRLLDDIMALKLDTTPWIAALSLGHRGLLTPDDWSLVQRTGIAHLIAISGL HLALVGSICYLLIASILLFCYRVLIKGQNANFYFISVFITLITTLGYAYLAGFGLPALRAWLMLALTALLVFSCTHWGFG RILLVGVSAFIVLFPLSLFGQSFWLSFGAVSIIGFVFWRWPVRHRGFSIKTWFASMCRLQLALSLLMLPLVAWQFSFVSV VSPVINLVAVPVVTLIIVPMCLLGVIMMLLSIPYWKHVFTLVDVGLQFLLDKLSLMESWSGAAFSIQAIPGIVWVCFTIA ALTFLLPRGLIPRLLALVLCIPLLTFGLTPAKRDWQINVLDVGQGLSVVVLKADKALVYDVGAAYPSGFNMADSVLLPFL RSKGLREVSALVVSHFDNDHSGSLPALRQKMAIETLFTTQDLCRQNWQLTWQGLSVKALWPDDPNLYSDNNSSCVLRISD GDFSLLLTGDIDASVEAKLIAGYGTALRSDVLIAPHHGSNTSSSRVFIDTVKPDFVVFSQGFMNRWGFPKTAVVERYQQT DAQLYRTSKHGQVQISINDSGAQVSTFRQNISPYWYANQTID
Sequences:
NA
Specific function: NA
COG id: COG2333
COG function: function code R; Predicted hydrolase (metallo-beta-lactamase superfamily)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA