Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109898100

GI number:

Start: 2139095

End: 2140852

Strand: Direct

Name: Not Available

Synonym: Patl_1780

Alternate gene names: NA

Gene position: NA

Preceding gene: 109898099

Following gene: 109898101

Centisome position: NA

GC content: NA

Gene sequence:

>1758_bases
ATGACTCATACTTTACCTACGCAAAATGTGTTCAAACGCTTCGCCGTTTACCTAAAAGACTTCAAGCTTGCCTTTGGTGT
AGCGATTATTGGCATGGTCGGGTACTCCCTGATCGATGCTTATGTGATTTCCTTGCTGCAACCTATTATTGATGGCAATG
GGGGCAAGTGGGATTACGATTATCTGCGCATAGCTGCTTATTTTGTTATCCCCGTTTTTATCGCCCGTGGCATATTTAAT
TTTATGGGTACCTATACCTTGTCTTGGATATCAAGCCAGGTGGTGATGAAGATGCGCGAGCAATTGTTTCATCAGTACAT
GCATTTGCCCGTTGAGTTTCACGATCATCATCCCTCTGGGCAGCTTATCTCAAAAGTTATTTACGATACCGAGCAAGTCG
CTGGCGCAGCAGGCAAAGCGTTCTTAACCTTGGTCAGAGAAGGCGCGTTGGTCTTTGGCTTATTATTTTGGATGTTCTAT
CATTCTTGGCAGTTGTCGTTAGTCTTTATTTTGATTGGCCCGCTTGTGGCCATGATTGTATCTGTTGTGAGCAAGCGATT
TCGTCTGGTGAGTAAAAATATTCAGCAAGCCATGGGTAACTTAACATCCTCTGCAGAGCAAATTATTAAAGGCCACAAAG
TGGTATTGATGTTTGGCGGGCAAGATTTAGAAGCCTCGCGTTTCGCTAAAAAGAACAACAATAATCGTCAGCAGAATATG
AAGCTGGTAATTGCGCAAATTCTCAGTGTGTCATCGATTCAAGTGATTGCCTCTGTTGCACTGGCCGTCGTGTTATACAT
CTCTAGTAAACCGAATTTCATCACTGATTTAACTCCTGGAACGTTTGTAACCGTCGTGGTGGCTATGACCATGCTACTTA
AACCGTTGAAACAGCTCACCACGGTAAACAGTGAGTTTCAAAAAGGCATGGCTGCATGCGTGAGTATCTTCTCAGTGCTA
GACAATGCTATAGAAAAAGATACCGGCAGCAAAGTGCTAGACAAAGCCAAGGGCAAATTAGAGTTCAGAGACGTGACCTT
CCATTATCCTAATAAGGAAGAGGCCGCGTTATCGGATATGTCATTCACGGTAGAGCCAGGGAAAACCTTTGCTCTGGTAG
GGCGTTCAGGCAGTGGTAAATCAACCATATCGAGCCTATTAACTCGTTTTTATGATGCGCAGCAAGGGACTATCTTACTC
GACGATGTGCCATTGCAAGATTTCAAACTGAAGGATTTACGTCGCCAGTTTGCGCTAGTGTCTCAGCACGTCACACTTTT
TAACGATACGATTGCTAATAACATTGCTTACGGCTCAGAAGGGCGCGTTACCCCCGAGCAAGTGTTGGCTGCGGCAAAAA
CTGCCCACGCTTTAGAATTTATAGAGCAGTTACCCAACGGCATGGAAACACTCATCGGTGAAAATGGCTTGATGCTGTCT
GGCGGACAACGTCAACGTTTGGCCATTGCCCGTGCTGTGCTGCTTGATGCACCTGTGCTTATTCTTGATGAGGCAACATC
GGCGCTTGATACGGAGTCAGAGCGATTGATCCAGGATGCGCTCGAAACGCTGCAGCAAGATCGTACCAGCATTGTTGTGG
CTCATCGCTTATCTACCATTGAAAGTGCCGATCAGATATTGGTTATTGAGAGAGGGCGTATTTTAGAGCAGGGGGATCAT
GCTTCGTTATTATCCGAGGACGGCGCGTATGCTCAGCTACATAAATTACAATTCGGCGACGGGCAAACTGACGCGTGA

Upstream 100 bases:

>100_bases
ATTGAAAACTGAGCATTAAATAATTGATAGTTGGGGATTTTCACCTCAACAGTTACAATATCCCTGTGTAACCTTAACTA
AGTCGAATTCTAACGCCTTC

Downstream 100 bases:

>100_bases
GATGGATAGAGCGTGTTTGGTATCAGCAACCTTGGTACAAATGGCCGAGCATTCTGTTATTAATGCCATTGACTGTGCTC
TTCTGGCTGATTTCTAAGGC

Product: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>585_residues
MTHTLPTQNVFKRFAVYLKDFKLAFGVAIIGMVGYSLIDAYVISLLQPIIDGNGGKWDYDYLRIAAYFVIPVFIARGIFN
FMGTYTLSWISSQVVMKMREQLFHQYMHLPVEFHDHHPSGQLISKVIYDTEQVAGAAGKAFLTLVREGALVFGLLFWMFY
HSWQLSLVFILIGPLVAMIVSVVSKRFRLVSKNIQQAMGNLTSSAEQIIKGHKVVLMFGGQDLEASRFAKKNNNNRQQNM
KLVIAQILSVSSIQVIASVALAVVLYISSKPNFITDLTPGTFVTVVVAMTMLLKPLKQLTTVNSEFQKGMAACVSIFSVL
DNAIEKDTGSKVLDKAKGKLEFRDVTFHYPNKEEAALSDMSFTVEPGKTFALVGRSGSGKSTISSLLTRFYDAQQGTILL
DDVPLQDFKLKDLRRQFALVSQHVTLFNDTIANNIAYGSEGRVTPEQVLAAAKTAHALEFIEQLPNGMETLIGENGLMLS
GGQRQRLAIARAVLLDAPVLILDEATSALDTESERLIQDALETLQQDRTSIVVAHRLSTIESADQILVIERGRILEQGDH
ASLLSEDGAYAQLHKLQFGDGQTDA

Sequences:
NA

Specific function: NA

COG id: COG1132

COG function: function code V; ABC-type multidrug transport system, ATPase and permease components

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA