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The map label for this gene is insK [C]

Identifier: 162139373

GI number: 162139373

Start: 2932629

End: 2933438

Strand: Direct

Name: insK [C]

Synonym: RD1_3063

Alternate gene names: 162139373

Gene position: 2932629-2933438 (Clockwise)

Preceding gene: 110680253

Following gene: 110680259

Centisome position: 70.95

GC content: 60.0

Gene sequence:

>810_bases
ATGTGTTCGTTCAAAGGCTACAATCGACGTCGCGCTTGTACGTTGGCGGGGATTGATCCGCGTTTGTACCGACGGACGTC
GAAGCGTCCAGTGGACATAGCGCTGCGTACAAGGGTGAAGCAACTTGCTTCTGAGCGGCGCCGGTTCGGCTATCGACGGC
TGCACATCCTGCTAAAGCGAGAGGGCGGGGAGGTGAACTGGAAGAAGCTGTACCTGCTCCACCGCGAAGAAGGGTTAACC
GTTCGTAAATGGGGCGGTCGCAAGCGTGCTGTCGGGACGCGGGCGCTCATGGCAATCCCGCAGGGCCCAAACCAACGGTG
GTCGCTCGACTTCATGTTGGACGCGCATGAAGACGGGCGGCGGTACAGGGTGCTGAATGTCATCGACGACTTCAGCCAGG
AATGCCTGGCCGCCGTAGTCGACACATCCATTGACGGTGCGCATGTCGCCCGTGAGCTGGACCGGATCGCCGAGTTGCGA
GGCTATCCATGCCTTGTGGTCAGCGACAACGGGGCGGAGCTGACCTCGAACGTGATGCTCAAATGGCAAGAGGATCGCAA
GGTCGACTGGCACTATATCGCACCCGGAAAGCCCATGCAGAACGGCCTGGTGGAAAGCTTCAACGCACGGATGAGCGAGG
AGTGCCTGAACGAGCACCTGTTCCCGTCTCTGCGCCATGCCCGCCACATGATTGCGGCAAGGCGCGCCGGCTACAATCAC
CAACGCCCACATTCAAGCCTCGACGGGCTCACCCCGTGGGAGTACCACCAACGGTCAAGAGAGGACCAAAACCTGAACAG
AGCTAACTAA

Upstream 100 bases:

>100_bases
GGCCGGGGCCAGCCCGCCGAGTAATGTGTATGGTCGTTCTGTGTTGTAGCCGGTCCTCCAGTTTTCGATGATTTTCCGGG
CTTCGGCGAGATTGCCGAAG

Downstream 100 bases:

>100_bases
AAAACGCGAACTCTCAGGGGGGCAGGTCACTGACATTTACCGTGGGCATCCGGCGTACCTGAATAATCTGATCCAGCTCG
CGTGTCTGCCGCGCGCCAGA

Product: integrase catalytic subunit

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MCSFKGYNRRRACTLAGIDPRLYRRTSKRPVDIALRTRVKQLASERRRFGYRRLHILLKREGGEVNWKKLYLLHREEGLT
VRKWGGRKRAVGTRALMAIPQGPNQRWSLDFMLDAHEDGRRYRVLNVIDDFSQECLAAVVDTSIDGAHVARELDRIAELR
GYPCLVVSDNGAELTSNVMLKWQEDRKVDWHYIAPGKPMQNGLVESFNARMSEECLNEHLFPSLRHARHMIAARRAGYNH
QRPHSSLDGLTPWEYHQRSREDQNLNRAN

Sequences:

>Translated_269_residues
MCSFKGYNRRRACTLAGIDPRLYRRTSKRPVDIALRTRVKQLASERRRFGYRRLHILLKREGGEVNWKKLYLLHREEGLT
VRKWGGRKRAVGTRALMAIPQGPNQRWSLDFMLDAHEDGRRYRVLNVIDDFSQECLAAVVDTSIDGAHVARELDRIAELR
GYPCLVVSDNGAELTSNVMLKWQEDRKVDWHYIAPGKPMQNGLVESFNARMSEECLNEHLFPSLRHARHMIAARRAGYNH
QRPHSSLDGLTPWEYHQRSREDQNLNRAN
>Mature_269_residues
MCSFKGYNRRRACTLAGIDPRLYRRTSKRPVDIALRTRVKQLASERRRFGYRRLHILLKREGGEVNWKKLYLLHREEGLT
VRKWGGRKRAVGTRALMAIPQGPNQRWSLDFMLDAHEDGRRYRVLNVIDDFSQECLAAVVDTSIDGAHVARELDRIAELR
GYPCLVVSDNGAELTSNVMLKWQEDRKVDWHYIAPGKPMQNGLVESFNARMSEECLNEHLFPSLRHARHMIAARRAGYNH
QRPHSSLDGLTPWEYHQRSREDQNLNRAN

Specific function: Involved in the transposition of the insertion sequence is150 [C]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 31369; Mature: 31369

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCSFKGYNRRRACTLAGIDPRLYRRTSKRPVDIALRTRVKQLASERRRFGYRRLHILLKR
CCCCCCCCCCCEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEEEEC
EGGEVNWKKLYLLHREEGLTVRKWGGRKRAVGTRALMAIPQGPNQRWSLDFMLDAHEDGR
CCCCCCEEEEEEEECCCCCEEEECCCCCHHCCCEEEEECCCCCCCCEEEEEEEECCCCCC
RYRVLNVIDDFSQECLAAVVDTSIDGAHVARELDRIAELRGYPCLVVSDNGAELTSNVML
EEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEE
KWQEDRKVDWHYIAPGKPMQNGLVESFNARMSEECLNEHLFPSLRHARHMIAARRAGYNH
EECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
QRPHSSLDGLTPWEYHQRSREDQNLNRAN
CCCCCCCCCCCCHHHHHHCCHHCCCCCCC
>Mature Secondary Structure
MCSFKGYNRRRACTLAGIDPRLYRRTSKRPVDIALRTRVKQLASERRRFGYRRLHILLKR
CCCCCCCCCCCEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEEEEC
EGGEVNWKKLYLLHREEGLTVRKWGGRKRAVGTRALMAIPQGPNQRWSLDFMLDAHEDGR
CCCCCCEEEEEEEECCCCCEEEECCCCCHHCCCEEEEECCCCCCCCEEEEEEEECCCCCC
RYRVLNVIDDFSQECLAAVVDTSIDGAHVARELDRIAELRGYPCLVVSDNGAELTSNVML
EEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEE
KWQEDRKVDWHYIAPGKPMQNGLVESFNARMSEECLNEHLFPSLRHARHMIAARRAGYNH
EECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
QRPHSSLDGLTPWEYHQRSREDQNLNRAN
CCCCCCCCCCCCHHHHHHCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]