Click here to switch to the map view.

The map label for this gene is 110681135

Identifier: 110681135

GI number: 110681135

Start: 3863570

End: 3864370

Strand: Direct

Name: 110681135

Synonym: RD1_4008

Alternate gene names: NA

Gene position: 3863570-3864370 (Clockwise)

Preceding gene: 110681134

Following gene: 110681136

Centisome position: 93.48

GC content: 59.68

Gene sequence:

>801_bases
TTGACACATGGACTGTTTGTGGACCTCCTTATCAAGACACATCTGAGATACGCCGTCCCGCAACCAAGCGATCTGCTGTT
GCAGATCGAGGTGCTGTCAGACGCGCAGCAAACCTGCCGCCACACGCGCCTGCACCTGAACAAGGACCTGCCGCAACGCG
AGATACCCGGCGCTGACACCGCCGGCCCACGCCGTTGGGTACAGTGTGACGCGCTGTTTGACTGCCGCTATGAAACGCAG
GTGCGCATCATGCGACACGAGGCCCCCATCGAAACCCTGCCCGAAACGCCACGCCTTGCAATCCCCGGAGATGTCATTCC
GTATATGATGCCCTCGCGCTATTGCCAGTCGGACCTGTTTCTGGATTTCGTCGCGACCCGGTTTGCGGATTTGACCGGCG
GTGCATTGGTCAACGCGCTCAGCACATGGGTCAGCACGCATTTCACCTATGACAATAGCGTCAGCCATTCAGGAACTACC
GCCACAGACAGCTTCGCCAGCCTCTCCGGCGTTTGCCGTGATTATGCCCATGTGCTGATCGCTCTGGCGCGCGCGGGCGG
CATTCCCGCAAGGTTTGTCAGCGCATATGCACCGGACGTCAGGCCGCAGGACTTTCACGCCCTCGTTGAGGTCCACCTCG
CTGGCGACTGGCATATCGTTGACCCCACGGGCATGGCACGCCCGTCAGAGGTTGCGAAAATCTGCGTGGGGCGCGATGCA
GGGGATGCGTCATTTCTCACATCTTACGGGGCAATCGACCTCATCGAGCAATCGGTCGATGTGGTTCGTCTACCCACTTA
A

Upstream 100 bases:

>100_bases
ACGCGTGATCCAAGGGGACCGCGAAACGCTTTGCCAACCCCGAAGTGTCGGCGGTCGACAAAGGCGCAAGGGCTGGGATA
GGGAACGGGGCCGACCCTCT

Downstream 100 bases:

>100_bases
CACAGATTTCCCCCTTGGATTCACGGAATACAAAGGAATTAAAGATTGTATCCGCCTGGTTTCAGCACTAACTAGAAACG
TCGGATGATCGGGTGTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Transglutaminase Domain Protein; Transglutaminase-Like; Transglutaminase Family Protein; Transglutaminase-Like Protein; Transglutaminase-Like Superfamily Protein; Transglutaminase-Like Domain-Containing Protein; Cysteine Protease Transglutaminase-Like Protein; Transglutaminase-Like S Cysteine Proteases; Protease Transglutaminase-Like; Cysteine Protease; Transglutaminase/Protease-Like Protein; Transglutaminase/Protease; Transglutaminase-Like S Cysteine Protease; Transglutaminase-Like Cysteine Protease; Transglutaminase; Cystein Protease

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MTHGLFVDLLIKTHLRYAVPQPSDLLLQIEVLSDAQQTCRHTRLHLNKDLPQREIPGADTAGPRRWVQCDALFDCRYETQ
VRIMRHEAPIETLPETPRLAIPGDVIPYMMPSRYCQSDLFLDFVATRFADLTGGALVNALSTWVSTHFTYDNSVSHSGTT
ATDSFASLSGVCRDYAHVLIALARAGGIPARFVSAYAPDVRPQDFHALVEVHLAGDWHIVDPTGMARPSEVAKICVGRDA
GDASFLTSYGAIDLIEQSVDVVRLPT

Sequences:

>Translated_266_residues
MTHGLFVDLLIKTHLRYAVPQPSDLLLQIEVLSDAQQTCRHTRLHLNKDLPQREIPGADTAGPRRWVQCDALFDCRYETQ
VRIMRHEAPIETLPETPRLAIPGDVIPYMMPSRYCQSDLFLDFVATRFADLTGGALVNALSTWVSTHFTYDNSVSHSGTT
ATDSFASLSGVCRDYAHVLIALARAGGIPARFVSAYAPDVRPQDFHALVEVHLAGDWHIVDPTGMARPSEVAKICVGRDA
GDASFLTSYGAIDLIEQSVDVVRLPT
>Mature_265_residues
THGLFVDLLIKTHLRYAVPQPSDLLLQIEVLSDAQQTCRHTRLHLNKDLPQREIPGADTAGPRRWVQCDALFDCRYETQV
RIMRHEAPIETLPETPRLAIPGDVIPYMMPSRYCQSDLFLDFVATRFADLTGGALVNALSTWVSTHFTYDNSVSHSGTTA
TDSFASLSGVCRDYAHVLIALARAGGIPARFVSAYAPDVRPQDFHALVEVHLAGDWHIVDPTGMARPSEVAKICVGRDAG
DASFLTSYGAIDLIEQSVDVVRLPT

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29342; Mature: 29210

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHGLFVDLLIKTHLRYAVPQPSDLLLQIEVLSDAQQTCRHTRLHLNKDLPQREIPGADT
CCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
AGPRRWVQCDALFDCRYETQVRIMRHEAPIETLPETPRLAIPGDVIPYMMPSRYCQSDLF
CCCCCEEEECCEECCCCHHHEEEECCCCCHHHCCCCCCEECCCCHHHHHCCHHHHHHHHH
LDFVATRFADLTGGALVNALSTWVSTHFTYDNSVSHSGTTATDSFASLSGVCRDYAHVLI
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ALARAGGIPARFVSAYAPDVRPQDFHALVEVHLAGDWHIVDPTGMARPSEVAKICVGRDA
HHHHCCCCHHHHHHHHCCCCCCCHHEEEEEEEECCCEEEECCCCCCCHHHHHHHHHCCCC
GDASFLTSYGAIDLIEQSVDVVRLPT
CCHHHHHHCCHHHHHHHCCCEEECCC
>Mature Secondary Structure 
THGLFVDLLIKTHLRYAVPQPSDLLLQIEVLSDAQQTCRHTRLHLNKDLPQREIPGADT
CCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
AGPRRWVQCDALFDCRYETQVRIMRHEAPIETLPETPRLAIPGDVIPYMMPSRYCQSDLF
CCCCCEEEECCEECCCCHHHEEEECCCCCHHHCCCCCCEECCCCHHHHHCCHHHHHHHHH
LDFVATRFADLTGGALVNALSTWVSTHFTYDNSVSHSGTTATDSFASLSGVCRDYAHVLI
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ALARAGGIPARFVSAYAPDVRPQDFHALVEVHLAGDWHIVDPTGMARPSEVAKICVGRDA
HHHHCCCCHHHHHHHHCCCCCCCHHEEEEEEEECCCEEEECCCCCCCHHHHHHHHHCCCC
GDASFLTSYGAIDLIEQSVDVVRLPT
CCHHHHHHCCHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA