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The map label for this gene is 110681136

Identifier: 110681136

GI number: 110681136

Start: 3864490

End: 3865224

Strand: Direct

Name: 110681136

Synonym: RD1_4009

Alternate gene names: NA

Gene position: 3864490-3865224 (Clockwise)

Preceding gene: 110681135

Following gene: 110681143

Centisome position: 93.5

GC content: 55.65

Gene sequence:

>735_bases
ATGACCTACTGTGTCGGCCTGCGCTTGCGCCGTGGCCTCGTTTTCATGTCGGATACCCGCACCAACGCAGGTGTGGACAA
TTTTTCGACCACCAAAAAGATGTTTACCTGGGAAGTGCCGGGGGAGCGCGTGATCACTCTGATGACCGCCGGTAATCTTG
CGACGACGCAGGCGCTGATCAGTTTGCTGGAAGAAAGGTCAAAAACACCATCCGAACGCAGCCCGTCAATCCTTGAACGG
CCCACCATGTTCGAGGTTGCGCGTCTGGTTGGTGCGACACTGAAGGAAGTGATCGCAGACACCGCCGGGACAGGTCAGGT
CGCGTCGTCTCAGTTCAAAGCCTCGGTGATCGTCGGCGGTCAGGTCAAAGGCGGCCTGCCGACGCTGTTTTTGATATACC
CTGAGGGGAATTTCATCGAAGTGACCGAGGATTCGCCCTTTTTCCAGATCGGCGAGGCAAAATACGGCAAGCCCATCCTC
GTGCGCGCCTATGATCCCGACCTGAGTTTCGAAGATACGATCCGGCTTTTGATGGTTTCATTCGATTCGACCATCAAGGC
GAACCTGTCGGTCGGACTGCCGCTAGACCTGCAAGTCTATGCAAACGACAGCTTCGCGATCAAGGAACAGTCCCGGGTTG
AAGCGGATGACGCTTATTTTCAGTCAATATCTGAGCGCTGGGGCGACGCGTTGCGCAAGGCTTTGTCGGATTTGCCGCCC
TATAAAAGCCTTTGA

Upstream 100 bases:

>100_bases
TTCACGGAATACAAAGGAATTAAAGATTGTATCCGCCTGGTTTCAGCACTAACTAGAAACGTCGGATGATCGGGTGTGTT
GCCCCTGTTTTGGATCTTAA

Downstream 100 bases:

>100_bases
GGGCGTTGGATATGGGTTGCCCGTCCGCTGGATGGCTGAGCCAATCCGCCGTGATACCGGGACGTATCAGCAATGTCGAA
GACTTGGCAGGGGCTGAGGG

Product: proteasome-type protease, putative

Products: NA

Alternate protein names: Proteasome-Type Protease; 20S Proteasome A/B Subunit; Peptidase T1 Family; 20S Proteasome A And Subunit Bs; Peptidase T1A Family; T1 Family Peptidase; 20S Proteasome Subunits A/B; A And B-Type Proteasome Family Protein; Proteasome-Type Protease-Like Protein; Proteasome Protease; T1A Family Peptidase; Proteasome A-Type And B-Type Family Protein; Proteasome Alpha-1 Subunit; 20S Proteasome A And B Subunit

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MTYCVGLRLRRGLVFMSDTRTNAGVDNFSTTKKMFTWEVPGERVITLMTAGNLATTQALISLLEERSKTPSERSPSILER
PTMFEVARLVGATLKEVIADTAGTGQVASSQFKASVIVGGQVKGGLPTLFLIYPEGNFIEVTEDSPFFQIGEAKYGKPIL
VRAYDPDLSFEDTIRLLMVSFDSTIKANLSVGLPLDLQVYANDSFAIKEQSRVEADDAYFQSISERWGDALRKALSDLPP
YKSL

Sequences:

>Translated_244_residues
MTYCVGLRLRRGLVFMSDTRTNAGVDNFSTTKKMFTWEVPGERVITLMTAGNLATTQALISLLEERSKTPSERSPSILER
PTMFEVARLVGATLKEVIADTAGTGQVASSQFKASVIVGGQVKGGLPTLFLIYPEGNFIEVTEDSPFFQIGEAKYGKPIL
VRAYDPDLSFEDTIRLLMVSFDSTIKANLSVGLPLDLQVYANDSFAIKEQSRVEADDAYFQSISERWGDALRKALSDLPP
YKSL
>Mature_243_residues
TYCVGLRLRRGLVFMSDTRTNAGVDNFSTTKKMFTWEVPGERVITLMTAGNLATTQALISLLEERSKTPSERSPSILERP
TMFEVARLVGATLKEVIADTAGTGQVASSQFKASVIVGGQVKGGLPTLFLIYPEGNFIEVTEDSPFFQIGEAKYGKPILV
RAYDPDLSFEDTIRLLMVSFDSTIKANLSVGLPLDLQVYANDSFAIKEQSRVEADDAYFQSISERWGDALRKALSDLPPY
KSL

Specific function: Unknown

COG id: COG3484

COG function: function code O; Predicted proteasome-type protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26881; Mature: 26750

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYCVGLRLRRGLVFMSDTRTNAGVDNFSTTKKMFTWEVPGERVITLMTAGNLATTQALI
CEEEEEEEECCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHHH
SLLEERSKTPSERSPSILERPTMFEVARLVGATLKEVIADTAGTGQVASSQFKASVIVGG
HHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEECC
QVKGGLPTLFLIYPEGNFIEVTEDSPFFQIGEAKYGKPILVRAYDPDLSFEDTIRLLMVS
EECCCCCEEEEEECCCCEEEEECCCCCEEECCCCCCCEEEEEEECCCCCHHHHHEEEEEE
FDSTIKANLSVGLPLDLQVYANDSFAIKEQSRVEADDAYFQSISERWGDALRKALSDLPP
CCCCEEECEEECCCEEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
YKSL
CCCC
>Mature Secondary Structure 
TYCVGLRLRRGLVFMSDTRTNAGVDNFSTTKKMFTWEVPGERVITLMTAGNLATTQALI
EEEEEEEECCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHHH
SLLEERSKTPSERSPSILERPTMFEVARLVGATLKEVIADTAGTGQVASSQFKASVIVGG
HHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEECC
QVKGGLPTLFLIYPEGNFIEVTEDSPFFQIGEAKYGKPILVRAYDPDLSFEDTIRLLMVS
EECCCCCEEEEEECCCCEEEEECCCCCEEECCCCCCCEEEEEEECCCCCHHHHHEEEEEE
FDSTIKANLSVGLPLDLQVYANDSFAIKEQSRVEADDAYFQSISERWGDALRKALSDLPP
CCCCEEECEEECCCEEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
YKSL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA