Click here to switch to the map view.

The map label for this gene is 110681039

Identifier: 110681039

GI number: 110681039

Start: 3768296

End: 3769336

Strand: Direct

Name: 110681039

Synonym: RD1_3901

Alternate gene names: NA

Gene position: 3768296-3769336 (Clockwise)

Preceding gene: 110681038

Following gene: 110681040

Centisome position: 91.17

GC content: 66.19

Gene sequence:

>1041_bases
GTGAACATACGAGACGCGTTTGCCGATCAGGCGATCAGCTGCGCGCGCCTTGGTTCGCCCTTCATGGGACAACTGCTGGG
CATTCTTGCGGATCACTGGCCTGCCGACAGCCGGTTGGGCCGGTATTTTGCGAACTTCGGCGGAGATATTGGCCCGGCTG
GTGCCTCCCTGCCGCTGCGCATTGCGGGCGGATTGCATGCGCTGGTGCTGAGTGACCGCGCACCTGCGCTGACGCGGGTC
TATCCCCCGCACCAGAGCGAAGATACGCTGCTGCGTGACGCGGTGCTGCAAGCGCTGCGTACCCACGAGGTCTTTCTGCT
CGATTGGGTGCAAAGCCCGCCGCAAACCAATGAGGTACGTCGCAGCGCTGCGCTGATGCCCGGCGCGGCGGTGGCTGCGA
CCTATTTCGATCTGCCGGTCTACCTGTCCGAGCTTGGCGCGAGCGGGGGGCTGAACCTCATGTGGGACCGCTTTGATGTG
GCGCTGCCGGAGGGGCGCTTCGGCGTGCGAGCGCCCGCACTTACCCTGCGCCCGCAATGGGACGGGCCGATGCCCCCGCA
ACGCTTGCCACAGATCGCAGAGCGCGCGGGCGTTGACCTCAACCCGCTCGACCCCCGCGACCCTGCGGACCTGCTGCGCC
TGACCGCTTTTCTGTGGCCGGACCAACCTGAGCGGCTGGCCTTGACCAAAGCAGCCGCATCGGTTGCCTGCACAAAGATG
GAGCGCGGTGATGCCATCGACTGGCTGGAAAAACGGCTGGCAGACGCGCCAGACCATCACATGCACCTGATCCAGCACAC
CGTGGCGTGGCAGTATTTCCCCAGCGCCGCGCAGGCCCGAGGCCGCGCCCTGATCGAAGCGGCCGGTGCGCAGGCCACGC
AAACGCGCCCCCTTGCGTGGCTTTCACTGGAAACCGATGGCGATACCAAAGGCGCATTGGGCGCGGCGCTGACCCTCAGG
CTATGGCCGGGCGACAGAACGCTGTACCTTGGTCGCGCGGATTTTCATGGCCGATGGGTCAAATGGGCGGGCGCGACCTG
A

Upstream 100 bases:

>100_bases
ACAAACCACCCGCGCCCGCAAAACAACAGGCGACGGCGACCAAGGCAGAACCCGAACCCGACACGCGTTCTGCACTGCAA
AAGCTGATGGAACGCTTCAA

Downstream 100 bases:

>100_bases
TGCGCCGCTTTGGAAAATGGCTGGGGCGCGTCTTGCTGGCCGCCCTCTGCGCGGCACTCGTCATAGGCCTTTGGAAGGGC
GAGGAAATCAAGCGCCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MNIRDAFADQAISCARLGSPFMGQLLGILADHWPADSRLGRYFANFGGDIGPAGASLPLRIAGGLHALVLSDRAPALTRV
YPPHQSEDTLLRDAVLQALRTHEVFLLDWVQSPPQTNEVRRSAALMPGAAVAATYFDLPVYLSELGASGGLNLMWDRFDV
ALPEGRFGVRAPALTLRPQWDGPMPPQRLPQIAERAGVDLNPLDPRDPADLLRLTAFLWPDQPERLALTKAAASVACTKM
ERGDAIDWLEKRLADAPDHHMHLIQHTVAWQYFPSAAQARGRALIEAAGAQATQTRPLAWLSLETDGDTKGALGAALTLR
LWPGDRTLYLGRADFHGRWVKWAGAT

Sequences:

>Translated_346_residues
MNIRDAFADQAISCARLGSPFMGQLLGILADHWPADSRLGRYFANFGGDIGPAGASLPLRIAGGLHALVLSDRAPALTRV
YPPHQSEDTLLRDAVLQALRTHEVFLLDWVQSPPQTNEVRRSAALMPGAAVAATYFDLPVYLSELGASGGLNLMWDRFDV
ALPEGRFGVRAPALTLRPQWDGPMPPQRLPQIAERAGVDLNPLDPRDPADLLRLTAFLWPDQPERLALTKAAASVACTKM
ERGDAIDWLEKRLADAPDHHMHLIQHTVAWQYFPSAAQARGRALIEAAGAQATQTRPLAWLSLETDGDTKGALGAALTLR
LWPGDRTLYLGRADFHGRWVKWAGAT
>Mature_346_residues
MNIRDAFADQAISCARLGSPFMGQLLGILADHWPADSRLGRYFANFGGDIGPAGASLPLRIAGGLHALVLSDRAPALTRV
YPPHQSEDTLLRDAVLQALRTHEVFLLDWVQSPPQTNEVRRSAALMPGAAVAATYFDLPVYLSELGASGGLNLMWDRFDV
ALPEGRFGVRAPALTLRPQWDGPMPPQRLPQIAERAGVDLNPLDPRDPADLLRLTAFLWPDQPERLALTKAAASVACTKM
ERGDAIDWLEKRLADAPDHHMHLIQHTVAWQYFPSAAQARGRALIEAAGAQATQTRPLAWLSLETDGDTKGALGAALTLR
LWPGDRTLYLGRADFHGRWVKWAGAT

Specific function: Unknown

COG id: COG4427

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37774; Mature: 37774

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRDAFADQAISCARLGSPFMGQLLGILADHWPADSRLGRYFANFGGDIGPAGASLPLR
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEE
IAGGLHALVLSDRAPALTRVYPPHQSEDTLLRDAVLQALRTHEVFLLDWVQSPPQTNEVR
ECCCEEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHH
RSAALMPGAAVAATYFDLPVYLSELGASGGLNLMWDRFDVALPEGRFGVRAPALTLRPQW
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECEEEECCCCCCCCCCCEEEECCCC
DGPMPPQRLPQIAERAGVDLNPLDPRDPADLLRLTAFLWPDQPERLALTKAAASVACTKM
CCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ERGDAIDWLEKRLADAPDHHMHLIQHTVAWQYFPSAAQARGRALIEAAGAQATQTRPLAW
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHCCCCCCCCCCEEE
LSLETDGDTKGALGAALTLRLWPGDRTLYLGRADFHGRWVKWAGAT
EEEECCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCEEEECCCC
>Mature Secondary Structure
MNIRDAFADQAISCARLGSPFMGQLLGILADHWPADSRLGRYFANFGGDIGPAGASLPLR
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEE
IAGGLHALVLSDRAPALTRVYPPHQSEDTLLRDAVLQALRTHEVFLLDWVQSPPQTNEVR
ECCCEEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHH
RSAALMPGAAVAATYFDLPVYLSELGASGGLNLMWDRFDVALPEGRFGVRAPALTLRPQW
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECEEEECCCCCCCCCCCEEEECCCC
DGPMPPQRLPQIAERAGVDLNPLDPRDPADLLRLTAFLWPDQPERLALTKAAASVACTKM
CCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ERGDAIDWLEKRLADAPDHHMHLIQHTVAWQYFPSAAQARGRALIEAAGAQATQTRPLAW
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHCCCCCCCCCCEEE
LSLETDGDTKGALGAALTLRLWPGDRTLYLGRADFHGRWVKWAGAT
EEEECCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA