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The map label for this gene is nylB [H]

Identifier: 110681040

GI number: 110681040

Start: 3769336

End: 3770523

Strand: Direct

Name: nylB [H]

Synonym: RD1_3903

Alternate gene names: 110681040

Gene position: 3769336-3770523 (Clockwise)

Preceding gene: 110681039

Following gene: 110681041

Centisome position: 91.2

GC content: 59.01

Gene sequence:

>1188_bases
ATGCGCCGCTTTGGAAAATGGCTGGGGCGCGTCTTGCTGGCCGCCCTCTGCGCGGCACTCGTCATAGGCCTTTGGAAGGG
CGAGGAAATCAAGCGCCTGATGGCAGTCAACAGCCTGTTTGAGCCAGACCTTATCGTCCGGAATTTCAGCAATATGGATG
CAGCATTCCTGCACACCCCCGTTGGAGAAGCCCAGACGCCGCCCTCTGCCCTGCCGGATGGTCCGAAAATGACCCTGCCC
GATGGCACAGCGGCATGGCTCGCCGCGCGCAAGGTCACATCTCTGGTGGTGCTGAGCAATGGGCAGCTGGTCCATGAAAG
CTATCATCTCGGCACCAAAGCCGAAGACAGGCGCATCAGTTGGTCGCTGGCCAAAAGCTATATCTCTGCCCTGACCGGCA
TCGTTTTGGCGCAAGGGTCCATCGCATCGCTTGATGATCCGGTGACGCGCTATGCACCGCGCCTGAAGGGCGGCGCCTAT
GACGGTGCCACGGTGCGCAATGTGCTGAATATGGCCACTGGCGTGACCTTTGACGAAGACTATACCGACTACGATTCCGA
CATAAACCGCATGGGGCGCGTGCTGGCGTTGGGCGGGCTGATGGATGATTTTGCCGCCGGACTTACGCAAACCTTCGCGC
GCCCCGGCAGTGAATGGCAATATGTGTCGATTGACACCCATGTGCTGGGCATGGTGATCCGTGCTGCGACGGGGCGGTCC
GTGGTCGACTTGATGGGGGCGCATATCATCACGCCGCTGGGTCTGGAAAGCACGCCCTACTATCTGACGGATGGCGCGGG
TGTGGCATTTGCCTTGGGCGGGTTGAACATGACCACGCGCGATTATGCGCGCTTTGGTCAGATGATGGCGCAACACGGGG
CATGGAACGGACGCCAGATCGTCCCGAAAAACTGGGTCATCGACTCCACCACTGCCTCGGCGCCAACCGGTCCGGATGAA
TACGGCTATGGCTATCAATGGTGGATGCCGCGTGACGCAAGACCGCGTGAATACATGGGACGTGGCATTTATGGCCAATA
CCTCTACATCAACGAGGAACAAGGGGTAGTTGTTGCGCTGACAGCAGCGGATGCCGCGTTTCGCGATGCGGACGTGCAGC
AACAGAACATCGCGCTGTTTCGTGAGATAGCCGATCGTGTGCAAGGAGATGCAAATGGAAAAAGATGA

Upstream 100 bases:

>100_bases
GCGCGGCGCTGACCCTCAGGCTATGGCCGGGCGACAGAACGCTGTACCTTGGTCGCGCGGATTTTCATGGCCGATGGGTC
AAATGGGCGGGCGCGACCTG

Downstream 100 bases:

>100_bases
CAGCATCAACGTATTGGGCGAACCGCTCGTGATCTGCGGCACCGACCCGGTCACGGGGTTCTTTCGCGACGGGTATTGCA
ACACCTGTGCTGCCGATCAG

Product: 6-aminohexanoate-dimer hydrolase, putative

Products: NA

Alternate protein names: Nylon oligomers-degrading enzyme EII' [H]

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MRRFGKWLGRVLLAALCAALVIGLWKGEEIKRLMAVNSLFEPDLIVRNFSNMDAAFLHTPVGEAQTPPSALPDGPKMTLP
DGTAAWLAARKVTSLVVLSNGQLVHESYHLGTKAEDRRISWSLAKSYISALTGIVLAQGSIASLDDPVTRYAPRLKGGAY
DGATVRNVLNMATGVTFDEDYTDYDSDINRMGRVLALGGLMDDFAAGLTQTFARPGSEWQYVSIDTHVLGMVIRAATGRS
VVDLMGAHIITPLGLESTPYYLTDGAGVAFALGGLNMTTRDYARFGQMMAQHGAWNGRQIVPKNWVIDSTTASAPTGPDE
YGYGYQWWMPRDARPREYMGRGIYGQYLYINEEQGVVVALTAADAAFRDADVQQQNIALFREIADRVQGDANGKR

Sequences:

>Translated_395_residues
MRRFGKWLGRVLLAALCAALVIGLWKGEEIKRLMAVNSLFEPDLIVRNFSNMDAAFLHTPVGEAQTPPSALPDGPKMTLP
DGTAAWLAARKVTSLVVLSNGQLVHESYHLGTKAEDRRISWSLAKSYISALTGIVLAQGSIASLDDPVTRYAPRLKGGAY
DGATVRNVLNMATGVTFDEDYTDYDSDINRMGRVLALGGLMDDFAAGLTQTFARPGSEWQYVSIDTHVLGMVIRAATGRS
VVDLMGAHIITPLGLESTPYYLTDGAGVAFALGGLNMTTRDYARFGQMMAQHGAWNGRQIVPKNWVIDSTTASAPTGPDE
YGYGYQWWMPRDARPREYMGRGIYGQYLYINEEQGVVVALTAADAAFRDADVQQQNIALFREIADRVQGDANGKR
>Mature_395_residues
MRRFGKWLGRVLLAALCAALVIGLWKGEEIKRLMAVNSLFEPDLIVRNFSNMDAAFLHTPVGEAQTPPSALPDGPKMTLP
DGTAAWLAARKVTSLVVLSNGQLVHESYHLGTKAEDRRISWSLAKSYISALTGIVLAQGSIASLDDPVTRYAPRLKGGAY
DGATVRNVLNMATGVTFDEDYTDYDSDINRMGRVLALGGLMDDFAAGLTQTFARPGSEWQYVSIDTHVLGMVIRAATGRS
VVDLMGAHIITPLGLESTPYYLTDGAGVAFALGGLNMTTRDYARFGQMMAQHGAWNGRQIVPKNWVIDSTTASAPTGPDE
YGYGYQWWMPRDARPREYMGRGIYGQYLYINEEQGVVVALTAADAAFRDADVQQQNIALFREIADRVQGDANGKR

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: =3.5.1.46 [H]

Molecular weight: Translated: 43125; Mature: 43125

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFGKWLGRVLLAALCAALVIGLWKGEEIKRLMAVNSLFEPDLIVRNFSNMDAAFLHTP
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCCCCHHEEECC
VGEAQTPPSALPDGPKMTLPDGTAAWLAARKVTSLVVLSNGQLVHESYHLGTKAEDRRIS
CCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHEEEEECCCCEEEEHHCCCCCCCCCHHH
WSLAKSYISALTGIVLAQGSIASLDDPVTRYAPRLKGGAYDGATVRNVLNMATGVTFDED
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
YTDYDSDINRMGRVLALGGLMDDFAAGLTQTFARPGSEWQYVSIDTHVLGMVIRAATGRS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCH
VVDLMGAHIITPLGLESTPYYLTDGAGVAFALGGLNMTTRDYARFGQMMAQHGAWNGRQI
HHHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEE
VPKNWVIDSTTASAPTGPDEYGYGYQWWMPRDARPREYMGRGIYGQYLYINEEQGVVVAL
CCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHCCCCEEEEEEEECCCCEEEEE
TAADAAFRDADVQQQNIALFREIADRVQGDANGKR
EECCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRRFGKWLGRVLLAALCAALVIGLWKGEEIKRLMAVNSLFEPDLIVRNFSNMDAAFLHTP
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCCCCHHEEECC
VGEAQTPPSALPDGPKMTLPDGTAAWLAARKVTSLVVLSNGQLVHESYHLGTKAEDRRIS
CCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHEEEEECCCCEEEEHHCCCCCCCCCHHH
WSLAKSYISALTGIVLAQGSIASLDDPVTRYAPRLKGGAYDGATVRNVLNMATGVTFDED
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
YTDYDSDINRMGRVLALGGLMDDFAAGLTQTFARPGSEWQYVSIDTHVLGMVIRAATGRS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCH
VVDLMGAHIITPLGLESTPYYLTDGAGVAFALGGLNMTTRDYARFGQMMAQHGAWNGRQI
HHHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEE
VPKNWVIDSTTASAPTGPDEYGYGYQWWMPRDARPREYMGRGIYGQYLYINEEQGVVVAL
CCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHCCCCEEEEEEEECCCCEEEEE
TAADAAFRDADVQQQNIALFREIADRVQGDANGKR
EECCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6646204; 6389532; 1879421 [H]