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The map label for this gene is fucU [H]

Identifier: 110681027

GI number: 110681027

Start: 3757369

End: 3757803

Strand: Direct

Name: fucU [H]

Synonym: RD1_3888

Alternate gene names: 110681027

Gene position: 3757369-3757803 (Clockwise)

Preceding gene: 110681017

Following gene: 110681031

Centisome position: 90.91

GC content: 59.31

Gene sequence:

>435_bases
ATGCTTATCGGAATCGACCCTGTTCTGACCCCGGACCTGTTGCGCCATCTCGGGGCCATGGGCCACGGAGATCAACTCGT
GATTGCAGATGCAAACTTCCCGGCCGAATCCTGTGCAAACCGGATTGAACGTCTGGCCGGGGCCAGCGCGACCGAAGCGC
TGCGCGCGATCCTGTCCGTCATGCCGCTGGACACATATGTGGATGCCCCGGCCCGGTCGATGCAGGTGGTTGGGGATCCA
GAGGCTGTCCCGGATATCGTGGCAGAGTTCCAGCGCATCATTGATGAGGTGGCCGACCACCCCGCGCAGATACAATCCGT
GGAACGGCACGAATTCTACCGGGAGGCCAAAAAGACCTACTGCGTTGTCCAAACGTCAGAGAACCGCTTTTACGGCAATA
TCATCCTGTCCAAAGGCGCCATTGCTCCAAGCTGA

Upstream 100 bases:

>100_bases
GGTTCATGTTGACTCCCTCTGATCAAAAGGTTGATGTAGTTCATGATGTACGTCAACCAAAAATGAGAAAAATCACATCA
CCAATGAAAGGCCCATCCCT

Downstream 100 bases:

>100_bases
AAGCCCGGCGACATAGCGCTAGGATTTTTCCAGATCGCTCAGCACCTGTGCCCAGGCCTGCAGCATCACCGCAGCGGATT
CAGCGCCGGGATCAATATGC

Product: hypothetical protein

Products: NA

Alternate protein names: Fucose 1-epimerase; Type-2 mutarotase [H]

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MLIGIDPVLTPDLLRHLGAMGHGDQLVIADANFPAESCANRIERLAGASATEALRAILSVMPLDTYVDAPARSMQVVGDP
EAVPDIVAEFQRIIDEVADHPAQIQSVERHEFYREAKKTYCVVQTSENRFYGNIILSKGAIAPS

Sequences:

>Translated_144_residues
MLIGIDPVLTPDLLRHLGAMGHGDQLVIADANFPAESCANRIERLAGASATEALRAILSVMPLDTYVDAPARSMQVVGDP
EAVPDIVAEFQRIIDEVADHPAQIQSVERHEFYREAKKTYCVVQTSENRFYGNIILSKGAIAPS
>Mature_144_residues
MLIGIDPVLTPDLLRHLGAMGHGDQLVIADANFPAESCANRIERLAGASATEALRAILSVMPLDTYVDAPARSMQVVGDP
EAVPDIVAEFQRIIDEVADHPAQIQSVERHEFYREAKKTYCVVQTSENRFYGNIILSKGAIAPS

Specific function: Involved in the anomeric conversion of L-fucose [H]

COG id: COG4154

COG function: function code G; Fucose dissimilation pathway protein FucU

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbsD / fucU family. FucU mutarotase subfamily [H]

Homologues:

Organism=Homo sapiens, GI148596947, Length=147, Percent_Identity=41.4965986394558, Blast_Score=104, Evalue=2e-23,
Organism=Homo sapiens, GI148596951, Length=131, Percent_Identity=39.6946564885496, Blast_Score=85, Evalue=3e-17,
Organism=Escherichia coli, GI1789169, Length=139, Percent_Identity=35.2517985611511, Blast_Score=87, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007721 [H]

Pfam domain/function: PF05025 RbsD_FucU [H]

EC number: NA

Molecular weight: Translated: 15672; Mature: 15672

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIGIDPVLTPDLLRHLGAMGHGDQLVIADANFPAESCANRIERLAGASATEALRAILSV
CEECCCCCCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
MPLDTYVDAPARSMQVVGDPEAVPDIVAEFQRIIDEVADHPAQIQSVERHEFYREAKKTY
HCHHHHHCCCCHHEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEE
CVVQTSENRFYGNIILSKGAIAPS
EEEEECCCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MLIGIDPVLTPDLLRHLGAMGHGDQLVIADANFPAESCANRIERLAGASATEALRAILSV
CEECCCCCCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
MPLDTYVDAPARSMQVVGDPEAVPDIVAEFQRIIDEVADHPAQIQSVERHEFYREAKKTY
HCHHHHHCCCCHHEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEE
CVVQTSENRFYGNIILSKGAIAPS
EEEEECCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA