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The map label for this gene is 110681017

Identifier: 110681017

GI number: 110681017

Start: 3747583

End: 3748293

Strand: Direct

Name: 110681017

Synonym: RD1_3877

Alternate gene names: NA

Gene position: 3747583-3748293 (Clockwise)

Preceding gene: 110681016

Following gene: 110681027

Centisome position: 90.67

GC content: 60.06

Gene sequence:

>711_bases
ATGCCGTGCTGCGGTCTGCCGACAGCGGACGGTGGGAAGCGGCAAGCTGATCCGAGGCCTGAGCCGGCCCGCGCCTTTGA
GCCGATCGCGCGGGTCGACCGCGCACATCGGCGCGCTATCTTTTTCGAAAGGACGACTTCGAAAGGGGATGAAATGCGCG
GAATACGGGGATTGGCATGGGCGGCATTGCTTGCCGTGGGACTAAGCGCGACGGCCGCCGCAGATGACATGGTTCTCGAA
GACTTCGGCGACGGCGCGTCGAAACGCTGGCAGTATGCGGCGGATACGGTGATGGGCGGTGTCTCTGACGGTGGTGCCGT
CGTGGCCATGATCGATGGCCAGCCCGGCATCCGGTTGACCGGCACTGTCAGCACGGTGTTCAACGGTGGCTTTATTCAAG
TACGCCGTCTGCTGCGCGATGGCCTGCCCGCGGCAACCACCGGGATCGAGATGGATGTGCGCGGAAACGATCAGCGCTAC
TATTTGTTTATCAGAACGTCCGAGATGAGCAGGCCATGGTACTATTACGGCGAAAGTTTCGAAGCTTGCACCTCATGGCA
AAAGGTGCAGTTGTCGCTGGACAGTTTTGAGCGATCTCACGCACATCTGAGCGAGAGCATTGACCCCGAAGAAATCATCA
GCATCGCCATTGTCGCCTTTGGCCGCGATCATGAGGCGGATATTTCGGTGCGGCGCATCGCGCTCTTTTGA

Upstream 100 bases:

>100_bases
GAAAGCTTCACGCATCAGGCGGCGGATTTCATCATGGGTCTTGACGGAATGCCCGCCGCGCCAACCTTTGCCGACGCGCT
GAAGACCGACAGGGTCACGG

Downstream 100 bases:

>100_bases
GGCACGCCTGAGCGTCGATGCTCAGGCCGCGCGCCATGCGGCCATCGCGGCCTCGGTCTGCGCGCGATCAATGATCCCGG
CGTCAGACCCAAGACCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: CIA30 Family NADH Ubiquinone Oxidoreductase Subunit

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MPCCGLPTADGGKRQADPRPEPARAFEPIARVDRAHRRAIFFERTTSKGDEMRGIRGLAWAALLAVGLSATAAADDMVLE
DFGDGASKRWQYAADTVMGGVSDGGAVVAMIDGQPGIRLTGTVSTVFNGGFIQVRRLLRDGLPAATTGIEMDVRGNDQRY
YLFIRTSEMSRPWYYYGESFEACTSWQKVQLSLDSFERSHAHLSESIDPEEIISIAIVAFGRDHEADISVRRIALF

Sequences:

>Translated_236_residues
MPCCGLPTADGGKRQADPRPEPARAFEPIARVDRAHRRAIFFERTTSKGDEMRGIRGLAWAALLAVGLSATAAADDMVLE
DFGDGASKRWQYAADTVMGGVSDGGAVVAMIDGQPGIRLTGTVSTVFNGGFIQVRRLLRDGLPAATTGIEMDVRGNDQRY
YLFIRTSEMSRPWYYYGESFEACTSWQKVQLSLDSFERSHAHLSESIDPEEIISIAIVAFGRDHEADISVRRIALF
>Mature_235_residues
PCCGLPTADGGKRQADPRPEPARAFEPIARVDRAHRRAIFFERTTSKGDEMRGIRGLAWAALLAVGLSATAAADDMVLED
FGDGASKRWQYAADTVMGGVSDGGAVVAMIDGQPGIRLTGTVSTVFNGGFIQVRRLLRDGLPAATTGIEMDVRGNDQRYY
LFIRTSEMSRPWYYYGESFEACTSWQKVQLSLDSFERSHAHLSESIDPEEIISIAIVAFGRDHEADISVRRIALF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25910; Mature: 25778

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCCGLPTADGGKRQADPRPEPARAFEPIARVDRAHRRAIFFERTTSKGDEMRGIRGLAW
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHH
AALLAVGLSATAAADDMVLEDFGDGASKRWQYAADTVMGGVSDGGAVVAMIDGQPGIRLT
HHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEE
GTVSTVFNGGFIQVRRLLRDGLPAATTGIEMDVRGNDQRYYLFIRTSEMSRPWYYYGESF
EEHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCEEEECCCH
EACTSWQKVQLSLDSFERSHAHLSESIDPEEIISIAIVAFGRDHEADISVRRIALF
HHHCCHHHEEEEHHHHHHHHHHHHCCCCHHHHHEEEEEEECCCCCCCCEEEEEEEC
>Mature Secondary Structure 
PCCGLPTADGGKRQADPRPEPARAFEPIARVDRAHRRAIFFERTTSKGDEMRGIRGLAW
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHH
AALLAVGLSATAAADDMVLEDFGDGASKRWQYAADTVMGGVSDGGAVVAMIDGQPGIRLT
HHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEE
GTVSTVFNGGFIQVRRLLRDGLPAATTGIEMDVRGNDQRYYLFIRTSEMSRPWYYYGESF
EEHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCEEEECCCH
EACTSWQKVQLSLDSFERSHAHLSESIDPEEIISIAIVAFGRDHEADISVRRIALF
HHHCCHHHEEEEHHHHHHHHHHHHCCCCHHHHHEEEEEEECCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA