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The map label for this gene is comD [H]

Identifier: 110680955

GI number: 110680955

Start: 3684432

End: 3684938

Strand: Direct

Name: comD [H]

Synonym: RD1_3812

Alternate gene names: 110680955

Gene position: 3684432-3684938 (Clockwise)

Preceding gene: 110680954

Following gene: 110680956

Centisome position: 89.14

GC content: 55.03

Gene sequence:

>507_bases
GTGTCCATCAGCTCTAAAATTGTGGACGATTTCATCGCGGAAGGCGTTGAATTCATTACCACAGTGCCGTGCAAACAACT
TGCCGGCGTCATCGAGGAAGTCGAGGCAAGACCCGAAATCCATCATGTCCCCTCCAACAAGGAAGACGAAGGCATGGGCC
TGTGCGCGGGGGCTTTCATGGGGGGCAAGAAACCTGCCATCATCATGCAGAACACCGCGATTGGTGTGACAATCAACACG
CTGGCGACGCTGACGCAATACTACCGGATGCCGCTGCCCATGTTGATCTCCTACCGGGGCGAATTGCGCGAACCTGTGGC
CTGTCAGGTCGAGATGGCGGTGCATACCAAGGCGCTGTTGAACCAGATGCTGATCCCCACGTTCCACTTCCATAAGGAAT
CCGATGCAGCCGAACTGCCTGAGATTCTGAAATACACATTCATGTGCAACAAACCTGTGGCGATCCTGACGGATGCGTCC
TTCTGGGGAGGCTATGGCGACCAATGA

Upstream 100 bases:

>100_bases
AGCAGGCGCATTGTTCTGTCGTCGTGTTGCGCTAGGCAGGCTGGTACCGTTCCCGATCACATGATTTTCACTTCAATCTG
AACCCCAGGAGGCCACATTC

Downstream 100 bases:

>100_bases
TCCGTTCTGAAATCCTGCGCGAAATCGCGCCCATCCTTCGGGATCACCTCGTTATCTGCAACATCGGTCTGCCCAGCCAG
GAACTGCATATGATCGACGA

Product: decarboxylase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MSISSKIVDDFIAEGVEFITTVPCKQLAGVIEEVEARPEIHHVPSNKEDEGMGLCAGAFMGGKKPAIIMQNTAIGVTINT
LATLTQYYRMPLPMLISYRGELREPVACQVEMAVHTKALLNQMLIPTFHFHKESDAAELPEILKYTFMCNKPVAILTDAS
FWGGYGDQ

Sequences:

>Translated_168_residues
MSISSKIVDDFIAEGVEFITTVPCKQLAGVIEEVEARPEIHHVPSNKEDEGMGLCAGAFMGGKKPAIIMQNTAIGVTINT
LATLTQYYRMPLPMLISYRGELREPVACQVEMAVHTKALLNQMLIPTFHFHKESDAAELPEILKYTFMCNKPVAILTDAS
FWGGYGDQ
>Mature_167_residues
SISSKIVDDFIAEGVEFITTVPCKQLAGVIEEVEARPEIHHVPSNKEDEGMGLCAGAFMGGKKPAIIMQNTAIGVTINTL
ATLTQYYRMPLPMLISYRGELREPVACQVEMAVHTKALLNQMLIPTFHFHKESDAAELPEILKYTFMCNKPVAILTDASF
WGGYGDQ

Specific function: Catalyzes the decarboxylation of sulfopyruvic acid to sulfoacetaldehyde [H]

COG id: COG4032

COG function: function code R; Predicted thiamine-pyrophosphate-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022502
- InterPro:   IPR012001 [H]

Pfam domain/function: PF02776 TPP_enzyme_N [H]

EC number: =4.1.1.79 [H]

Molecular weight: Translated: 18535; Mature: 18404

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISSKIVDDFIAEGVEFITTVPCKQLAGVIEEVEARPEIHHVPSNKEDEGMGLCAGAFM
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEHHHHC
GGKKPAIIMQNTAIGVTINTLATLTQYYRMPLPMLISYRGELREPVACQVEMAVHTKALL
CCCCCEEEEECCEEEEEHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEHHHHHHHHHHH
NQMLIPTFHFHKESDAAELPEILKYTFMCNKPVAILTDASFWGGYGDQ
HHHHCCHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHCCCCCCC
>Mature Secondary Structure 
SISSKIVDDFIAEGVEFITTVPCKQLAGVIEEVEARPEIHHVPSNKEDEGMGLCAGAFM
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEHHHHC
GGKKPAIIMQNTAIGVTINTLATLTQYYRMPLPMLISYRGELREPVACQVEMAVHTKALL
CCCCCEEEEECCEEEEEHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEHHHHHHHHHHH
NQMLIPTFHFHKESDAAELPEILKYTFMCNKPVAILTDASFWGGYGDQ
HHHHCCHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 10940029 [H]