| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is uspG [C]
Identifier: 110680954
GI number: 110680954
Start: 3683962
End: 3684366
Strand: Direct
Name: uspG [C]
Synonym: RD1_3811
Alternate gene names: 110680954
Gene position: 3683962-3684366 (Clockwise)
Preceding gene: 110680953
Following gene: 110680955
Centisome position: 89.13
GC content: 56.3
Gene sequence:
>405_bases ATGTACAAGAAGATCATCGTCTGCCTCGCTCTTGATCACGGCATAAGTGAAACCGCGCTGGCCAAGGCGAAACTGTTGCT GGATGACGGCGGCGAAATCATTGCACTGCATGTCCATGAACTGCCGTCGGGCACCACGAATGCCTATGTCACCGACGATA TCGTGGAGCGTGAACGGGCGAATGCCGAAAAACGGCTGTTGGAACGCGTGCAGGGTATCCCCAACGCCAGGGCTGTCCTG ATCAACGGCCACACGGGACGCTCAATTGCGCAATATGCAAAGGAACAAAACGCCGATTGCATCATCCTCGGGTCTCACAA ACCCGGTCTGAGCGATTTCTTTCTCGGCTCTACGGCTGCGCGGATCGTGCAGCAGGCGCATTGTTCTGTCGTCGTGTTGC GCTAG
Upstream 100 bases:
>100_bases TTTCACGACATTCGCAACGGTCAGGTCGCATCGCCCAAGATCGTCCTGATCCCCGAACACGCCGATTAATCCGCAGCCCG CAACCGAAAAAGGACATAGC
Downstream 100 bases:
>100_bases GCAGGCTGGTACCGTTCCCGATCACATGATTTTCACTTCAATCTGAACCCCAGGAGGCCACATTCGTGTCCATCAGCTCT AAAATTGTGGACGATTTCAT
Product: universal stress family protein, putative
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein F; Universal Stress Protein Family; UspA Domain-Containing Protein; Universal Stress Protein
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MYKKIIVCLALDHGISETALAKAKLLLDDGGEIIALHVHELPSGTTNAYVTDDIVERERANAEKRLLERVQGIPNARAVL INGHTGRSIAQYAKEQNADCIILGSHKPGLSDFFLGSTAARIVQQAHCSVVVLR
Sequences:
>Translated_134_residues MYKKIIVCLALDHGISETALAKAKLLLDDGGEIIALHVHELPSGTTNAYVTDDIVERERANAEKRLLERVQGIPNARAVL INGHTGRSIAQYAKEQNADCIILGSHKPGLSDFFLGSTAARIVQQAHCSVVVLR >Mature_134_residues MYKKIIVCLALDHGISETALAKAKLLLDDGGEIIALHVHELPSGTTNAYVTDDIVERERANAEKRLLERVQGIPNARAVL INGHTGRSIAQYAKEQNADCIILGSHKPGLSDFFLGSTAARIVQQAHCSVVVLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 120 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14524; Mature: 14524
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKKIIVCLALDHGISETALAKAKLLLDDGGEIIALHVHELPSGTTNAYVTDDIVERERA CCCCEEEEEEECCCCCHHHHHHEEEEEECCCCEEEEEEEECCCCCCCCEECHHHHHHHHC NAEKRLLERVQGIPNARAVLINGHTGRSIAQYAKEQNADCIILGSHKPGLSDFFLGSTAA CHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHH RIVQQAHCSVVVLR HHHHHCCCCEEEEC >Mature Secondary Structure MYKKIIVCLALDHGISETALAKAKLLLDDGGEIIALHVHELPSGTTNAYVTDDIVERERA CCCCEEEEEEECCCCCHHHHHHEEEEEECCCCEEEEEEEECCCCCCCCEECHHHHHHHHC NAEKRLLERVQGIPNARAVLINGHTGRSIAQYAKEQNADCIILGSHKPGLSDFFLGSTAA CHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHH RIVQQAHCSVVVLR HHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA