Click here to switch to the map view.

The map label for this gene is 110680942

Identifier: 110680942

GI number: 110680942

Start: 3672643

End: 3673464

Strand: Direct

Name: 110680942

Synonym: RD1_3797

Alternate gene names: NA

Gene position: 3672643-3673464 (Clockwise)

Preceding gene: 110680941

Following gene: 110680943

Centisome position: 88.86

GC content: 61.56

Gene sequence:

>822_bases
ATGTGTGATGCTTGCGTGATAAATGCCGTAAAGGACCGGATGCTGTCGCGGCGGAATTTTTTCAAAGCCAGCGCCATGAC
AGGTGCAGCGGCGGCCCTTGGCGGCGTCGTGGCCACCCCGCAGGCGATGGCGGCGGGACACGGTGGTGTGGTTGACATGA
CCCACAAGCTGAGCCCCGATTTCCCGACGTTCTTTGGCGTGCCCGGTATTTCCATGGAACAGCCGTTCAACTTTGCCGAA
CATGGGTTCAACCTGATGAACCTCAGCATCAATGAGCACACGGCCACCCATATCGACGCGCCGCTGCATTTTTCCGCCGA
TGGAGCCAGCGTCGATGAGATCCCGGTGACCGATCTTGTGATCCCGCTCTGTGTGATCGACATCGCGGCCAAAGCGGCAG
AGGATGCAGACGCGCAAGTCACCCCGGATGATCTGAAAGCATGGATCGCAGCGAACGGCGATATTCCGGAGCGCGCCTGC
ATTGCGATGCATTCCGGTTGGGCAGGCAAGACCGCGACCGACGCCTATGTGGGCAATGACGCGGATGGCGTGAAACACTT
CCCCGGTTTCCATGTGGAGGCCGCACAGATGCTGGTCGAAGAAACCACTGCCGTCTGCATGGCCGTGGATACGCTCTCGC
TGGATCACGGACCCTCGGCGGATTTCGCGACCCATTACGCGTGGCTGCCCGAAGGCCGCTATGGCATCGAAAACCTCGCA
GGGCTGGGCAATGTGCCCGCTGCCGGGGCGACCTTGGTCGTGGGCGCACCCAACCATGTGGGCGGCACCGGTGGCCCTGC
GCGCATCTTTGCGATGGTCTGA

Upstream 100 bases:

>100_bases
AGCTGATCCCTATCTCGGGTGCACGGCGTATTTTCGGGTTCAATCAGCAGGTCATGGGTGATCTCTAGCGCCCCCTGCGC
AACAGTGAGGAGACAAAGAT

Downstream 100 bases:

>100_bases
TGGCGACGGTTTCGCTCATCTCTGACGAAGCGGCCAGCCCTGAGGTGCTGGCCGTGTTCGACGACATCCGCGCAGTGCGC
GGGACGGATTTCATCAACAA

Product: cyclase, putative

Products: NA

Alternate protein names: Cyclase; Metal-Dependent Hydrolase; Cyclase Family; Kynurenine Formamidase; Metal-Dependent Hydrolase/Cyclase; Twin-Arginine Translocation Pathway Signal; Cyclase Superfamily; Cyclase Superfamily Protein; Secreted Protein

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MCDACVINAVKDRMLSRRNFFKASAMTGAAAALGGVVATPQAMAAGHGGVVDMTHKLSPDFPTFFGVPGISMEQPFNFAE
HGFNLMNLSINEHTATHIDAPLHFSADGASVDEIPVTDLVIPLCVIDIAAKAAEDADAQVTPDDLKAWIAANGDIPERAC
IAMHSGWAGKTATDAYVGNDADGVKHFPGFHVEAAQMLVEETTAVCMAVDTLSLDHGPSADFATHYAWLPEGRYGIENLA
GLGNVPAAGATLVVGAPNHVGGTGGPARIFAMV

Sequences:

>Translated_273_residues
MCDACVINAVKDRMLSRRNFFKASAMTGAAAALGGVVATPQAMAAGHGGVVDMTHKLSPDFPTFFGVPGISMEQPFNFAE
HGFNLMNLSINEHTATHIDAPLHFSADGASVDEIPVTDLVIPLCVIDIAAKAAEDADAQVTPDDLKAWIAANGDIPERAC
IAMHSGWAGKTATDAYVGNDADGVKHFPGFHVEAAQMLVEETTAVCMAVDTLSLDHGPSADFATHYAWLPEGRYGIENLA
GLGNVPAAGATLVVGAPNHVGGTGGPARIFAMV
>Mature_273_residues
MCDACVINAVKDRMLSRRNFFKASAMTGAAAALGGVVATPQAMAAGHGGVVDMTHKLSPDFPTFFGVPGISMEQPFNFAE
HGFNLMNLSINEHTATHIDAPLHFSADGASVDEIPVTDLVIPLCVIDIAAKAAEDADAQVTPDDLKAWIAANGDIPERAC
IAMHSGWAGKTATDAYVGNDADGVKHFPGFHVEAAQMLVEETTAVCMAVDTLSLDHGPSADFATHYAWLPEGRYGIENLA
GLGNVPAAGATLVVGAPNHVGGTGGPARIFAMV

Specific function: Unknown

COG id: COG1878

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28322; Mature: 28322

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCDACVINAVKDRMLSRRNFFKASAMTGAAAALGGVVATPQAMAAGHGGVVDMTHKLSPD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHCCCCCEEEEHHCCCCC
FPTFFGVPGISMEQPFNFAEHGFNLMNLSINEHTATHIDAPLHFSADGASVDEIPVTDLV
CCHHHCCCCCCCCCCCCHHHCCCEEEEEEECCCCCEEECCCEEECCCCCCCCCCCHHHHH
IPLCVIDIAAKAAEDADAQVTPDDLKAWIAANGDIPERACIAMHSGWAGKTATDAYVGND
HHHHHHHHHHHHCCCCCCCCCHHHHHEEEECCCCCCCHHEEEEECCCCCCCCCCCCCCCC
ADGVKHFPGFHVEAAQMLVEETTAVCMAVDTLSLDHGPSADFATHYAWLPEGRYGIENLA
CCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHEEEECCCCCCCHHHHH
GLGNVPAAGATLVVGAPNHVGGTGGPARIFAMV
CCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MCDACVINAVKDRMLSRRNFFKASAMTGAAAALGGVVATPQAMAAGHGGVVDMTHKLSPD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHCCCCCEEEEHHCCCCC
FPTFFGVPGISMEQPFNFAEHGFNLMNLSINEHTATHIDAPLHFSADGASVDEIPVTDLV
CCHHHCCCCCCCCCCCCHHHCCCEEEEEEECCCCCEEECCCEEECCCCCCCCCCCHHHHH
IPLCVIDIAAKAAEDADAQVTPDDLKAWIAANGDIPERACIAMHSGWAGKTATDAYVGND
HHHHHHHHHHHHCCCCCCCCCHHHHHEEEECCCCCCCHHEEEEECCCCCCCCCCCCCCCC
ADGVKHFPGFHVEAAQMLVEETTAVCMAVDTLSLDHGPSADFATHYAWLPEGRYGIENLA
CCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHEEEECCCCCCCHHHHH
GLGNVPAAGATLVVGAPNHVGGTGGPARIFAMV
CCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA