Click here to switch to the map view.

The map label for this gene is 110680943

Identifier: 110680943

GI number: 110680943

Start: 3673464

End: 3673859

Strand: Direct

Name: 110680943

Synonym: RD1_3798

Alternate gene names: NA

Gene position: 3673464-3673859 (Clockwise)

Preceding gene: 110680942

Following gene: 110680944

Centisome position: 88.88

GC content: 61.62

Gene sequence:

>396_bases
ATGGCGACGGTTTCGCTCATCTCTGACGAAGCGGCCAGCCCTGAGGTGCTGGCCGTGTTCGACGACATCCGCGCAGTGCG
CGGGACGGATTTCATCAACAACTTCTGGCGCGCTCTGGCGCATGACCCGGCATTGCTCAAAGCCACTTGGGAGCGGCTGA
AGGTCGTGATGGGCCCCGGTGATCTCGACCCGTTGGTCAAGGAGATGATCTATATCGCCGTTTCAACCGCCAACGGCTGT
TCCTACTGCGTGCACTCCCACACCGCCGCCGCCAAGGCCAAAGGCATGAGCGACGCACAACACGGAGAACTGGCCGCCGT
CATCGGCATGGCGATGCAAACCAATGGGCTGGTCACGGCGCTGCAGGTGGAGGTCGACAAGGTGTTCAAGGCATGA

Upstream 100 bases:

>100_bases
GGCTGGGCAATGTGCCCGCTGCCGGGGCGACCTTGGTCGTGGGCGCACCCAACCATGTGGGCGGCACCGGTGGCCCTGCG
CGCATCTTTGCGATGGTCTG

Downstream 100 bases:

>100_bases
CTGCACTCTACCCAAACGCGCAACAGAGCCGGGCGGCGACCGGCCGCGGGCGTCGCGCTGAAAGCGCCCGCCCGGGGGGG
CGGTCGGGCGCTGCCCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Alkylhydroperoxidase Like Protein AhpD Family; Alkylhydroperoxidase AhpD Core; Alkylhydroperoxidase AhpD Family Core Domain-Containing; Carboxymuconolactone Decarboxylase Protein; Alkylhydroperoxidase-Like Protein; Alcohol Dehydrogenase; Peroxidase-Related

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MATVSLISDEAASPEVLAVFDDIRAVRGTDFINNFWRALAHDPALLKATWERLKVVMGPGDLDPLVKEMIYIAVSTANGC
SYCVHSHTAAAKAKGMSDAQHGELAAVIGMAMQTNGLVTALQVEVDKVFKA

Sequences:

>Translated_131_residues
MATVSLISDEAASPEVLAVFDDIRAVRGTDFINNFWRALAHDPALLKATWERLKVVMGPGDLDPLVKEMIYIAVSTANGC
SYCVHSHTAAAKAKGMSDAQHGELAAVIGMAMQTNGLVTALQVEVDKVFKA
>Mature_130_residues
ATVSLISDEAASPEVLAVFDDIRAVRGTDFINNFWRALAHDPALLKATWERLKVVMGPGDLDPLVKEMIYIAVSTANGCS
YCVHSHTAAAKAKGMSDAQHGELAAVIGMAMQTNGLVTALQVEVDKVFKA

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13987; Mature: 13856

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATVSLISDEAASPEVLAVFDDIRAVRGTDFINNFWRALAHDPALLKATWERLKVVMGPG
CCEEECCCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHEEEECCC
DLDPLVKEMIYIAVSTANGCSYCVHSHTAAAKAKGMSDAQHGELAAVIGMAMQTNGLVTA
CCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEE
LQVEVDKVFKA
EEEEHHHHHCC
>Mature Secondary Structure 
ATVSLISDEAASPEVLAVFDDIRAVRGTDFINNFWRALAHDPALLKATWERLKVVMGPG
CEEECCCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHEEEECCC
DLDPLVKEMIYIAVSTANGCSYCVHSHTAAAKAKGMSDAQHGELAAVIGMAMQTNGLVTA
CCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEE
LQVEVDKVFKA
EEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA