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The map label for this gene is 110680846

Identifier: 110680846

GI number: 110680846

Start: 3558723

End: 3560123

Strand: Direct

Name: 110680846

Synonym: RD1_3695

Alternate gene names: NA

Gene position: 3558723-3560123 (Clockwise)

Preceding gene: 110680845

Following gene: 110680847

Centisome position: 86.1

GC content: 62.24

Gene sequence:

>1401_bases
ATGACCCGCACCGCCGCACTGAAGCGCGCGCGCGCATATTTCGATCAGGGGCAGTTTCAGTCTGACCTGGCGGACCTCGT
GGCCTATCGCACCGAAAGCCAGAGCCGCAGCGAAATGGCGCGAAAGGAAAGCGCGCGGTATCTGAACGTCGCCATCGGGC
CGCGCCTTGCCGCGATGGGGTTCAGCTTTGAAATCATTGAAAACCCTGACGCAAATGGCGGCCCGCTATTGATCGGTGAG
CGGCGCGAAAGCGACGACCAGATCACCGTTCTGACCTATGGGCACGGGGATACCGTGCTTGCTCAGGAGGTTATGTGGCG
CGAGGGCCTTGCGCCATGGACGCTGGTTGACGAAGGCGACCGCCTTTATGGACGCGGCACGGCGGACAACAAGAGCCAGC
ATCTGATCAATATCGCCGCCGTCGAGGCCGTGCTGGCCACGCGCGGGCGTCTTGGGTTCAACCTGCGCATCGTGATCGAA
ATGAGCGAAGAGGTTGGCTCAATCGGTCTGGCGCAGGTCTTTGCACGCTACAAGGAGCGTCTTGCGGCGGATGTCCTGAT
CGCATCGGATGGCCCGCGCCTGCAACCCGGCGTGCCGACCATGTTCATGGGCTCACGCGGGGCGACGACCTTTGATTTGC
TGGTGCAAACACATGATGGCGCGCATCATTCCGGCAACTGGGGCGGGCTTTTGGCGGACCCTGCGATGATCCTTGCGCAT
GCGCTGGCGTCGATCACCGACCGGCGGGGCCAGATCAAGGTGCCCGAATGGCGCCCCGACAGCCTGACCGTTGGGGTGCG
CGCTGCCCTGAGGGATTTGCCGGTCACAGATAGGGATGGGCCAGCAGTCAAGCCCGATTGGGGCGAAGAAGGTCTCACCC
CCGCCGAGCGGGTTTTCGGGTGGAACAGTTTCGCGGTTCTCGCTCAGGTTTGCGGCACACCTGAGGCCCCGGTCAACGCG
ATTTCGGGATGGGCGCGCGCCACATGCCAATTGCGCTATGTGGTGGGCACTGACCCGGCGGATATAGTGCCCGCCTTGCG
CCGCCATCTGGATGCGCATGGGTTTGAAGACGTCCAGATCTTAGAGCATGCGCGCGGCTTCTTTTCGGCCACGCGTCTTG
ACCCCGATCACCCTTGGGCGGCATTCGTCGCAAACTCGATCCGCGAAACCAGTGGCGGGGCGCTGCATATCCTGCCCAAC
CTTGCCGGGTCGCTCCCGAATGACAGCTTTACCGATATTCTTGAGGTTCCCACGATCTGGGTGCCGCACTCCTATCGGGG
CTGCGCGCAACATGCGCCCGATGAACATGTACTGAAATCCGTCTGTTGCGACGCATTGCAGGTCATGGCGGGTGTCTTTT
GGGATCTCGGCGCGGATGGCGCAGACCTGCCGAAAAAATAA

Upstream 100 bases:

>100_bases
AACCCTGGCCGTGGAGCGATCTCGATTAAGGGTTTACACCCAACAGGGGCACTTCGGTTTCAGGACGAAAAAGCGTACAC
AACAGACAACAGGGAATACG

Downstream 100 bases:

>100_bases
TACGTCCCCGCGTCGCGGCTATCTTCTTGAGGAAACCTGCCGCGGCCCTTAAAACAGCAATCTGATTTGCACCGAGGCCC
GAAAACGAATGCGTTTGACG

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase; M20/M25/M40 Family Peptidase; Peptidase Family; ArgE/DapE/Acy1 Family Protein; Succinyl-Diaminopimelate Desuccinylase; Deacylase; Beta-Ala-His Dipeptidase; Peptidase Dimerization Domain Protein; Peptidase Dimerisation Domain Protein; Peptidase Dimerisation Domain-Containing Protein; N-Acyl-L-Amino Acid Amidohydrolase; Peptidase Or Deacetlylase Family Protein; Desuccinylase Deacetylase Or Peptidase; Zinc Metallopeptidase; M20 Family Peptidase; ArgE/DapE/Acy1 Family Peptidase; Acetylornithine Deacetylase

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MTRTAALKRARAYFDQGQFQSDLADLVAYRTESQSRSEMARKESARYLNVAIGPRLAAMGFSFEIIENPDANGGPLLIGE
RRESDDQITVLTYGHGDTVLAQEVMWREGLAPWTLVDEGDRLYGRGTADNKSQHLINIAAVEAVLATRGRLGFNLRIVIE
MSEEVGSIGLAQVFARYKERLAADVLIASDGPRLQPGVPTMFMGSRGATTFDLLVQTHDGAHHSGNWGGLLADPAMILAH
ALASITDRRGQIKVPEWRPDSLTVGVRAALRDLPVTDRDGPAVKPDWGEEGLTPAERVFGWNSFAVLAQVCGTPEAPVNA
ISGWARATCQLRYVVGTDPADIVPALRRHLDAHGFEDVQILEHARGFFSATRLDPDHPWAAFVANSIRETSGGALHILPN
LAGSLPNDSFTDILEVPTIWVPHSYRGCAQHAPDEHVLKSVCCDALQVMAGVFWDLGADGADLPKK

Sequences:

>Translated_466_residues
MTRTAALKRARAYFDQGQFQSDLADLVAYRTESQSRSEMARKESARYLNVAIGPRLAAMGFSFEIIENPDANGGPLLIGE
RRESDDQITVLTYGHGDTVLAQEVMWREGLAPWTLVDEGDRLYGRGTADNKSQHLINIAAVEAVLATRGRLGFNLRIVIE
MSEEVGSIGLAQVFARYKERLAADVLIASDGPRLQPGVPTMFMGSRGATTFDLLVQTHDGAHHSGNWGGLLADPAMILAH
ALASITDRRGQIKVPEWRPDSLTVGVRAALRDLPVTDRDGPAVKPDWGEEGLTPAERVFGWNSFAVLAQVCGTPEAPVNA
ISGWARATCQLRYVVGTDPADIVPALRRHLDAHGFEDVQILEHARGFFSATRLDPDHPWAAFVANSIRETSGGALHILPN
LAGSLPNDSFTDILEVPTIWVPHSYRGCAQHAPDEHVLKSVCCDALQVMAGVFWDLGADGADLPKK
>Mature_465_residues
TRTAALKRARAYFDQGQFQSDLADLVAYRTESQSRSEMARKESARYLNVAIGPRLAAMGFSFEIIENPDANGGPLLIGER
RESDDQITVLTYGHGDTVLAQEVMWREGLAPWTLVDEGDRLYGRGTADNKSQHLINIAAVEAVLATRGRLGFNLRIVIEM
SEEVGSIGLAQVFARYKERLAADVLIASDGPRLQPGVPTMFMGSRGATTFDLLVQTHDGAHHSGNWGGLLADPAMILAHA
LASITDRRGQIKVPEWRPDSLTVGVRAALRDLPVTDRDGPAVKPDWGEEGLTPAERVFGWNSFAVLAQVCGTPEAPVNAI
SGWARATCQLRYVVGTDPADIVPALRRHLDAHGFEDVQILEHARGFFSATRLDPDHPWAAFVANSIRETSGGALHILPNL
AGSLPNDSFTDILEVPTIWVPHSYRGCAQHAPDEHVLKSVCCDALQVMAGVFWDLGADGADLPKK

Specific function: Unknown

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21071039, Length=265, Percent_Identity=30.9433962264151, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI271398239, Length=264, Percent_Identity=31.8181818181818, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17563146, Length=184, Percent_Identity=30.9782608695652, Blast_Score=84, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6319758, Length=259, Percent_Identity=25.0965250965251, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6321159, Length=205, Percent_Identity=28.2926829268293, Blast_Score=71, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24585880, Length=183, Percent_Identity=32.7868852459016, Blast_Score=79, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50666; Mature: 50535

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTAALKRARAYFDQGQFQSDLADLVAYRTESQSRSEMARKESARYLNVAIGPRLAAMG
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCEEHHCC
FSFEIIENPDANGGPLLIGERRESDDQITVLTYGHGDTVLAQEVMWREGLAPWTLVDEGD
CEEEEEECCCCCCCCEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCC
RLYGRGTADNKSQHLINIAAVEAVLATRGRLGFNLRIVIEMSEEVGSIGLAQVFARYKER
EEEECCCCCCCCHHEEHHHHHHHHHHHCCCCCCEEEEEEEECHHHCCCHHHHHHHHHHHH
LAADVLIASDGPRLQPGVPTMFMGSRGATTFDLLVQTHDGAHHSGNWGGLLADPAMILAH
HHHEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHH
ALASITDRRGQIKVPEWRPDSLTVGVRAALRDLPVTDRDGPAVKPDWGEEGLTPAERVFG
HHHHHHCCCCCEECCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCC
WNSFAVLAQVCGTPEAPVNAISGWARATCQLRYVVGTDPADIVPALRRHLDAHGFEDVQI
CCHHHHHHHHHCCCCCCHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHH
LEHARGFFSATRLDPDHPWAAFVANSIRETSGGALHILPNLAGSLPNDSFTDILEVPTIW
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEECCHHCCCCCCCCHHHHHHCCEEE
VPHSYRGCAQHAPDEHVLKSVCCDALQVMAGVFWDLGADGADLPKK
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TRTAALKRARAYFDQGQFQSDLADLVAYRTESQSRSEMARKESARYLNVAIGPRLAAMG
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCEEHHCC
FSFEIIENPDANGGPLLIGERRESDDQITVLTYGHGDTVLAQEVMWREGLAPWTLVDEGD
CEEEEEECCCCCCCCEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCC
RLYGRGTADNKSQHLINIAAVEAVLATRGRLGFNLRIVIEMSEEVGSIGLAQVFARYKER
EEEECCCCCCCCHHEEHHHHHHHHHHHCCCCCCEEEEEEEECHHHCCCHHHHHHHHHHHH
LAADVLIASDGPRLQPGVPTMFMGSRGATTFDLLVQTHDGAHHSGNWGGLLADPAMILAH
HHHEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHH
ALASITDRRGQIKVPEWRPDSLTVGVRAALRDLPVTDRDGPAVKPDWGEEGLTPAERVFG
HHHHHHCCCCCEECCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCC
WNSFAVLAQVCGTPEAPVNAISGWARATCQLRYVVGTDPADIVPALRRHLDAHGFEDVQI
CCHHHHHHHHHCCCCCCHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHH
LEHARGFFSATRLDPDHPWAAFVANSIRETSGGALHILPNLAGSLPNDSFTDILEVPTIW
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEECCHHCCCCCCCCHHHHHHCCEEE
VPHSYRGCAQHAPDEHVLKSVCCDALQVMAGVFWDLGADGADLPKK
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA