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The map label for this gene is amiC [H]

Identifier: 110680754

GI number: 110680754

Start: 3461997

End: 3463268

Strand: Direct

Name: amiC [H]

Synonym: RD1_3596

Alternate gene names: 110680754

Gene position: 3461997-3463268 (Clockwise)

Preceding gene: 110680749

Following gene: 110680755

Centisome position: 83.76

GC content: 57.31

Gene sequence:

>1272_bases
ATGACTGACAAGAAGATACCCGCGAAACTAGCAGGGCCAAGCCGACGCGCATTCATGGCGGGAACAGCCGCACTGACCGC
ATCGCTTTTCGCCCCGAAGCACCTGCGCGCTGCTGATTTCCCGACCGCTGACGTGAATACAACAGGGCTCGCAGTAACCG
ACGACACCGTCACCATCGGCATCCTGCACTCAGTGACGGGCACGATGGCGATATCCGAAACAGGTTCGGTTCAGGCCGAG
AAACTGGCGATCGAGCAGATCAACGCACAAGGCGGCATCCTTGGTCGCAAGATCGAATACATTCAGGAAGACGGCGCTTC
TGACTGGCCGACGTTCGCGGAAAAGGCGCGCAAACTGTTGGTGAACGACAAGGTCGCATCCGTCATGGGCTGCTGGACCT
CCGCTTCGCGCAAAGCCGTTCTGCCCGTCTTTGAGCAGCACAACGGGTTCCTCTATTACCCCACTTTCTACGAAGGTTTG
GAACAATCGCCCAACGTGATCTACACCGGACAGGAAGCCACGCAGCAGATCATCGCAGGCCTTGATTGGGTGACACAGAC
CAAGGGCGCGAAATCCTTTTACCTGCTGGGGTCTGACTACATCTGGCCACGCACTTCGAACAAGATTGCCCGCGCGCACA
TCGAAAAGTTCATGGAAGGCACCAAGGTCGTTGGCGAGGATTACTACCCGCTTGGCCACACGCAGTTCAATTCGGTCATC
AACAAGATCCGTCTGCGCAAGCCCGATGTGATCTATGCGATTGTTGTCGGTGGCTCGAACGTTGCGTTCTACAAACAGCT
CAAAGCCGCGGGCATTGATCCGGCTGAGGAAAGCCCGATCGTTCTGACCATCTCGGTGACGGAGGACGAGATCCGCGGCA
TCGGTGGCGAGAACGTCGAGGGTGCCTACGCCTGCATGAAGTATTTCCAAAGCCTTGAGAATGAGAACAACATCGCATTC
GTCAAAGCCTTCAAAGAGATGTGGGGCGACGACATGGTGATCGGTGACGTGACACAAGCGGCCTATCTTGGACCGTGGCT
GTGGAAAGCAGCAGTCGAAAAGGCCGGATCGTTCGATGTGGACAAAGTCCGCGCGGCAAGCCCCGGCATTGAGATGACGA
CAGCGCCAGAAGGCTACGTCAAGATCCACGAAAACCACCACCTGTGGTCCAAGACCCGCGTGGGCCGCGCGCAGGCGGAT
GGGCAGTACGAAGTGGTGTTTGAAACCGCCGAACTGGTGGAGCCTGATCCCTTCCCCGAAGGCTACCAGTAA

Upstream 100 bases:

>100_bases
CGTCAATCGACGTATACGCCGCCGCCTCTGGTTAACAGAAGATGAAATTAATCTGCACGGATTCTGCACATCTACCGATT
TTAACCCGAGAGGATTGTCC

Downstream 100 bases:

>100_bases
AAAGCGGCATCGGGGGGCGCGCTTCGTAGGCCGCGCCTCCCTTTTTCCCAGACAAGCGACGGAGACAGGACATGTTTGCA
GATTATTCGATGAGCGAACT

Product: ABC transporter, substrate-binding protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MTDKKIPAKLAGPSRRAFMAGTAALTASLFAPKHLRAADFPTADVNTTGLAVTDDTVTIGILHSVTGTMAISETGSVQAE
KLAIEQINAQGGILGRKIEYIQEDGASDWPTFAEKARKLLVNDKVASVMGCWTSASRKAVLPVFEQHNGFLYYPTFYEGL
EQSPNVIYTGQEATQQIIAGLDWVTQTKGAKSFYLLGSDYIWPRTSNKIARAHIEKFMEGTKVVGEDYYPLGHTQFNSVI
NKIRLRKPDVIYAIVVGGSNVAFYKQLKAAGIDPAEESPIVLTISVTEDEIRGIGGENVEGAYACMKYFQSLENENNIAF
VKAFKEMWGDDMVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVRAASPGIEMTTAPEGYVKIHENHHLWSKTRVGRAQAD
GQYEVVFETAELVEPDPFPEGYQ

Sequences:

>Translated_423_residues
MTDKKIPAKLAGPSRRAFMAGTAALTASLFAPKHLRAADFPTADVNTTGLAVTDDTVTIGILHSVTGTMAISETGSVQAE
KLAIEQINAQGGILGRKIEYIQEDGASDWPTFAEKARKLLVNDKVASVMGCWTSASRKAVLPVFEQHNGFLYYPTFYEGL
EQSPNVIYTGQEATQQIIAGLDWVTQTKGAKSFYLLGSDYIWPRTSNKIARAHIEKFMEGTKVVGEDYYPLGHTQFNSVI
NKIRLRKPDVIYAIVVGGSNVAFYKQLKAAGIDPAEESPIVLTISVTEDEIRGIGGENVEGAYACMKYFQSLENENNIAF
VKAFKEMWGDDMVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVRAASPGIEMTTAPEGYVKIHENHHLWSKTRVGRAQAD
GQYEVVFETAELVEPDPFPEGYQ
>Mature_422_residues
TDKKIPAKLAGPSRRAFMAGTAALTASLFAPKHLRAADFPTADVNTTGLAVTDDTVTIGILHSVTGTMAISETGSVQAEK
LAIEQINAQGGILGRKIEYIQEDGASDWPTFAEKARKLLVNDKVASVMGCWTSASRKAVLPVFEQHNGFLYYPTFYEGLE
QSPNVIYTGQEATQQIIAGLDWVTQTKGAKSFYLLGSDYIWPRTSNKIARAHIEKFMEGTKVVGEDYYPLGHTQFNSVIN
KIRLRKPDVIYAIVVGGSNVAFYKQLKAAGIDPAEESPIVLTISVTEDEIRGIGGENVEGAYACMKYFQSLENENNIAFV
KAFKEMWGDDMVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVRAASPGIEMTTAPEGYVKIHENHHLWSKTRVGRAQADG
QYEVVFETAELVEPDPFPEGYQ

Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000709 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46380; Mature: 46249

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKKIPAKLAGPSRRAFMAGTAALTASLFAPKHLRAADFPTADVNTTGLAVTDDTVTIG
CCCCCCCHHHCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCEEEE
ILHSVTGTMAISETGSVQAEKLAIEQINAQGGILGRKIEYIQEDGASDWPTFAEKARKLL
EEHHCCCEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
VNDKVASVMGCWTSASRKAVLPVFEQHNGFLYYPTFYEGLEQSPNVIYTGQEATQQIIAG
HHHHHHHHHHHHCCCCCCEECCCEECCCCEEEECHHHHHHCCCCCEEEECHHHHHHHHHH
LDWVTQTKGAKSFYLLGSDYIWPRTSNKIARAHIEKFMEGTKVVGEDYYPLGHTQFNSVI
CHHHHHCCCCCEEEEECCCEECCCCCCHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHH
NKIRLRKPDVIYAIVVGGSNVAFYKQLKAAGIDPAEESPIVLTISVTEDEIRGIGGENVE
HHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHCCCCCCCC
GAYACMKYFQSLENENNIAFVKAFKEMWGDDMVIGDVTQAAYLGPWLWKAAVEKAGSFDV
HHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCH
DKVRAASPGIEMTTAPEGYVKIHENHHLWSKTRVGRAQADGQYEVVFETAELVEPDPFPE
HHHHCCCCCCEEEECCCCEEEECCCCCCHHHHCCCCCCCCCCEEEEEEEHHHCCCCCCCC
GYQ
CCC
>Mature Secondary Structure 
TDKKIPAKLAGPSRRAFMAGTAALTASLFAPKHLRAADFPTADVNTTGLAVTDDTVTIG
CCCCCCHHHCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCEEEE
ILHSVTGTMAISETGSVQAEKLAIEQINAQGGILGRKIEYIQEDGASDWPTFAEKARKLL
EEHHCCCEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
VNDKVASVMGCWTSASRKAVLPVFEQHNGFLYYPTFYEGLEQSPNVIYTGQEATQQIIAG
HHHHHHHHHHHHCCCCCCEECCCEECCCCEEEECHHHHHHCCCCCEEEECHHHHHHHHHH
LDWVTQTKGAKSFYLLGSDYIWPRTSNKIARAHIEKFMEGTKVVGEDYYPLGHTQFNSVI
CHHHHHCCCCCEEEEECCCEECCCCCCHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHH
NKIRLRKPDVIYAIVVGGSNVAFYKQLKAAGIDPAEESPIVLTISVTEDEIRGIGGENVE
HHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHCCCCCCCC
GAYACMKYFQSLENENNIAFVKAFKEMWGDDMVIGDVTQAAYLGPWLWKAAVEKAGSFDV
HHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCH
DKVRAASPGIEMTTAPEGYVKIHENHHLWSKTRVGRAQADGQYEVVFETAELVEPDPFPE
HHHHCCCCCCEEEECCCCEEEECCCCCCHHHHCCCCCCCCCCEEEEEEEHHHCCCCCCCC
GYQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]