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The map label for this gene is 110680739

Identifier: 110680739

GI number: 110680739

Start: 3440772

End: 3441335

Strand: Direct

Name: 110680739

Synonym: RD1_3580

Alternate gene names: NA

Gene position: 3440772-3441335 (Clockwise)

Preceding gene: 110680738

Following gene: 110680740

Centisome position: 83.25

GC content: 55.14

Gene sequence:

>564_bases
ATGATTACCCCCGAGCGCTCGAATAGCGGCAACCCCTGTTTGATCGTAAACTGCGCTTTGCTGCTTTGCACTTTAACCGT
TGCTTTCGCCACAAGCCTGTTCGTGATTTCGCAGGCTTCTGCAGTGACCCATGCGCAAACGCCGGTGCCGCCGCAGGTGC
AGCCAGATAACCAGATCACCCACCTGTTGCACGAGGCAAAGAATGAGCTGGACGAAAAAGACAGGGCCTTGGAAGCGCTG
CGCGACCAGCTCACCAACGGATATGTCGTGGCAAAGGACATCGACGTCACACAGAGCGACAAAGCCTATTGGCTGTCCGA
GCCCAAATTGATGCTGGGGGTCAGCCGTCTTTCCGGTGGCAGCCTGCTGATCAGCTTCGCGGATCAACAGGAGATCATCT
CCATCGGCGAACGTATCGACTTCAAGGTCGATGACTGCGACTGCTTCCTGCTCCTGAAATCAAGCACGTTTGGACATGCC
AGTTTTCGATACGCCTGCACACCCACGACGCAGGAACCAATCCGAAATGTGCAGGACAGATTCATCGACGCAAAGCTCAA
CTGA

Upstream 100 bases:

>100_bases
TTTTTGTGCGCGTCCCACCCCTTCGCATGCGGGCAGGACCGTGTCTGTGACGCTAGCTACCGGCTCAGTTGAACTTTAGT
CACCAGTCATGGAGTCCACG

Downstream 100 bases:

>100_bases
ACCTTGAATGCGCATTGCGGGCGCGCGCCGGCAGTGCCGCGCACATCTGGGCAATCGGGACGGACCAAGCGAATGGCACA
AAGCATGCCATATGCGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MITPERSNSGNPCLIVNCALLLCTLTVAFATSLFVISQASAVTHAQTPVPPQVQPDNQITHLLHEAKNELDEKDRALEAL
RDQLTNGYVVAKDIDVTQSDKAYWLSEPKLMLGVSRLSGGSLLISFADQQEIISIGERIDFKVDDCDCFLLLKSSTFGHA
SFRYACTPTTQEPIRNVQDRFIDAKLN

Sequences:

>Translated_187_residues
MITPERSNSGNPCLIVNCALLLCTLTVAFATSLFVISQASAVTHAQTPVPPQVQPDNQITHLLHEAKNELDEKDRALEAL
RDQLTNGYVVAKDIDVTQSDKAYWLSEPKLMLGVSRLSGGSLLISFADQQEIISIGERIDFKVDDCDCFLLLKSSTFGHA
SFRYACTPTTQEPIRNVQDRFIDAKLN
>Mature_187_residues
MITPERSNSGNPCLIVNCALLLCTLTVAFATSLFVISQASAVTHAQTPVPPQVQPDNQITHLLHEAKNELDEKDRALEAL
RDQLTNGYVVAKDIDVTQSDKAYWLSEPKLMLGVSRLSGGSLLISFADQQEIISIGERIDFKVDDCDCFLLLKSSTFGHA
SFRYACTPTTQEPIRNVQDRFIDAKLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20669; Mature: 20669

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITPERSNSGNPCLIVNCALLLCTLTVAFATSLFVISQASAVTHAQTPVPPQVQPDNQIT
CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
HLLHEAKNELDEKDRALEALRDQLTNGYVVAKDIDVTQSDKAYWLSEPKLMLGVSRLSGG
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCHHEEEEEECCCC
SLLISFADQQEIISIGERIDFKVDDCDCFLLLKSSTFGHASFRYACTPTTQEPIRNVQDR
EEEEEECCHHHHHHHHHHCCEEECCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHH
FIDAKLN
HHCCCCC
>Mature Secondary Structure
MITPERSNSGNPCLIVNCALLLCTLTVAFATSLFVISQASAVTHAQTPVPPQVQPDNQIT
CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
HLLHEAKNELDEKDRALEALRDQLTNGYVVAKDIDVTQSDKAYWLSEPKLMLGVSRLSGG
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCHHEEEEEECCCC
SLLISFADQQEIISIGERIDFKVDDCDCFLLLKSSTFGHASFRYACTPTTQEPIRNVQDR
EEEEEECCHHHHHHHHHHCCEEECCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHH
FIDAKLN
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA