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The map label for this gene is mcpA [H]

Identifier: 110680740

GI number: 110680740

Start: 3441840

End: 3444134

Strand: Direct

Name: mcpA [H]

Synonym: RD1_3582

Alternate gene names: 110680740

Gene position: 3441840-3444134 (Clockwise)

Preceding gene: 110680739

Following gene: 110680741

Centisome position: 83.28

GC content: 55.42

Gene sequence:

>2295_bases
ATGTCGGAAACCATCGCCGGCATGGGCGAAAGTGTTGCCGGTGGAATCGTGCTGGGCGCGGATGGTACGGTCTTGATCGA
AGAGATGCGGGATGGAAACTCGTCAGCGGCCTTGTTGGAAGCCGCGCGTCAGGCGCTCGCGGCGGGGGAGGTCACAACCA
ACCTCGAACGGCTGGTTGTGGCACGTCCCATTTTTATGGGCGAGGATCAGCAGTTGAAGGGCGTCGTTGCTTTGGACTGG
CAGTCCGAAATCCTCTATGCAGTTGTCGAGGAAAAGAACAGGCTCGCATTGATGATCGCCTTTTCGCTCACGATCGCAAT
GTTGGTAGTTTCCGCTTTTGTGATGCGGCGGGTCGTGGCGCAGCCAATGAAAGACATCGCATCATCTACGCAGAAAATCG
CCGATGGTGACTATGAAAGTGATGTCACGCAGTTCAAGGCTGGGAACGAGATTCAACCCGTGTCAGCAGCCCTGAGCGAG
TTCCGCAACACGCTTCAGGCATCAGAGAATAACCGCAAGGACGCCGCAATGAAAAGCACTGCGCTTGACGCAGGCTCCGC
GGCAATCATGATCGCGGACGCCGATTTCAAGGTGGTGTATGCGTCCCGCGCCGTGCTGGAACTGCTTAAGCTGCATCGGG
GCGTCATTGAATCCCGCATCTCCGGATTTGACCCGGACAATATCGTGGGCCAATCAATTGATATATTCCATAAAAAGCCG
GATATGCAGCGCAACATGCTGGGGGCATTGGGGCCCAATGGTCACGAAGCGAACTTGGAAATGGACGACATCACACTAGA
GTTGAAGATTTCCAGGATTGACTCGGAAGATGGCGAACGGATCGGTTACATCGTCGAATGGGCAGATGTGACGCAACAGC
ACCTGAATGCCGCCGTGCTTGACTCGCTGAATGAAAACCAGGCGCGCGCGGAATTCGACAAGGATGGCCGCCTCGTGGAT
GCAAACGAACAATTCCGCGACCTGCTCGGCGCTCAGTCATCAGCGTTGGATTGCAATTTCTCGCAAACCGTATTTGTCGA
AGAAAATCCAGCCGATCCCAGCAAAGCCATGTTCGGCGAGATCCGGATCGAGGGTCATGGAAAGGTCTCTCACCTTCTGG
GTGGGCTCAGCCCCGTGACCTACACGAACGGCGATCTCAAGCGCACCGTGCTGATTGCCGCTGATGTAACGAAGGAAAAG
AGTGAGAAAGAGGCAGCAGAAGCGGAACGTGAACGCCTGCAGCGCGATCAGGATGCAATGATTGCATCTCTGAGTGACGC
CCTTTCAGAGCTTGCCAACGGCGATTTGACAGTGCGGATCAAGGAAGCGTTTGCAGGGTCGAATGATCGCATTCGTCAGG
ACTTCAACACGGCAATCGAACGTCTTGATGAAGCGATTGACTCCGTTGTCGGCGGGGCGATTGAGATCAACACGGAAGTG
GCAAGTGTTGCAAGTGCCGCTACCGAACTGAGCAAACGCACGGAAAGCCAGGCAGCAACCCTTGAAGAAACGGCGGCAGC
CATTTCTGAAATCAACGCTTCTGTAAGCAGTTCTGCTCAGAATGCCAAAAGCGCAAATGAAGTTGTAGGTGGCGCACAAA
GCGAGGCGCAGGCCTCGGGAAAAATTGTCAACGAAGCGGTTGACGCGATGGGGCGAATTGAAAAGAGTTCGACGGAAATC
TCTTCGATCGTCAAGGTCATCGACGACATCGCCTTCCAGACAAACCTGCTGGCCCTCAACGCCGGTGTCGAGGCGGCTCG
AGCAGGTGACGCGGGGCGTGGTTTCGCTGTTGTGGCCTCTGAAGTCCGTACACTTGCGCAACGCTCGTCAGAAGCGGCCA
GCGAGATCGGTGCACTCATTGCGACATCAACCGAAAACGTGGAGGTCGGCGTCGATCTGGTCGGAAAAACGGGAAATGCG
CTGGAGCAGATCATCGCTTCCATTACACATATCTCGGAGTTCGTTTCGCAGATTTCAGCCGCCTCACAGGAGCAATCATC
CGGCATCGCAGAGATCGACACTGCCATGTCTCAACTCGACAAGGTCACACAAGAAAATGCCGCGATGTTCGAAGAAACCA
CAGCTGCATCTCAGAACCTATCGAGAGTTGCAACGGACTTGACAGGCCAGGTACAGCGCTTCTCCACGCAATCCCAGTCT
GGCAAGCAAAAGGAAAACATCGCGGAGTTTGTCCCGCGCGAGACACAAACACCGCCGCAGCCCCGAACCAACAAAGCCGT
GGCCGCGGGATCGGGTGGTGGTGCCGCACCTGTTACTGGCTGGGAGGAGTTTTAA

Upstream 100 bases:

>100_bases
AGACTCCATCATTAAATTCAGGGGCCAGACATTGGTTCAAATCGCCGACCGCCTCGCCCCGGCGATCCAATTTAATAACC
TGTTTGGTGTGGGCAATATC

Downstream 100 bases:

>100_bases
TGCGCGAAACGCTCACAGTTCAAGAGCAACCTACCCGCGCATCAGTGGAGTTCAAAAGCAGCGATTTTTCGATAACTCAG
GCACGATTGGCCTCCCACGG

Product: methyl-accepting chemotaxis protein McpA

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 764; Mature: 763

Protein sequence:

>764_residues
MSETIAGMGESVAGGIVLGADGTVLIEEMRDGNSSAALLEAARQALAAGEVTTNLERLVVARPIFMGEDQQLKGVVALDW
QSEILYAVVEEKNRLALMIAFSLTIAMLVVSAFVMRRVVAQPMKDIASSTQKIADGDYESDVTQFKAGNEIQPVSAALSE
FRNTLQASENNRKDAAMKSTALDAGSAAIMIADADFKVVYASRAVLELLKLHRGVIESRISGFDPDNIVGQSIDIFHKKP
DMQRNMLGALGPNGHEANLEMDDITLELKISRIDSEDGERIGYIVEWADVTQQHLNAAVLDSLNENQARAEFDKDGRLVD
ANEQFRDLLGAQSSALDCNFSQTVFVEENPADPSKAMFGEIRIEGHGKVSHLLGGLSPVTYTNGDLKRTVLIAADVTKEK
SEKEAAEAERERLQRDQDAMIASLSDALSELANGDLTVRIKEAFAGSNDRIRQDFNTAIERLDEAIDSVVGGAIEINTEV
ASVASAATELSKRTESQAATLEETAAAISEINASVSSSAQNAKSANEVVGGAQSEAQASGKIVNEAVDAMGRIEKSSTEI
SSIVKVIDDIAFQTNLLALNAGVEAARAGDAGRGFAVVASEVRTLAQRSSEAASEIGALIATSTENVEVGVDLVGKTGNA
LEQIIASITHISEFVSQISAASQEQSSGIAEIDTAMSQLDKVTQENAAMFEETTAASQNLSRVATDLTGQVQRFSTQSQS
GKQKENIAEFVPRETQTPPQPRTNKAVAAGSGGGAAPVTGWEEF

Sequences:

>Translated_764_residues
MSETIAGMGESVAGGIVLGADGTVLIEEMRDGNSSAALLEAARQALAAGEVTTNLERLVVARPIFMGEDQQLKGVVALDW
QSEILYAVVEEKNRLALMIAFSLTIAMLVVSAFVMRRVVAQPMKDIASSTQKIADGDYESDVTQFKAGNEIQPVSAALSE
FRNTLQASENNRKDAAMKSTALDAGSAAIMIADADFKVVYASRAVLELLKLHRGVIESRISGFDPDNIVGQSIDIFHKKP
DMQRNMLGALGPNGHEANLEMDDITLELKISRIDSEDGERIGYIVEWADVTQQHLNAAVLDSLNENQARAEFDKDGRLVD
ANEQFRDLLGAQSSALDCNFSQTVFVEENPADPSKAMFGEIRIEGHGKVSHLLGGLSPVTYTNGDLKRTVLIAADVTKEK
SEKEAAEAERERLQRDQDAMIASLSDALSELANGDLTVRIKEAFAGSNDRIRQDFNTAIERLDEAIDSVVGGAIEINTEV
ASVASAATELSKRTESQAATLEETAAAISEINASVSSSAQNAKSANEVVGGAQSEAQASGKIVNEAVDAMGRIEKSSTEI
SSIVKVIDDIAFQTNLLALNAGVEAARAGDAGRGFAVVASEVRTLAQRSSEAASEIGALIATSTENVEVGVDLVGKTGNA
LEQIIASITHISEFVSQISAASQEQSSGIAEIDTAMSQLDKVTQENAAMFEETTAASQNLSRVATDLTGQVQRFSTQSQS
GKQKENIAEFVPRETQTPPQPRTNKAVAAGSGGGAAPVTGWEEF
>Mature_763_residues
SETIAGMGESVAGGIVLGADGTVLIEEMRDGNSSAALLEAARQALAAGEVTTNLERLVVARPIFMGEDQQLKGVVALDWQ
SEILYAVVEEKNRLALMIAFSLTIAMLVVSAFVMRRVVAQPMKDIASSTQKIADGDYESDVTQFKAGNEIQPVSAALSEF
RNTLQASENNRKDAAMKSTALDAGSAAIMIADADFKVVYASRAVLELLKLHRGVIESRISGFDPDNIVGQSIDIFHKKPD
MQRNMLGALGPNGHEANLEMDDITLELKISRIDSEDGERIGYIVEWADVTQQHLNAAVLDSLNENQARAEFDKDGRLVDA
NEQFRDLLGAQSSALDCNFSQTVFVEENPADPSKAMFGEIRIEGHGKVSHLLGGLSPVTYTNGDLKRTVLIAADVTKEKS
EKEAAEAERERLQRDQDAMIASLSDALSELANGDLTVRIKEAFAGSNDRIRQDFNTAIERLDEAIDSVVGGAIEINTEVA
SVASAATELSKRTESQAATLEETAAAISEINASVSSSAQNAKSANEVVGGAQSEAQASGKIVNEAVDAMGRIEKSSTEIS
SIVKVIDDIAFQTNLLALNAGVEAARAGDAGRGFAVVASEVRTLAQRSSEAASEIGALIATSTENVEVGVDLVGKTGNAL
EQIIASITHISEFVSQISAASQEQSSGIAEIDTAMSQLDKVTQENAAMFEETTAASQNLSRVATDLTGQVQRFSTQSQSG
KQKENIAEFVPRETQTPPQPRTNKAVAAGSGGGAAPVTGWEEF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein. Note=Localized at the flagellum-bearing pole of the swarmer cell [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=295, Percent_Identity=42.0338983050847, Blast_Score=201, Evalue=2e-52,
Organism=Escherichia coli, GI2367378, Length=321, Percent_Identity=42.6791277258567, Blast_Score=198, Evalue=1e-51,
Organism=Escherichia coli, GI1788195, Length=299, Percent_Identity=41.4715719063545, Blast_Score=194, Evalue=2e-50,
Organism=Escherichia coli, GI1788194, Length=309, Percent_Identity=39.1585760517799, Blast_Score=189, Evalue=5e-49,
Organism=Escherichia coli, GI1789453, Length=226, Percent_Identity=36.7256637168142, Blast_Score=145, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 81145; Mature: 81014

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETIAGMGESVAGGIVLGADGTVLIEEMRDGNSSAALLEAARQALAAGEVTTNLERLVV
CCCCHHCCCCHHCCCEEECCCCCEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ARPIFMGEDQQLKGVVALDWQSEILYAVVEEKNRLALMIAFSLTIAMLVVSAFVMRRVVA
HCCCCCCCCCHHCCEEEECCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
QPMKDIASSTQKIADGDYESDVTQFKAGNEIQPVSAALSEFRNTLQASENNRKDAAMKST
HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ALDAGSAAIMIADADFKVVYASRAVLELLKLHRGVIESRISGFDPDNIVGQSIDIFHKKP
HCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCC
DMQRNMLGALGPNGHEANLEMDDITLELKISRIDSEDGERIGYIVEWADVTQQHLNAAVL
CHHHHHHHHCCCCCCCCCEEECCEEEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHH
DSLNENQARAEFDKDGRLVDANEQFRDLLGAQSSALDCNFSQTVFVEENPADPSKAMFGE
HCCCCCHHHHHHCCCCCEECCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHEEE
IRIEGHGKVSHLLGGLSPVTYTNGDLKRTVLIAADVTKEKSEKEAAEAERERLQRDQDAM
EEEECCCHHHHHHCCCCCCEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
IASLSDALSELANGDLTVRIKEAFAGSNDRIRQDFNTAIERLDEAIDSVVGGAIEINTEV
HHHHHHHHHHHHCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHH
ASVASAATELSKRTESQAATLEETAAAISEINASVSSSAQNAKSANEVVGGAQSEAQASG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KIVNEAVDAMGRIEKSSTEISSIVKVIDDIAFQTNLLALNAGVEAARAGDAGRGFAVVAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHCCCCCCCHHHHHH
EVRTLAQRSSEAASEIGALIATSTENVEVGVDLVGKTGNALEQIIASITHISEFVSQISA
HHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
ASQEQSSGIAEIDTAMSQLDKVTQENAAMFEETTAASQNLSRVATDLTGQVQRFSTQSQS
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GKQKENIAEFVPRETQTPPQPRTNKAVAAGSGGGAAPVTGWEEF
CCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
SETIAGMGESVAGGIVLGADGTVLIEEMRDGNSSAALLEAARQALAAGEVTTNLERLVV
CCCHHCCCCHHCCCEEECCCCCEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ARPIFMGEDQQLKGVVALDWQSEILYAVVEEKNRLALMIAFSLTIAMLVVSAFVMRRVVA
HCCCCCCCCCHHCCEEEECCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
QPMKDIASSTQKIADGDYESDVTQFKAGNEIQPVSAALSEFRNTLQASENNRKDAAMKST
HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ALDAGSAAIMIADADFKVVYASRAVLELLKLHRGVIESRISGFDPDNIVGQSIDIFHKKP
HCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCC
DMQRNMLGALGPNGHEANLEMDDITLELKISRIDSEDGERIGYIVEWADVTQQHLNAAVL
CHHHHHHHHCCCCCCCCCEEECCEEEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHH
DSLNENQARAEFDKDGRLVDANEQFRDLLGAQSSALDCNFSQTVFVEENPADPSKAMFGE
HCCCCCHHHHHHCCCCCEECCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHEEE
IRIEGHGKVSHLLGGLSPVTYTNGDLKRTVLIAADVTKEKSEKEAAEAERERLQRDQDAM
EEEECCCHHHHHHCCCCCCEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
IASLSDALSELANGDLTVRIKEAFAGSNDRIRQDFNTAIERLDEAIDSVVGGAIEINTEV
HHHHHHHHHHHHCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHH
ASVASAATELSKRTESQAATLEETAAAISEINASVSSSAQNAKSANEVVGGAQSEAQASG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KIVNEAVDAMGRIEKSSTEISSIVKVIDDIAFQTNLLALNAGVEAARAGDAGRGFAVVAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHCCCCCCCHHHHHH
EVRTLAQRSSEAASEIGALIATSTENVEVGVDLVGKTGNALEQIIASITHISEFVSQISA
HHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
ASQEQSSGIAEIDTAMSQLDKVTQENAAMFEETTAASQNLSRVATDLTGQVQRFSTQSQS
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GKQKENIAEFVPRETQTPPQPRTNKAVAAGSGGGAAPVTGWEEF
CCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1577276; 11259647 [H]