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The map label for this gene is qor [H]

Identifier: 110680609

GI number: 110680609

Start: 3305534

End: 3306526

Strand: Direct

Name: qor [H]

Synonym: RD1_3439

Alternate gene names: 110680609

Gene position: 3305534-3306526 (Clockwise)

Preceding gene: 110680608

Following gene: 110680613

Centisome position: 79.98

GC content: 61.63

Gene sequence:

>993_bases
ATGCGCGCCATCACATATAACCGCTACGGACCCGCCGATGAGGTCCTTGCCTTGAGTGACCTGCCCAGGCAGCCGCCGGG
ACCCGGCGAAGTACAGGTTGAACTGGCCTATTCAGCCGTGAACCCGTCAGACATCAAGCGGCGGGCCGGTGCGCGCCCGG
GTGAGAACAAACTGCCCTACGACCAGATTTGTCCGCATAATGACGGGTCAGGCACCATCGTCGCCGTTGGCGAAGGCGTG
GACCCTGCCCGCATCGGCGACTCCGTCTGGATTTGGAACGGACAGTTCAACCGCGCTTTGGGCACAGCTGCCGAGGCCAT
CACCCTTGATGCACAACAGGCCGTCACCCTGCCCGCCGGGGTCGACCTGCAAACCGGCGCAAGTCTGGGCATCCCCGGCC
TCACAGCCGCCCATACCGTGTTTGGCGGCGGCAGCATTCGCGGCCAGTCGCTTTTGATCCACGGCGCAAACGGCACTGTT
GGCCACCTCGCCGTGCAACTGGCGAAATGGGGCGGGGCACGCGTGATTGCAACCGCCAGTCCAGCGGGTTTTGAACGCTG
CCGGAAAGCAGGTGCCGACAGCGTCGTCGATTATAATGCCCCAAGCCTCGCGCAAGACTTGCTGGCCATGAACGACGGGC
AGCAATACCACCGGATCATAGATGTCGAATTCGGAGAAAACATCGAAACCAATGCCGCGATCATAGCGGAAAACGGCACC
TTATCGGTCTATGGCTCCGCGAAAAACATGACGCCCGCGATTCCCTTTGGACCCTTGCTGTTCAAGGCCGTCACAATAGA
CATCGCATTGATTTACATACTGAAACCTGATGAGCGCGCCGAGGCAACCGCCCATTTGCTGGCCGCGCTGTCGGCTGGTG
CGCTGCGCTGCCCAACCGCAGAAATCTACACATTGGCGCAAACGGCGCGCGCGCATCAGGCAGTCGAAGCGGGCGGACGC
GAAGGCGCGATCCTCATTGACGTCACCCGCTGA

Upstream 100 bases:

>100_bases
GATTTTGTGGTACTCCCTCAGGTCCTTTGGGTCAGACATGGCCTTGCAGCCCGCGACGTGACACGGCATCGTTTCGTGCA
AGCTGACCGAGGGACTGAAA

Downstream 100 bases:

>100_bases
CACAAAGACGCGGTTTCGGCAGGAATTAACAGATCACATCAATTTTTGTCAAAAACGGGACTTGCACGTCGCCCTGCATC
GTTTTAATTACCGCTCACGT

Product: oxidoreductase, putative

Products: NA

Alternate protein names: NADPH:quinone reductase [H]

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MRAITYNRYGPADEVLALSDLPRQPPGPGEVQVELAYSAVNPSDIKRRAGARPGENKLPYDQICPHNDGSGTIVAVGEGV
DPARIGDSVWIWNGQFNRALGTAAEAITLDAQQAVTLPAGVDLQTGASLGIPGLTAAHTVFGGGSIRGQSLLIHGANGTV
GHLAVQLAKWGGARVIATASPAGFERCRKAGADSVVDYNAPSLAQDLLAMNDGQQYHRIIDVEFGENIETNAAIIAENGT
LSVYGSAKNMTPAIPFGPLLFKAVTIDIALIYILKPDERAEATAHLLAALSAGALRCPTAEIYTLAQTARAHQAVEAGGR
EGAILIDVTR

Sequences:

>Translated_330_residues
MRAITYNRYGPADEVLALSDLPRQPPGPGEVQVELAYSAVNPSDIKRRAGARPGENKLPYDQICPHNDGSGTIVAVGEGV
DPARIGDSVWIWNGQFNRALGTAAEAITLDAQQAVTLPAGVDLQTGASLGIPGLTAAHTVFGGGSIRGQSLLIHGANGTV
GHLAVQLAKWGGARVIATASPAGFERCRKAGADSVVDYNAPSLAQDLLAMNDGQQYHRIIDVEFGENIETNAAIIAENGT
LSVYGSAKNMTPAIPFGPLLFKAVTIDIALIYILKPDERAEATAHLLAALSAGALRCPTAEIYTLAQTARAHQAVEAGGR
EGAILIDVTR
>Mature_330_residues
MRAITYNRYGPADEVLALSDLPRQPPGPGEVQVELAYSAVNPSDIKRRAGARPGENKLPYDQICPHNDGSGTIVAVGEGV
DPARIGDSVWIWNGQFNRALGTAAEAITLDAQQAVTLPAGVDLQTGASLGIPGLTAAHTVFGGGSIRGQSLLIHGANGTV
GHLAVQLAKWGGARVIATASPAGFERCRKAGADSVVDYNAPSLAQDLLAMNDGQQYHRIIDVEFGENIETNAAIIAENGT
LSVYGSAKNMTPAIPFGPLLFKAVTIDIALIYILKPDERAEATAHLLAALSAGALRCPTAEIYTLAQTARAHQAVEAGGR
EGAILIDVTR

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Homo sapiens, GI194239674, Length=321, Percent_Identity=26.791277258567, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI13236495, Length=321, Percent_Identity=26.791277258567, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI194239676, Length=202, Percent_Identity=31.1881188118812, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI18379349, Length=224, Percent_Identity=26.3392857142857, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI47519420, Length=274, Percent_Identity=28.1021897810219, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI22538446, Length=350, Percent_Identity=25.1428571428571, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI22538444, Length=350, Percent_Identity=25.1428571428571, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1790485, Length=330, Percent_Identity=26.6666666666667, Blast_Score=87, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17507255, Length=332, Percent_Identity=27.710843373494, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71988145, Length=356, Percent_Identity=23.5955056179775, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6324486, Length=355, Percent_Identity=25.9154929577465, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR002364 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: =1.6.5.5 [H]

Molecular weight: Translated: 34414; Mature: 34414

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAITYNRYGPADEVLALSDLPRQPPGPGEVQVELAYSAVNPSDIKRRAGARPGENKLPY
CCEEEECCCCCHHHEEEHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCCH
DQICPHNDGSGTIVAVGEGVDPARIGDSVWIWNGQFNRALGTAAEAITLDAQQAVTLPAG
HHCCCCCCCCEEEEEEECCCCHHHCCCEEEEECCCCCHHHHCHHHEEEECCHHEEECCCC
VDLQTGASLGIPGLTAAHTVFGGGSIRGQSLLIHGANGTVGHLAVQLAKWGGARVIATAS
CCCCCCCCCCCCCCCHHHEEECCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECC
PAGFERCRKAGADSVVDYNAPSLAQDLLAMNDGQQYHRIIDVEFGENIETNAAIIAENGT
CHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEEECCE
LSVYGSAKNMTPAIPFGPLLFKAVTIDIALIYILKPDERAEATAHLLAALSAGALRCPTA
EEEEECCCCCCCCCCCHHHHHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCH
EIYTLAQTARAHQAVEAGGREGAILIDVTR
HHHHHHHHHHHHHHHHCCCCCCEEEEEECC
>Mature Secondary Structure
MRAITYNRYGPADEVLALSDLPRQPPGPGEVQVELAYSAVNPSDIKRRAGARPGENKLPY
CCEEEECCCCCHHHEEEHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCCH
DQICPHNDGSGTIVAVGEGVDPARIGDSVWIWNGQFNRALGTAAEAITLDAQQAVTLPAG
HHCCCCCCCCEEEEEEECCCCHHHCCCEEEEECCCCCHHHHCHHHEEEECCHHEEECCCC
VDLQTGASLGIPGLTAAHTVFGGGSIRGQSLLIHGANGTVGHLAVQLAKWGGARVIATAS
CCCCCCCCCCCCCCCHHHEEECCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECC
PAGFERCRKAGADSVVDYNAPSLAQDLLAMNDGQQYHRIIDVEFGENIETNAAIIAENGT
CHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEEECCE
LSVYGSAKNMTPAIPFGPLLFKAVTIDIALIYILKPDERAEATAHLLAALSAGALRCPTA
EEEEECCCCCCCCCCCHHHHHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCH
EIYTLAQTARAHQAVEAGGREGAILIDVTR
HHHHHHHHHHHHHHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]