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The map label for this gene is 110680608

Identifier: 110680608

GI number: 110680608

Start: 3304825

End: 3305361

Strand: Direct

Name: 110680608

Synonym: RD1_3438

Alternate gene names: NA

Gene position: 3304825-3305361 (Clockwise)

Preceding gene: 110680603

Following gene: 110680609

Centisome position: 79.96

GC content: 63.5

Gene sequence:

>537_bases
ATGCAGAATACGGGCCGACCCATTATCGAGTATCTGCGTATCAGCTGCCTTGTGCTGCTGTGCGCCTGCGGGAGCGTGTC
CTTTGCGCGCGCAACCGAGAGTGATGTGGCGACAACCGGGCCGGTCACGAATTTGCCGATGCCGCGTTATGTCTCGATGA
AAGCGTCAGAGGCGAACGTCAGGCGCGGGCCCTCACTGACCCATCGCATCGACTGGGTGTTCAAACGCCGCGACATGCCG
CTGCGCATCGTCGCAGAGCACGGCCACTGGCGCCGGGTGGAGGACCGCGACGGGCAAGGCGGCTGGATCCACTATTCGCT
GCTGTCCGGGGTGCGCACCGTCATCGTCGAGGAAACGCTGACCATTCACAGCCGCCCAAACGCCGAAGCGCCGGTTAACG
CGCGGCTGGAAGCGGGTGTGATTGCGCGGCTGGGAAAATGCAACCCGGACTGGTGCCAGTTGCGTTCAGGCGGATTTCGC
GGATGGAGCCCCAAGACATCGCTTTGGGGTGTTCGCCCTGACGAGCTGCGCGATTGA

Upstream 100 bases:

>100_bases
GACATTTTGATCTCCACGGACTTGGCGCAGGGCCATTTTTTTGTCATGGTGGCGGAACTGACGACGAGGCACAAGAACCT
GTCGCAAGCAAAAGAGCAAA

Downstream 100 bases:

>100_bases
TGCGTCATCCGCAAAACCTGAAGCACCCAATGCTGTGTGAAACCGTGGATGCCGACGCATCAGGTGAAAAGCGATTTTGT
GGTACTCCCTCAGGTCCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MQNTGRPIIEYLRISCLVLLCACGSVSFARATESDVATTGPVTNLPMPRYVSMKASEANVRRGPSLTHRIDWVFKRRDMP
LRIVAEHGHWRRVEDRDGQGGWIHYSLLSGVRTVIVEETLTIHSRPNAEAPVNARLEAGVIARLGKCNPDWCQLRSGGFR
GWSPKTSLWGVRPDELRD

Sequences:

>Translated_178_residues
MQNTGRPIIEYLRISCLVLLCACGSVSFARATESDVATTGPVTNLPMPRYVSMKASEANVRRGPSLTHRIDWVFKRRDMP
LRIVAEHGHWRRVEDRDGQGGWIHYSLLSGVRTVIVEETLTIHSRPNAEAPVNARLEAGVIARLGKCNPDWCQLRSGGFR
GWSPKTSLWGVRPDELRD
>Mature_178_residues
MQNTGRPIIEYLRISCLVLLCACGSVSFARATESDVATTGPVTNLPMPRYVSMKASEANVRRGPSLTHRIDWVFKRRDMP
LRIVAEHGHWRRVEDRDGQGGWIHYSLLSGVRTVIVEETLTIHSRPNAEAPVNARLEAGVIARLGKCNPDWCQLRSGGFR
GWSPKTSLWGVRPDELRD

Specific function: Unknown

COG id: COG3807

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19989; Mature: 19989

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNTGRPIIEYLRISCLVLLCACGSVSFARATESDVATTGPVTNLPMPRYVSMKASEANV
CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
RRGPSLTHRIDWVFKRRDMPLRIVAEHGHWRRVEDRDGQGGWIHYSLLSGVRTVIVEETL
CCCCCHHHHHHHEECCCCCCEEEEECCCCEECCCCCCCCCCEEEHHHHHHHHHHHHHHHE
TIHSRPNAEAPVNARLEAGVIARLGKCNPDWCQLRSGGFRGWSPKTSLWGVRPDELRD
EEECCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHCC
>Mature Secondary Structure
MQNTGRPIIEYLRISCLVLLCACGSVSFARATESDVATTGPVTNLPMPRYVSMKASEANV
CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
RRGPSLTHRIDWVFKRRDMPLRIVAEHGHWRRVEDRDGQGGWIHYSLLSGVRTVIVEETL
CCCCCHHHHHHHEECCCCCCEEEEECCCCEECCCCCCCCCCEEEHHHHHHHHHHHHHHHE
TIHSRPNAEAPVNARLEAGVIARLGKCNPDWCQLRSGGFRGWSPKTSLWGVRPDELRD
EEECCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA