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The map label for this gene is 110680603

Identifier: 110680603

GI number: 110680603

Start: 3297249

End: 3297896

Strand: Direct

Name: 110680603

Synonym: RD1_3433

Alternate gene names: NA

Gene position: 3297249-3297896 (Clockwise)

Preceding gene: 110680602

Following gene: 110680608

Centisome position: 79.78

GC content: 62.65

Gene sequence:

>648_bases
ATGATGAAAAAACTGCCCGCCACTGCCAGTGTCGCGACGCCCGCGTCTGGCGCAAAACTGCACGCCCCCGCCGCTGAGCG
CAACGCGCAAGCCTTGGGCGATTTGCTGCACGATCACGCGCCCAAAACGGGGCATGCGTTGGAAATCGCCAGTGGCACCG
GACAGCATATCATCCATTTTGCGCAGCGCTTTCCCGGTTTGATCTGGCATCCAAGTGAGGTGGACGCCGAGCGGATCGCC
AGCATTTCCGCCTATGCGCGCGAGGCCCGGTTGCCCAATCTGCGCACGCCGCGCCATCTTGATGTCACGCGCGCAGATTG
GGCGGACGCGGTGGGCGGCAAGCAGCTTGTCGTGCTCATCAACCTGCTGCATCTGATCGACGACGCAGCCGCGCAAATGG
CCGTTGCGGGCGCGCTTGCAGCACTGGTGCCCGGTGGACGCTTCGTCCTTTACGGCCCGTTCAAAAGAAACGGTGCCCTC
ATCAGTGACGGCGATGCCCGCTTTCACCACCAGCTGAGCACCGCAAACCCCGACATCGGCTATAAGAACGACGCCGATGT
CGAGCGCTGGCTGACAAGCGCGGGTGCAACTTCTGTGACGCGTGTCGAGATGCCCGCCAACAACCTTGCCTTCATCGCCG
AGGTCTAA

Upstream 100 bases:

>100_bases
ACACCGCCCCCCGCGACCGACAGGATCGAGGAACAGCAGGCATGAAGGGGTTTGCGCGCTCGATTGACACAAGCGATACG
CCTGCCATCCGCCGAACACC

Downstream 100 bases:

>100_bases
CCATCCATACGGATGCGTTCGTTTCGGGGGTCATAGGGGCTGTCTTCGGTTATCTCGGCATCCCACAACTGGTCCAGCAT
CTTCACCTTGAGCCGGGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MMKKLPATASVATPASGAKLHAPAAERNAQALGDLLHDHAPKTGHALEIASGTGQHIIHFAQRFPGLIWHPSEVDAERIA
SISAYAREARLPNLRTPRHLDVTRADWADAVGGKQLVVLINLLHLIDDAAAQMAVAGALAALVPGGRFVLYGPFKRNGAL
ISDGDARFHHQLSTANPDIGYKNDADVERWLTSAGATSVTRVEMPANNLAFIAEV

Sequences:

>Translated_215_residues
MMKKLPATASVATPASGAKLHAPAAERNAQALGDLLHDHAPKTGHALEIASGTGQHIIHFAQRFPGLIWHPSEVDAERIA
SISAYAREARLPNLRTPRHLDVTRADWADAVGGKQLVVLINLLHLIDDAAAQMAVAGALAALVPGGRFVLYGPFKRNGAL
ISDGDARFHHQLSTANPDIGYKNDADVERWLTSAGATSVTRVEMPANNLAFIAEV
>Mature_215_residues
MMKKLPATASVATPASGAKLHAPAAERNAQALGDLLHDHAPKTGHALEIASGTGQHIIHFAQRFPGLIWHPSEVDAERIA
SISAYAREARLPNLRTPRHLDVTRADWADAVGGKQLVVLINLLHLIDDAAAQMAVAGALAALVPGGRFVLYGPFKRNGAL
ISDGDARFHHQLSTANPDIGYKNDADVERWLTSAGATSVTRVEMPANNLAFIAEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI93102387, Length=200, Percent_Identity=34, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI93102401, Length=134, Percent_Identity=37.3134328358209, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI93102391, Length=140, Percent_Identity=35.7142857142857, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71998087, Length=200, Percent_Identity=31.5, Blast_Score=102, Evalue=1e-22,
Organism=Drosophila melanogaster, GI28574095, Length=201, Percent_Identity=29.8507462686567, Blast_Score=93, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22876; Mature: 22876

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKLPATASVATPASGAKLHAPAAERNAQALGDLLHDHAPKTGHALEIASGTGQHIIHF
CCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHH
AQRFPGLIWHPSEVDAERIASISAYAREARLPNLRTPRHLDVTRADWADAVGGKQLVVLI
HHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHH
NLLHLIDDAAAQMAVAGALAALVPGGRFVLYGPFKRNGALISDGDARFHHQLSTANPDIG
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCHHHHHHCCCCCCCC
YKNDADVERWLTSAGATSVTRVEMPANNLAFIAEV
CCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEEEC
>Mature Secondary Structure
MMKKLPATASVATPASGAKLHAPAAERNAQALGDLLHDHAPKTGHALEIASGTGQHIIHF
CCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHH
AQRFPGLIWHPSEVDAERIASISAYAREARLPNLRTPRHLDVTRADWADAVGGKQLVVLI
HHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHH
NLLHLIDDAAAQMAVAGALAALVPGGRFVLYGPFKRNGALISDGDARFHHQLSTANPDIG
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCHHHHHHCCCCCCCC
YKNDADVERWLTSAGATSVTRVEMPANNLAFIAEV
CCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA