Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is yajO [H]

Identifier: 110680602

GI number: 110680602

Start: 3296252

End: 3297193

Strand: Direct

Name: yajO [H]

Synonym: RD1_3432

Alternate gene names: 110680602

Gene position: 3296252-3297193 (Clockwise)

Preceding gene: 110680600

Following gene: 110680603

Centisome position: 79.75

GC content: 60.19

Gene sequence:

>942_bases
ATGAAAAATCACCTGACCAGCCCGAACGGCACCCCCGCCAGTCGCCTCGCCTTTGGCACCATGCAATTTGGCGGCGCTGC
AGATGCCACAGCGTCGCGGGACATGTTTGATGCCTGCCGCGCGAAGGGCATCACTCATTTCGACACCGCACATCTTTATA
CGGGGGGTGCATCGGAAAAACTGCTGGGCGAGATGATCGCCGATCAGCGCGATGATCTGATCATCGCGACCAAAGTCGCC
TATGCGGGCGGGGCCGGGCGCGACAATATTCTGAGCAGCTTCGAAGTCTCACGCCAGCGCTTGAACCTCGATATGGTTGA
TGTGCTTTATCTGCACCGGTTTGACCCGGACACCGACCTGAACGAAAGTTTCGAGACGCTGGCACAGATAAAGGCCAAAG
GACACATCCGCTATGTCGGCGTGTCAAATTTTGCAGCATGGCAAGTGATGAAAGCCATCGCCGTGGCCGCGCGGTTCGAT
CTGCGGGTAGATATTCTGCAACCCATGTACAGCCTCGTGAAGCGTCAGGCGGAGGTTGAAATCCTGCCCATGTGCGCCGA
TCAGGGTGTGGCCTGCGCACCCTATTCCCCGCTTGGCGGCGGGTTGCTGACCGGCAAATACGCCAGCGGCGGTTCAGGTC
GGCTTAGCGAGGATGAACGCTATGCCACGCGATATGGTCAGGATTGGATGCACAGCGCTGCAGAAGACCTCGGCAGGATT
GCCGCCGCCGAAGGGATGCATCCGGCAACACTCGCAGTCGCCTGGGCTGCCGCACATCCGATGGGGCCGACGCCAATCAT
ATCAGCACGCTCGACCACGCAGCTTGCGCCCTCGCTTGCAGCGATTGACACCAAGCTGACGCCCGATCTTTACAACCGGA
TGCGCGCGCTTACCCCGACACCGCCCCCCGCGACCGACAGGATCGAGGAACAGCAGGCATGA

Upstream 100 bases:

>100_bases
GTCGTTTTTATCGACAACAATCATTTTTCGCCCCTGTTTGCGTTTATCTCTTCACGTTTGAACGTTGCATGCGCGCAGTC
TGCGTGCCACTTCTTTTGAC

Downstream 100 bases:

>100_bases
AGGGGTTTGCGCGCTCGATTGACACAAGCGATACGCCTGCCATCCGCCGAACACCATGATGAAAAAACTGCCCGCCACTG
CCAGTGTCGCGACGCCCGCG

Product: oxidoreductase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MKNHLTSPNGTPASRLAFGTMQFGGAADATASRDMFDACRAKGITHFDTAHLYTGGASEKLLGEMIADQRDDLIIATKVA
YAGGAGRDNILSSFEVSRQRLNLDMVDVLYLHRFDPDTDLNESFETLAQIKAKGHIRYVGVSNFAAWQVMKAIAVAARFD
LRVDILQPMYSLVKRQAEVEILPMCADQGVACAPYSPLGGGLLTGKYASGGSGRLSEDERYATRYGQDWMHSAAEDLGRI
AAAEGMHPATLAVAWAAAHPMGPTPIISARSTTQLAPSLAAIDTKLTPDLYNRMRALTPTPPPATDRIEEQQA

Sequences:

>Translated_313_residues
MKNHLTSPNGTPASRLAFGTMQFGGAADATASRDMFDACRAKGITHFDTAHLYTGGASEKLLGEMIADQRDDLIIATKVA
YAGGAGRDNILSSFEVSRQRLNLDMVDVLYLHRFDPDTDLNESFETLAQIKAKGHIRYVGVSNFAAWQVMKAIAVAARFD
LRVDILQPMYSLVKRQAEVEILPMCADQGVACAPYSPLGGGLLTGKYASGGSGRLSEDERYATRYGQDWMHSAAEDLGRI
AAAEGMHPATLAVAWAAAHPMGPTPIISARSTTQLAPSLAAIDTKLTPDLYNRMRALTPTPPPATDRIEEQQA
>Mature_313_residues
MKNHLTSPNGTPASRLAFGTMQFGGAADATASRDMFDACRAKGITHFDTAHLYTGGASEKLLGEMIADQRDDLIIATKVA
YAGGAGRDNILSSFEVSRQRLNLDMVDVLYLHRFDPDTDLNESFETLAQIKAKGHIRYVGVSNFAAWQVMKAIAVAARFD
LRVDILQPMYSLVKRQAEVEILPMCADQGVACAPYSPLGGGLLTGKYASGGSGRLSEDERYATRYGQDWMHSAAEDLGRI
AAAEGMHPATLAVAWAAAHPMGPTPIISARSTTQLAPSLAAIDTKLTPDLYNRMRALTPTPPPATDRIEEQQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Homo sapiens, GI27436964, Length=325, Percent_Identity=30.1538461538462, Blast_Score=122, Evalue=5e-28,
Organism=Homo sapiens, GI27436966, Length=317, Percent_Identity=30.2839116719243, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI27436962, Length=317, Percent_Identity=30.2839116719243, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI4504825, Length=320, Percent_Identity=27.5, Blast_Score=118, Evalue=8e-27,
Organism=Homo sapiens, GI27436969, Length=320, Percent_Identity=27.5, Blast_Score=118, Evalue=8e-27,
Organism=Homo sapiens, GI27436971, Length=328, Percent_Identity=25.9146341463415, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI223718702, Length=202, Percent_Identity=34.6534653465347, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI41152114, Length=301, Percent_Identity=29.2358803986711, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI41327764, Length=204, Percent_Identity=33.8235294117647, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI223718708, Length=162, Percent_Identity=30.8641975308642, Blast_Score=73, Evalue=4e-13,
Organism=Escherichia coli, GI87081735, Length=308, Percent_Identity=32.7922077922078, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1789199, Length=337, Percent_Identity=27.893175074184, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1789375, Length=282, Percent_Identity=29.0780141843972, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1788070, Length=309, Percent_Identity=25.5663430420712, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788081, Length=296, Percent_Identity=27.3648648648649, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787674, Length=208, Percent_Identity=25.9615384615385, Blast_Score=65, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6323998, Length=299, Percent_Identity=27.7591973244147, Blast_Score=103, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6319958, Length=295, Percent_Identity=27.1186440677966, Blast_Score=102, Evalue=8e-23,
Organism=Saccharomyces cerevisiae, GI6325169, Length=319, Percent_Identity=23.5109717868339, Blast_Score=102, Evalue=9e-23,
Organism=Saccharomyces cerevisiae, GI6322615, Length=248, Percent_Identity=27.4193548387097, Blast_Score=90, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6319951, Length=323, Percent_Identity=24.7678018575851, Blast_Score=89, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR020471
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 33730; Mature: 33730

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS00062 ALDOKETO_REDUCTASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNHLTSPNGTPASRLAFGTMQFGGAADATASRDMFDACRAKGITHFDTAHLYTGGASEK
CCCCCCCCCCCCHHHHEEEHHCCCCCCCCCCHHHHHHHHHHCCCCEECCHHEEECCCHHH
LLGEMIADQRDDLIIATKVAYAGGAGRDNILSSFEVSRQRLNLDMVDVLYLHRFDPDTDL
HHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCH
NESFETLAQIKAKGHIRYVGVSNFAAWQVMKAIAVAARFDLRVDILQPMYSLVKRQAEVE
HHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCE
ILPMCADQGVACAPYSPLGGGLLTGKYASGGSGRLSEDERYATRYGQDWMHSAAEDLGRI
EEEEECCCCCEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHH
AAAEGMHPATLAVAWAAAHPMGPTPIISARSTTQLAPSLAAIDTKLTPDLYNRMRALTPT
HHHCCCCHHHHHHHHHHCCCCCCCCEECCCCHHHHCCHHHHHCCCCCHHHHHHHHHCCCC
PPPATDRIEEQQA
CCCCCCCHHHCCC
>Mature Secondary Structure
MKNHLTSPNGTPASRLAFGTMQFGGAADATASRDMFDACRAKGITHFDTAHLYTGGASEK
CCCCCCCCCCCCHHHHEEEHHCCCCCCCCCCHHHHHHHHHHCCCCEECCHHEEECCCHHH
LLGEMIADQRDDLIIATKVAYAGGAGRDNILSSFEVSRQRLNLDMVDVLYLHRFDPDTDL
HHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCH
NESFETLAQIKAKGHIRYVGVSNFAAWQVMKAIAVAARFDLRVDILQPMYSLVKRQAEVE
HHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCE
ILPMCADQGVACAPYSPLGGGLLTGKYASGGSGRLSEDERYATRYGQDWMHSAAEDLGRI
EEEEECCCCCEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHH
AAAEGMHPATLAVAWAAAHPMGPTPIISARSTTQLAPSLAAIDTKLTPDLYNRMRALTPT
HHHCCCCHHHHHHHHHHCCCCCCCCEECCCCHHHHCCHHHHHCCCCCHHHHHHHHHCCCC
PPPATDRIEEQQA
CCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]