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The map label for this gene is 110680550

Identifier: 110680550

GI number: 110680550

Start: 3245354

End: 3246187

Strand: Direct

Name: 110680550

Synonym: RD1_3377

Alternate gene names: NA

Gene position: 3245354-3246187 (Clockwise)

Preceding gene: 110680549

Following gene: 110680551

Centisome position: 78.52

GC content: 57.79

Gene sequence:

>834_bases
ATGCCGGATCAAGACTCCCCTCGCGCGGCGAGGACGCAGGCCCGCTATCACCGGGTCCAGACAGATGTGCTACAACTCAA
ATCACGCCTGCCTCAGGCAGACGTAGGGGATATCGTCTCCGAGGTGTTGAACCGCGTCACCGCGCTCAGAAAAGCCAATG
GCGACAGGGTCAACCTGCCCACACGCCAGAAAGTCGAAAGGCTGTGTTACGCGCTGATCTCGGATGACATGAACGAAGGT
GCCGCGTTCATCCACGATGTGCAGGAAGATGGCGCGACCCTCGAAGCCGTCTATCTGAACTATCTCGCGGAGGCTGCCGC
TATTCTGGGCGAATGGTGGGACGACGACCATGTCACTTTTCTGGAGGTGATCATTGGCAGCAGTCGAATTTACGCGATCA
TGCGGGATCTTGGCTATCTGTTTGTGCCTGACCGACTTGTTGAGGTGAAATCGGCAATCTTTGCAACGGTGCCGCATGAA
ACCCATGTTCTGGGCGTACAGATGGCAGCGGACCTCTTTGGCGCCGAGGGCTGGAACATCGAGGTCATGAGCGGACTGCC
TCATGAAACGCTTGTGGAACAGATCACGCAAAGCCCCTTTCACATTCTCGGCCTGTCAGCGGGCGGCGCTCATTCTGCCG
GCGCATTGGCGCGATTGATTGTTGCGGTGCGGCTGGCAAGACCCGATATGCGCATTTTCCTGAGCGGTCAGATCGTGCGG
ACATCACCGGACCTCGTTGCCGTCATGGATATTGATGGCGCGACCAATGATATCGAAGAGGCCAAACATATCCTGCACGA
CCTTTGGCTGGACTCCAGCGCGCAGGCGGGCTGA

Upstream 100 bases:

>100_bases
TGTCAACTTTTGTTGACACAGATCAAGGATCATCTGTACGCTGGACCTACGATAGATACAGGCTGCTGAAGGATGAACCA
CACTACGGCTGGGGGGCAAA

Downstream 100 bases:

>100_bases
CCCTCACAAGCGGGCCGGCACAGAGGCCAAAAAAATATGCGTATCGGCGTTTTACCTCTTGCAGCGGACCGCCGCTCTAT
GTATCTCCACAGCACCCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MPDQDSPRAARTQARYHRVQTDVLQLKSRLPQADVGDIVSEVLNRVTALRKANGDRVNLPTRQKVERLCYALISDDMNEG
AAFIHDVQEDGATLEAVYLNYLAEAAAILGEWWDDDHVTFLEVIIGSSRIYAIMRDLGYLFVPDRLVEVKSAIFATVPHE
THVLGVQMAADLFGAEGWNIEVMSGLPHETLVEQITQSPFHILGLSAGGAHSAGALARLIVAVRLARPDMRIFLSGQIVR
TSPDLVAVMDIDGATNDIEEAKHILHDLWLDSSAQAG

Sequences:

>Translated_277_residues
MPDQDSPRAARTQARYHRVQTDVLQLKSRLPQADVGDIVSEVLNRVTALRKANGDRVNLPTRQKVERLCYALISDDMNEG
AAFIHDVQEDGATLEAVYLNYLAEAAAILGEWWDDDHVTFLEVIIGSSRIYAIMRDLGYLFVPDRLVEVKSAIFATVPHE
THVLGVQMAADLFGAEGWNIEVMSGLPHETLVEQITQSPFHILGLSAGGAHSAGALARLIVAVRLARPDMRIFLSGQIVR
TSPDLVAVMDIDGATNDIEEAKHILHDLWLDSSAQAG
>Mature_276_residues
PDQDSPRAARTQARYHRVQTDVLQLKSRLPQADVGDIVSEVLNRVTALRKANGDRVNLPTRQKVERLCYALISDDMNEGA
AFIHDVQEDGATLEAVYLNYLAEAAAILGEWWDDDHVTFLEVIIGSSRIYAIMRDLGYLFVPDRLVEVKSAIFATVPHET
HVLGVQMAADLFGAEGWNIEVMSGLPHETLVEQITQSPFHILGLSAGGAHSAGALARLIVAVRLARPDMRIFLSGQIVRT
SPDLVAVMDIDGATNDIEEAKHILHDLWLDSSAQAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30440; Mature: 30309

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDQDSPRAARTQARYHRVQTDVLQLKSRLPQADVGDIVSEVLNRVTALRKANGDRVNLP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEECCC
TRQKVERLCYALISDDMNEGAAFIHDVQEDGATLEAVYLNYLAEAAAILGEWWDDDHVTF
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
LEVIIGSSRIYAIMRDLGYLFVPDRLVEVKSAIFATVPHETHVLGVQMAADLFGAEGWNI
HHHHHCCHHHHHHHHHCCCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCE
EVMSGLPHETLVEQITQSPFHILGLSAGGAHSAGALARLIVAVRLARPDMRIFLSGQIVR
EEECCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECEEEE
TSPDLVAVMDIDGATNDIEEAKHILHDLWLDSSAQAG
CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PDQDSPRAARTQARYHRVQTDVLQLKSRLPQADVGDIVSEVLNRVTALRKANGDRVNLP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEECCC
TRQKVERLCYALISDDMNEGAAFIHDVQEDGATLEAVYLNYLAEAAAILGEWWDDDHVTF
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
LEVIIGSSRIYAIMRDLGYLFVPDRLVEVKSAIFATVPHETHVLGVQMAADLFGAEGWNI
HHHHHCCHHHHHHHHHCCCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCE
EVMSGLPHETLVEQITQSPFHILGLSAGGAHSAGALARLIVAVRLARPDMRIFLSGQIVR
EEECCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECEEEE
TSPDLVAVMDIDGATNDIEEAKHILHDLWLDSSAQAG
CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA