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The map label for this gene is 110680513

Identifier: 110680513

GI number: 110680513

Start: 3200990

End: 3201568

Strand: Direct

Name: 110680513

Synonym: RD1_3335

Alternate gene names: NA

Gene position: 3200990-3201568 (Clockwise)

Preceding gene: 110680512

Following gene: 110680514

Centisome position: 77.45

GC content: 56.3

Gene sequence:

>579_bases
TTGGGTGATGGCCTAAGCTTCACCTCGCTCAGTCTGGATGAGCATGGCCGACGGGGATCATCACATAGACAGCGGCATCC
GCTTCGCATTATCCTCGCAGCCATGGAAACAACTCTCTTTCGCTCATCCGTGATGAACGTGCGCCCCGAGTGGATCGACT
ATAACGGCCATATGAACATGGCCTATTACGCGGTGCTGTTTGATGAAGCCTCCGACGAAATCTACCCCCAGATCGGGTTT
GGCCCGGCATATCAGAAAACCGGCTTCACGACCTACACCGCAGAATTCCACATCTGCTATCTGAGAGAGCTTCATCTACA
TGACCCTGTCACAGTCACGTTGCAGTTGCTGGATTTCGACGCAAAGCGCTTTCACTTCTATCAGGAGATCTGGCACGAGG
ACGGGTGGTGCGCTGCCACCGCCGAAGCCTTGTCGCTGCATGTCGATCAATCCGGTCCGCGCGTTGCCCCGATGCCGCGA
CATATCCTTGATAAACTGCGCAACCTGCATGATGCGCATTCAAGATTGCCCCGCCCCGACAGGGCCGGACGGCAGATCGG
GATCAGGCGCAAGGTCTGA

Upstream 100 bases:

>100_bases
CCGTCTGGCGACATACCTGAAACATCCCGTTACCCGTTGAAACCCTTGATTTCAGGCAGCGTTACGTGATCGAGGTTTTT
CGCATGACCCTTTAGCATCC

Downstream 100 bases:

>100_bases
TTGCACCCCGCAGACAGGTGCCTGAACCGGCGCTGCAAAACGATCTGGCCGCGCAACAGACTTTCAGCCCACCTCATCCA
TTGCTATAGAACGGCGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Superfamily Protein; Thioesterase-Like Protein; 3-Hydroxyacyl-CoA Dehydrogenase C-Terminal Domain Family; Thioesterase Family Protein; Thioesterase-Like; 3-Hydroxyacyl-CoA Dehydrogenase Protein; 3-Hydroxybutyryl-CoA Dehydrogenase; 3-Hydroxyacyl-CoA Dehydrogenase; Lipolytic G-D-S-L; Thioesterase FcbC-Like; 4-Hydroxybenzoyl-CoA Thioesterase

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MGDGLSFTSLSLDEHGRRGSSHRQRHPLRIILAAMETTLFRSSVMNVRPEWIDYNGHMNMAYYAVLFDEASDEIYPQIGF
GPAYQKTGFTTYTAEFHICYLRELHLHDPVTVTLQLLDFDAKRFHFYQEIWHEDGWCAATAEALSLHVDQSGPRVAPMPR
HILDKLRNLHDAHSRLPRPDRAGRQIGIRRKV

Sequences:

>Translated_192_residues
MGDGLSFTSLSLDEHGRRGSSHRQRHPLRIILAAMETTLFRSSVMNVRPEWIDYNGHMNMAYYAVLFDEASDEIYPQIGF
GPAYQKTGFTTYTAEFHICYLRELHLHDPVTVTLQLLDFDAKRFHFYQEIWHEDGWCAATAEALSLHVDQSGPRVAPMPR
HILDKLRNLHDAHSRLPRPDRAGRQIGIRRKV
>Mature_191_residues
GDGLSFTSLSLDEHGRRGSSHRQRHPLRIILAAMETTLFRSSVMNVRPEWIDYNGHMNMAYYAVLFDEASDEIYPQIGFG
PAYQKTGFTTYTAEFHICYLRELHLHDPVTVTLQLLDFDAKRFHFYQEIWHEDGWCAATAEALSLHVDQSGPRVAPMPRH
ILDKLRNLHDAHSRLPRPDRAGRQIGIRRKV

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22213; Mature: 22082

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDGLSFTSLSLDEHGRRGSSHRQRHPLRIILAAMETTLFRSSVMNVRPEWIDYNGHMNM
CCCCCCEEEECHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCE
AYYAVLFDEASDEIYPQIGFGPAYQKTGFTTYTAEFHICYLRELHLHDPVTVTLQLLDFD
EEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCEEEEEEEECCC
AKRFHFYQEIWHEDGWCAATAEALSLHVDQSGPRVAPMPRHILDKLRNLHDAHSRLPRPD
HHHHHHHHHHHCCCCCEEEEHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
RAGRQIGIRRKV
CCCCCCCCEECC
>Mature Secondary Structure 
GDGLSFTSLSLDEHGRRGSSHRQRHPLRIILAAMETTLFRSSVMNVRPEWIDYNGHMNM
CCCCCEEEECHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCE
AYYAVLFDEASDEIYPQIGFGPAYQKTGFTTYTAEFHICYLRELHLHDPVTVTLQLLDFD
EEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCEEEEEEEECCC
AKRFHFYQEIWHEDGWCAATAEALSLHVDQSGPRVAPMPRHILDKLRNLHDAHSRLPRPD
HHHHHHHHHHHCCCCCEEEEHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
RAGRQIGIRRKV
CCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA