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The map label for this gene is 110680512

Identifier: 110680512

GI number: 110680512

Start: 3199757

End: 3200560

Strand: Direct

Name: 110680512

Synonym: RD1_3334

Alternate gene names: NA

Gene position: 3199757-3200560 (Clockwise)

Preceding gene: 110680511

Following gene: 110680513

Centisome position: 77.42

GC content: 52.49

Gene sequence:

>804_bases
TTGGTTGCCAAATCGTTAATTTCTGTCAGAGCTGTAATAGAGATTAAACGGAGTCGACGTATAAATTCTGGTGTCAAATC
ACTCATCGCCGCATCAGCCTTGGCGCTTTGCCTGCCCGCAGTCGCAAGCGCGGCTACAATTATCAATTTTGAAAACGGTT
ATTCTGACGACGAAGAATTGACGTCTCCAACTGAGTTGTTGAACTCTCTTGGCAACGCAAGCGGCGTGACATTGACTGCA
CCCTCTGGAAGCATGACAGTTGAAGCCACCGGATCACCTGGCGGGGATACAATCGGCTTCGTAAACGATACAATGCGTCC
AAACGATACCGACGATGACGCAACTGCGGATTTGGGCAATTTCTTTCTGCGCACGACAAATGCACTAAGCGGTCCGCTCA
ATACAACACCGGTTTTCTCTTTGAGCTTTGCGGGTGGCGCATCCAGCGTATCCGGTGAAATCTGGGATATTGATGGCACA
AGCGTAAACAATACCGAGCAATGGAACGTAACCGCAAACCTTCTGGGAGGCGGATCGTCATCAATTCTCTCCTTCTTGGG
ATCATCGAATGGTAGTAACACCGCCACCTCGCTTGACGGCAAGGCTTGGGCTTTCTCTTTCTCCGGGTTGGGAACCATCA
CGTCGGTTGACTTCAACTTTGTCGGATCAGAAACAACCGGCATTGGCGCCGCAGTGGACAATCTGGTGATTGCGCCGGTG
CCCCTGCCCGCCGGTGGGCTATTGCTGATCTCTGGCTTTGCGGTCGCAGCGGCAGTACGTCGCCGCAGGAAGCCAGCAGC
CTGA

Upstream 100 bases:

>100_bases
AGCAGGGGTGGAAAATCAAACACGCTATACGTGAACCATCCATCAGGTCACTGGTTTGTTGCTTTTCAGCGCCGCGAAAA
GGGGACAAATCAGTGGTGGA

Downstream 100 bases:

>100_bases
TAAAATCTCTTTTGGAAACGATGGGGCCGGCAAAGCGCCGGCCCTTTTTACTGGCCTATGTACTGACCTGGCCCCGCAGC
CAAAATCCGCAGAACATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MVAKSLISVRAVIEIKRSRRINSGVKSLIAASALALCLPAVASAATIINFENGYSDDEELTSPTELLNSLGNASGVTLTA
PSGSMTVEATGSPGGDTIGFVNDTMRPNDTDDDATADLGNFFLRTTNALSGPLNTTPVFSLSFAGGASSVSGEIWDIDGT
SVNNTEQWNVTANLLGGGSSSILSFLGSSNGSNTATSLDGKAWAFSFSGLGTITSVDFNFVGSETTGIGAAVDNLVIAPV
PLPAGGLLLISGFAVAAAVRRRRKPAA

Sequences:

>Translated_267_residues
MVAKSLISVRAVIEIKRSRRINSGVKSLIAASALALCLPAVASAATIINFENGYSDDEELTSPTELLNSLGNASGVTLTA
PSGSMTVEATGSPGGDTIGFVNDTMRPNDTDDDATADLGNFFLRTTNALSGPLNTTPVFSLSFAGGASSVSGEIWDIDGT
SVNNTEQWNVTANLLGGGSSSILSFLGSSNGSNTATSLDGKAWAFSFSGLGTITSVDFNFVGSETTGIGAAVDNLVIAPV
PLPAGGLLLISGFAVAAAVRRRRKPAA
>Mature_267_residues
MVAKSLISVRAVIEIKRSRRINSGVKSLIAASALALCLPAVASAATIINFENGYSDDEELTSPTELLNSLGNASGVTLTA
PSGSMTVEATGSPGGDTIGFVNDTMRPNDTDDDATADLGNFFLRTTNALSGPLNTTPVFSLSFAGGASSVSGEIWDIDGT
SVNNTEQWNVTANLLGGGSSSILSFLGSSNGSNTATSLDGKAWAFSFSGLGTITSVDFNFVGSETTGIGAAVDNLVIAPV
PLPAGGLLLISGFAVAAAVRRRRKPAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27068; Mature: 27068

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAKSLISVRAVIEIKRSRRINSGVKSLIAASALALCLPAVASAATIINFENGYSDDEEL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHC
TSPTELLNSLGNASGVTLTAPSGSMTVEATGSPGGDTIGFVNDTMRPNDTDDDATADLGN
CCHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHH
FFLRTTNALSGPLNTTPVFSLSFAGGASSVSGEIWDIDGTSVNNTEQWNVTANLLGGGSS
HHHHCCHHCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCHH
SILSFLGSSNGSNTATSLDGKAWAFSFSGLGTITSVDFNFVGSETTGIGAAVDNLVIAPV
HHHHHHCCCCCCCCEEECCCCEEEEEECCCCEEEEEEEEECCCCCCCCHHHHCCEEEECC
PLPAGGLLLISGFAVAAAVRRRRKPAA
CCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVAKSLISVRAVIEIKRSRRINSGVKSLIAASALALCLPAVASAATIINFENGYSDDEEL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHC
TSPTELLNSLGNASGVTLTAPSGSMTVEATGSPGGDTIGFVNDTMRPNDTDDDATADLGN
CCHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHH
FFLRTTNALSGPLNTTPVFSLSFAGGASSVSGEIWDIDGTSVNNTEQWNVTANLLGGGSS
HHHHCCHHCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCHH
SILSFLGSSNGSNTATSLDGKAWAFSFSGLGTITSVDFNFVGSETTGIGAAVDNLVIAPV
HHHHHHCCCCCCCCEEECCCCEEEEEECCCCEEEEEEEEECCCCCCCCHHHHCCEEEECC
PLPAGGLLLISGFAVAAAVRRRRKPAA
CCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA