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The map label for this gene is 110680372

Identifier: 110680372

GI number: 110680372

Start: 3054433

End: 3055971

Strand: Direct

Name: 110680372

Synonym: RD1_3188

Alternate gene names: NA

Gene position: 3054433-3055971 (Clockwise)

Preceding gene: 110680370

Following gene: 110680373

Centisome position: 73.9

GC content: 65.43

Gene sequence:

>1539_bases
ATGACACAGACAACAAAGACCCGTGCTGGTGGCCGCTCTGCCCGGCGTGCGGCACGCGCGGCACCGCTGGCCGATCACCT
GCGCCCCATACGCCCCGGTATGGAGGGCGGGCGCTATGCGCCGCTGACCCCGGCGGACGTTGAGCGCATTCACGATGCCG
CCCTTGAGGCGCTGGAAACCATCGGCCTTGCGGATGCCCCGGCGAGCGGGGTTGAGGTGCTGAGCAAGGCGGGCGCGGTT
CAGGGCGCGGATGGGCGCATCCGCTTTCCCCGCGCGCTGATCGAAGACGTGATTGCCGGTGCGAACCGGAGCGTCACGCT
GTGCGCGCGCGACCCGGCGCACGATCTGGATCTGACAGGCACGCGGGTGCATTACGGCACGGCCGGCGCAGCGGTGCATC
TAGTGGATGCAGAGGGGCGGAATTACCGCGAATGCGGTGTGCAGGACCTGCATGACGCGGCACGGATCACGGATGTATTG
CCCAATATCCATTTCCTGCAACGCCCCATGGTGTGCCGCGATATTGCCGACAACCTTGAGATGGACCTCAACACGATCTA
CGCCACCTGTTCGGGCACGACGAAACATATCGGCACGTCTTTCAGCGATCCGGCGCATGTGGCCCCGGCTATCGAAATGC
TGCATATGATCGCCGGGGACGAGGCGGCATGGCGCGCGCGCCCCTTCGTGCTGAATTCGAACTGTTTTGTCGTCCCCCCG
ATGAAATTCGCGACCGAATCCTGCCAGGTGATGGAGGAATGCATCAAGCACGGCATGCCGGTCCTGCTGCTCTCTGCGGG
GATGGCGGGGGCGACGGCCCCATCAACCATTGCGGGGGCGATCGTTCAGGCCACGGCGGAATGTCTGGCCGGTCTGGCCT
ATGTGCACGCGATCAAACCGGGTCATCCGGTGGTCTTTGGCACATGGCCTTTCGGGCTTGATCTGCGCAGTGGCGCGATG
ACGGGCGGGTCGGGGGAACAGGCCCTGCTGACGGCGGGCTGCGCGCAGATGCACAGGTTTTACAACCTGCCCGGCGGGGC
CGCTGCGGGGATTGCGGACAGCAAACTGCCCGACATGCAGGCGGGCTGGGAGCAGATGTGCTCAAACGTGATGGCCGGGC
TTGCGGGGTTGAACATGGTCTATGAGGCGGCGGGCATGCATGCCTCGCTGCTGGGGTTCTGTCACGAATCGCTGATCCTC
GGGGATGATCTGCTGGGACAGGCCATGCGCTGCGTGCGCGGGATCGAGGTCACCGACGAAACCATGGCGCTGGATCAGAT
GCGCACGGTTTGCATGGGCGGTCCGGGGCACTATCTGGGCACTGAGCAGACGCTGGGCCGGATGGAGGCGGATCACGTCT
ACCCCGCCCTTGGCGATCGCAGTTCCCCCAAGGAGTGGGAGGAGAAGGGGAAACCGGACCTGATCGCCAAGGCGCGCGCG
CGCAAGGAAGAGATTCTTGCCCAACGCTCGGCGGCACGGTTCGACCCGGAACTGGACGCCCGGATCAGGGCGCGCTTTAC
CATCCACCTGCCCGCCTGA

Upstream 100 bases:

>100_bases
TCTGGTAATTCGCACAATCGGTGCGGAGCGTGGACGTGCGGCGCGCGGGCGACCTGAACGGCAATAGGCCCCTCATTATT
GCTTTTTCAGGACATGGAAC

Downstream 100 bases:

>100_bases
AAGCGTCTGACGAAATATCCGAAACATCAAACATCACGTGAGGCGTTGAAACCCTTGATGTCAGACAGCGTTAGGTGATC
GCGGTTTTTCGCGTGACGCG

Product: trimethylamine methyltransferase family protein

Products: NA

Alternate protein names: TMA methyltransferase [H]

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MTQTTKTRAGGRSARRAARAAPLADHLRPIRPGMEGGRYAPLTPADVERIHDAALEALETIGLADAPASGVEVLSKAGAV
QGADGRIRFPRALIEDVIAGANRSVTLCARDPAHDLDLTGTRVHYGTAGAAVHLVDAEGRNYRECGVQDLHDAARITDVL
PNIHFLQRPMVCRDIADNLEMDLNTIYATCSGTTKHIGTSFSDPAHVAPAIEMLHMIAGDEAAWRARPFVLNSNCFVVPP
MKFATESCQVMEECIKHGMPVLLLSAGMAGATAPSTIAGAIVQATAECLAGLAYVHAIKPGHPVVFGTWPFGLDLRSGAM
TGGSGEQALLTAGCAQMHRFYNLPGGAAAGIADSKLPDMQAGWEQMCSNVMAGLAGLNMVYEAAGMHASLLGFCHESLIL
GDDLLGQAMRCVRGIEVTDETMALDQMRTVCMGGPGHYLGTEQTLGRMEADHVYPALGDRSSPKEWEEKGKPDLIAKARA
RKEEILAQRSAARFDPELDARIRARFTIHLPA

Sequences:

>Translated_512_residues
MTQTTKTRAGGRSARRAARAAPLADHLRPIRPGMEGGRYAPLTPADVERIHDAALEALETIGLADAPASGVEVLSKAGAV
QGADGRIRFPRALIEDVIAGANRSVTLCARDPAHDLDLTGTRVHYGTAGAAVHLVDAEGRNYRECGVQDLHDAARITDVL
PNIHFLQRPMVCRDIADNLEMDLNTIYATCSGTTKHIGTSFSDPAHVAPAIEMLHMIAGDEAAWRARPFVLNSNCFVVPP
MKFATESCQVMEECIKHGMPVLLLSAGMAGATAPSTIAGAIVQATAECLAGLAYVHAIKPGHPVVFGTWPFGLDLRSGAM
TGGSGEQALLTAGCAQMHRFYNLPGGAAAGIADSKLPDMQAGWEQMCSNVMAGLAGLNMVYEAAGMHASLLGFCHESLIL
GDDLLGQAMRCVRGIEVTDETMALDQMRTVCMGGPGHYLGTEQTLGRMEADHVYPALGDRSSPKEWEEKGKPDLIAKARA
RKEEILAQRSAARFDPELDARIRARFTIHLPA
>Mature_511_residues
TQTTKTRAGGRSARRAARAAPLADHLRPIRPGMEGGRYAPLTPADVERIHDAALEALETIGLADAPASGVEVLSKAGAVQ
GADGRIRFPRALIEDVIAGANRSVTLCARDPAHDLDLTGTRVHYGTAGAAVHLVDAEGRNYRECGVQDLHDAARITDVLP
NIHFLQRPMVCRDIADNLEMDLNTIYATCSGTTKHIGTSFSDPAHVAPAIEMLHMIAGDEAAWRARPFVLNSNCFVVPPM
KFATESCQVMEECIKHGMPVLLLSAGMAGATAPSTIAGAIVQATAECLAGLAYVHAIKPGHPVVFGTWPFGLDLRSGAMT
GGSGEQALLTAGCAQMHRFYNLPGGAAAGIADSKLPDMQAGWEQMCSNVMAGLAGLNMVYEAAGMHASLLGFCHESLILG
DDLLGQAMRCVRGIEVTDETMALDQMRTVCMGGPGHYLGTEQTLGRMEADHVYPALGDRSSPKEWEEKGKPDLIAKARAR
KEEILAQRSAARFDPELDARIRARFTIHLPA

Specific function: Catalyzes probably the transfer of a methyl group from trimethylamine to the corrinoid cofactor of mttC [H]

COG id: COG5598

COG function: function code H; Trimethylamine:corrinoid methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trimethylamine methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010426 [H]

Pfam domain/function: PF06253 MTTB [H]

EC number: NA

Molecular weight: Translated: 54539; Mature: 54408

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS00138 SUBTILASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTTKTRAGGRSARRAARAAPLADHLRPIRPGMEGGRYAPLTPADVERIHDAALEALET
CCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
IGLADAPASGVEVLSKAGAVQGADGRIRFPRALIEDVIAGANRSVTLCARDPAHDLDLTG
HCCCCCCCHHHHHHHHCCCCCCCCCCEECCHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
TRVHYGTAGAAVHLVDAEGRNYRECGVQDLHDAARITDVLPNIHFLQRPMVCRDIADNLE
CEEEECCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHC
MDLNTIYATCSGTTKHIGTSFSDPAHVAPAIEMLHMIAGDEAAWRARPFVLNSNCFVVPP
CCCEEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCEEECCCEEEECC
MKFATESCQVMEECIKHGMPVLLLSAGMAGATAPSTIAGAIVQATAECLAGLAYVHAIKP
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
GHPVVFGTWPFGLDLRSGAMTGGSGEQALLTAGCAQMHRFYNLPGGAAAGIADSKLPDMQ
CCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
AGWEQMCSNVMAGLAGLNMVYEAAGMHASLLGFCHESLILGDDLLGQAMRCVRGIEVTDE
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHH
TMALDQMRTVCMGGPGHYLGTEQTLGRMEADHVYPALGDRSSPKEWEEKGKPDLIAKARA
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHH
RKEEILAQRSAARFDPELDARIRARFTIHLPA
HHHHHHHHHHHHHCCCCCCCEEEEEEEEECCC
>Mature Secondary Structure 
TQTTKTRAGGRSARRAARAAPLADHLRPIRPGMEGGRYAPLTPADVERIHDAALEALET
CCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
IGLADAPASGVEVLSKAGAVQGADGRIRFPRALIEDVIAGANRSVTLCARDPAHDLDLTG
HCCCCCCCHHHHHHHHCCCCCCCCCCEECCHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
TRVHYGTAGAAVHLVDAEGRNYRECGVQDLHDAARITDVLPNIHFLQRPMVCRDIADNLE
CEEEECCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHC
MDLNTIYATCSGTTKHIGTSFSDPAHVAPAIEMLHMIAGDEAAWRARPFVLNSNCFVVPP
CCCEEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCEEECCCEEEECC
MKFATESCQVMEECIKHGMPVLLLSAGMAGATAPSTIAGAIVQATAECLAGLAYVHAIKP
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
GHPVVFGTWPFGLDLRSGAMTGGSGEQALLTAGCAQMHRFYNLPGGAAAGIADSKLPDMQ
CCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
AGWEQMCSNVMAGLAGLNMVYEAAGMHASLLGFCHESLILGDDLLGQAMRCVRGIEVTDE
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHH
TMALDQMRTVCMGGPGHYLGTEQTLGRMEADHVYPALGDRSSPKEWEEKGKPDLIAKARA
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHH
RKEEILAQRSAARFDPELDARIRARFTIHLPA
HHHHHHHHHHHHHCCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA