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The map label for this gene is 110680283

Identifier: 110680283

GI number: 110680283

Start: 2969618

End: 2970883

Strand: Reverse

Name: 110680283

Synonym: RD1_3094

Alternate gene names: NA

Gene position: 2970883-2969618 (Counterclockwise)

Preceding gene: 110680284

Following gene: 110680282

Centisome position: 71.88

GC content: 60.35

Gene sequence:

>1266_bases
ATGACCCTGTTTCGCAAAGCGCGCCACTATGCGCGCAAGCTTTGGGTGCGGGTGGTGCTGATCGGTTTGCTCGCGGTGCT
GGCTGTGGCGCTCAGCCAATGGGTTGAGCTTTATGTGCCCGATACCCTGTCGCGCAGCCTCGATGGCGCGGCGGCAGACC
GCCTGTTGCAACTGATTGCGAGCGCGATGCTGGCGGTGACGATCTTTTCGATCACGGTCATGGTGTCGGTCTATCAATCC
TCCTCCACCCAGTGGACGCCGCGCGTGCACCGCCTGATCATGCAGGACAAGACCACCCAGAACACGCTGGCCGTCTTTAT
CGGGGCCTATGTCTATGCCTTGCTGGGGATCATCCTGCGCGAACTTGGCGTTTACGATGACGATCGTGCCTTCGTGCTGT
TCTGGATGACGGTCTTTGTGCTGGCGGTCATCGTTGTCTATCTGATCCGCTGGGTGCTGCATCTGCAGGATTTCGGTCAA
TTGACCAAGACGACCCGTCAGGTAGAAGCCGTGACCCGCGCGCGGTTCAAGGAGCGTCTGGAGACGCCCTGTCTGGGTGC
CATGCCGCTGGTGGGCGATGTGCCAGAAGGTGCGAAACCGGTAAAGGCATGGGACAGCGGGTATATCCAATGCATCTATC
CCGAAGCCATGAATGCGCTGGCAAAGGAATGCGATGTCACGCTCTATCTGGTGCGTGATATTGGCAGCTATGTGTTTTCC
GGTGATCCGCTGCTTTGCGTGGAGGGGGCGGAAAAAATCCGCAACTGGGACGCGTTTTCTGCGCGGCTGGGTGAGATGCT
CGTGCTGTCCGACCTGCGCAGCTATGATCAGGACCCGCGCTTTGGTCTGCTCGTCCTCGGAGAGATCGGCTCAAAGGCCC
TGTCGCCCGGCATCAATGACCCCGGCACGGCGATTGAAGTCATCACCCGGATCGGCCGTATCTTGACCGGATACGAGGAT
GAAAACTACGCCACGCCCGCCACCCCGCTGGAGCATCTCCATGTCGCGCCGCTGGACCCGGTTGATCTGCTGCGTGATGG
TTTTGCGACCCTTGCGCGTGACGGTGCCGAGGTCGTCGAGGTGCAACAGGCGCTGCAGCAAACATTGGCCCATCTGGTGG
GGCATGATGATCCTAAACTATCCGCTGCCGCATGTGATTTCGCGCAGGAGAGTCTGGCGCGCGCGTTGAACGCCTGCGGC
TTTGATCCGGACCGGGACCGCATAACTGCGAGCGCGCACCCCGAAGTGCGCGGGGACAACAAATAG

Upstream 100 bases:

>100_bases
GGCAAGTTCACCCCTCTTTCTCGCCTGATGGCCAATCATATCTCGCGCTTGTGATCTGAGGTGCTAAGAACAGCACATGG
ATAACGCCAGTTCTTTCACG

Downstream 100 bases:

>100_bases
ACCCGCCTTGTATGCGCGCGACGCGCAATGTCGCAAACCGGCCAACAGCGCGCGCCCCGGCAGGTCAGGGTGGGCCTGTT
ACACGCCATCACCGGGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MTLFRKARHYARKLWVRVVLIGLLAVLAVALSQWVELYVPDTLSRSLDGAAADRLLQLIASAMLAVTIFSITVMVSVYQS
SSTQWTPRVHRLIMQDKTTQNTLAVFIGAYVYALLGIILRELGVYDDDRAFVLFWMTVFVLAVIVVYLIRWVLHLQDFGQ
LTKTTRQVEAVTRARFKERLETPCLGAMPLVGDVPEGAKPVKAWDSGYIQCIYPEAMNALAKECDVTLYLVRDIGSYVFS
GDPLLCVEGAEKIRNWDAFSARLGEMLVLSDLRSYDQDPRFGLLVLGEIGSKALSPGINDPGTAIEVITRIGRILTGYED
ENYATPATPLEHLHVAPLDPVDLLRDGFATLARDGAEVVEVQQALQQTLAHLVGHDDPKLSAAACDFAQESLARALNACG
FDPDRDRITASAHPEVRGDNK

Sequences:

>Translated_421_residues
MTLFRKARHYARKLWVRVVLIGLLAVLAVALSQWVELYVPDTLSRSLDGAAADRLLQLIASAMLAVTIFSITVMVSVYQS
SSTQWTPRVHRLIMQDKTTQNTLAVFIGAYVYALLGIILRELGVYDDDRAFVLFWMTVFVLAVIVVYLIRWVLHLQDFGQ
LTKTTRQVEAVTRARFKERLETPCLGAMPLVGDVPEGAKPVKAWDSGYIQCIYPEAMNALAKECDVTLYLVRDIGSYVFS
GDPLLCVEGAEKIRNWDAFSARLGEMLVLSDLRSYDQDPRFGLLVLGEIGSKALSPGINDPGTAIEVITRIGRILTGYED
ENYATPATPLEHLHVAPLDPVDLLRDGFATLARDGAEVVEVQQALQQTLAHLVGHDDPKLSAAACDFAQESLARALNACG
FDPDRDRITASAHPEVRGDNK
>Mature_420_residues
TLFRKARHYARKLWVRVVLIGLLAVLAVALSQWVELYVPDTLSRSLDGAAADRLLQLIASAMLAVTIFSITVMVSVYQSS
STQWTPRVHRLIMQDKTTQNTLAVFIGAYVYALLGIILRELGVYDDDRAFVLFWMTVFVLAVIVVYLIRWVLHLQDFGQL
TKTTRQVEAVTRARFKERLETPCLGAMPLVGDVPEGAKPVKAWDSGYIQCIYPEAMNALAKECDVTLYLVRDIGSYVFSG
DPLLCVEGAEKIRNWDAFSARLGEMLVLSDLRSYDQDPRFGLLVLGEIGSKALSPGINDPGTAIEVITRIGRILTGYEDE
NYATPATPLEHLHVAPLDPVDLLRDGFATLARDGAEVVEVQQALQQTLAHLVGHDDPKLSAAACDFAQESLARALNACGF
DPDRDRITASAHPEVRGDNK

Specific function: Unknown

COG id: COG4325

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018723 [H]

Pfam domain/function: PF10011 DUF2254 [H]

EC number: NA

Molecular weight: Translated: 46561; Mature: 46430

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure 
TLFRKARHYARKLWVRVVLIGLLAVLAVALSQWVELYVPDTLSRSLDGAAADRLLQLIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHH
SAMLAVTIFSITVMVSVYQSSSTQWTPRVHRLIMQDKTTQNTLAVFIGAYVYALLGIILR
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ELGVYDDDRAFVLFWMTVFVLAVIVVYLIRWVLHLQDFGQLTKTTRQVEAVTRARFKERL
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETPCLGAMPLVGDVPEGAKPVKAWDSGYIQCIYPEAMNALAKECDVTLYLVRDIGSYVFS
CCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHHHHHCC
GDPLLCVEGAEKIRNWDAFSARLGEMLVLSDLRSYDQDPRFGLLVLGEIGSKALSPGIND
CCCEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHCCCCCC
PGTAIEVITRIGRILTGYEDENYATPATPLEHLHVAPLDPVDLLRDGFATLARDGAEVVE
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHH
VQQALQQTLAHLVGHDDPKLSAAACDFAQESLARALNACGFDPDRDRITASAHPEVRGDN
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]