| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is acpP [H]
Identifier: 110680230
GI number: 110680230
Start: 2909112
End: 2909345
Strand: Reverse
Name: acpP [H]
Synonym: RD1_3038
Alternate gene names: 110680230
Gene position: 2909345-2909112 (Counterclockwise)
Preceding gene: 110680231
Following gene: 110680229
Centisome position: 70.39
GC content: 51.71
Gene sequence:
>234_bases ATGAGCGACATCGCAGATCGCGTGAAGAAAATCGTTGTGGAGCACCTTGGTGTCGAAGAAGACAAGGTGGTCGAAAGTGC GTCTTTTATTGACGATCTGGGCGCAGACAGCCTTGATACCGTCGAGCTGGTAATGGCCTTCGAAGAAGAGTTCGGCATCG AAATTCCGGATGATGCGGCAGAAACGATCCAGACTTTTGGCGATGCGGTAAAGTTCATCTCCGACGCGTCCTGA
Upstream 100 bases:
>100_bases ATCGAGCCGCCCTTTGGGGCATGCGCTTGCGTAACCGGTCAAACCGGAGAGTAAGCAACCGAAAGGGGCCAGTGCTGGCC CGAATGAATGAGGGACTATT
Downstream 100 bases:
>100_bases GCGATCGGACGGGCGTTTGCCCTGTTTCGCAGCATTAAAAAGCGTCTCTCTTTCGCGGGGAGGCGCTTTTTTCATGGTCG GATTCGCCAGAGGGTTGAAA
Product: acyl carrier protein
Products: NA
Alternate protein names: ACP [H]
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MSDIADRVKKIVVEHLGVEEDKVVESASFIDDLGADSLDTVELVMAFEEEFGIEIPDDAAETIQTFGDAVKFISDAS
Sequences:
>Translated_77_residues MSDIADRVKKIVVEHLGVEEDKVVESASFIDDLGADSLDTVELVMAFEEEFGIEIPDDAAETIQTFGDAVKFISDAS >Mature_76_residues SDIADRVKKIVVEHLGVEEDKVVESASFIDDLGADSLDTVELVMAFEEEFGIEIPDDAAETIQTFGDAVKFISDAS
Specific function: Carrier of the growing fatty acid chain in fatty acid biosynthesis [H]
COG id: COG0236
COG function: function code IQ; Acyl carrier protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Escherichia coli, GI1787336, Length=74, Percent_Identity=60.8108108108108, Blast_Score=90, Evalue=3e-20, Organism=Drosophila melanogaster, GI17136932, Length=73, Percent_Identity=46.5753424657534, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003231 - InterPro: IPR009081 - InterPro: IPR006163 - InterPro: IPR006162 [H]
Pfam domain/function: PF00550 PP-binding [H]
EC number: NA
Molecular weight: Translated: 8364; Mature: 8233
Theoretical pI: Translated: 3.64; Mature: 3.64
Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS50075 ACP_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIADRVKKIVVEHLGVEEDKVVESASFIDDLGADSLDTVELVMAFEEEFGIEIPDDAA CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHH ETIQTFGDAVKFISDAS HHHHHHHHHHHHHHCCC >Mature Secondary Structure SDIADRVKKIVVEHLGVEEDKVVESASFIDDLGADSLDTVELVMAFEEEFGIEIPDDAA CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHH ETIQTFGDAVKFISDAS HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA