| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110680229
Identifier: 110680229
GI number: 110680229
Start: 2908406
End: 2908939
Strand: Reverse
Name: 110680229
Synonym: RD1_3037
Alternate gene names: NA
Gene position: 2908939-2908406 (Counterclockwise)
Preceding gene: 110680230
Following gene: 110680228
Centisome position: 70.38
GC content: 60.67
Gene sequence:
>534_bases ATGTCGCGCACGATTCCGACGATCAATACGCACCGCCTGACGTTGCGCGGTATGCGGGCCGAGGATTTCAACCGCTTTGC CGAGATATGGGCGATGCCCGAGGTCGTGAGGTATATCGACGGGGAGCCTTGGCCGCGTGGCAAAGCATGGGATGCGTTCC TCAAACATGCGGGCCATTGGCAGATTACCGGTTTCGGGCAATGGGCGATCCTGCGGCATCGTGCGCCGGACATGTCCGGG CAGGTCGGGTTTTTCTATGGCAAACGCGGCCTTGGCCCCGATTTTGATGATACGCCGGAAGCCGGGTGGGCATTGGCGCC TGATGCCCATGGGCAAGGCTATGCAAAGGAAGCGGTACGTGCCGCGCATGACTGGTTTGACCGGGTGGTGACAGGGCGTC TTGTCTGCATGATTGATCCGCGCAACGAGCGGGCGCTGAGGCTTGCTGCAGCGATGGGTTACACGCTGATGCGGGAGGCA CGTTATCAGGGCAATCCGGTGCGCCTTTTTGAGCGCAAGACTCCGCCACAATAA
Upstream 100 bases:
>100_bases CATGGTCGGATTCGCCAGAGGGTTGAAATCTGCGTCATAAATGGGTCTGTTGTAGGGGAGAGGGCGCAAAGCTCCGCACC GCGAACAGAGGCAGATTACC
Downstream 100 bases:
>100_bases CGGGTATGACCGGGGGCGGGGTGCCAAGAGCCCTTGCACAGAAACAACTGCTCAAGGTAAGGGGGAGCAGATTTACACGG GGGTATTGCCATGCGCAGAG
Product: acetyltransferase, putative
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase Gnat Family; Acetyltransferase Protein; Ribosomal-Protein-Alanine Acetyltransferase; Acetyltransferase GNAT Family; GCN5-Like N-Acetyltransferase; GNAT Family Acetyltransferase; Gcn5-Related N-Acetyltransferase; Acetyltranferase; GnaT-Family Acetyltransferase
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSRTIPTINTHRLTLRGMRAEDFNRFAEIWAMPEVVRYIDGEPWPRGKAWDAFLKHAGHWQITGFGQWAILRHRAPDMSG QVGFFYGKRGLGPDFDDTPEAGWALAPDAHGQGYAKEAVRAAHDWFDRVVTGRLVCMIDPRNERALRLAAAMGYTLMREA RYQGNPVRLFERKTPPQ
Sequences:
>Translated_177_residues MSRTIPTINTHRLTLRGMRAEDFNRFAEIWAMPEVVRYIDGEPWPRGKAWDAFLKHAGHWQITGFGQWAILRHRAPDMSG QVGFFYGKRGLGPDFDDTPEAGWALAPDAHGQGYAKEAVRAAHDWFDRVVTGRLVCMIDPRNERALRLAAAMGYTLMREA RYQGNPVRLFERKTPPQ >Mature_176_residues SRTIPTINTHRLTLRGMRAEDFNRFAEIWAMPEVVRYIDGEPWPRGKAWDAFLKHAGHWQITGFGQWAILRHRAPDMSGQ VGFFYGKRGLGPDFDDTPEAGWALAPDAHGQGYAKEAVRAAHDWFDRVVTGRLVCMIDPRNERALRLAAAMGYTLMREAR YQGNPVRLFERKTPPQ
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20266; Mature: 20135
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTIPTINTHRLTLRGMRAEDFNRFAEIWAMPEVVRYIDGEPWPRGKAWDAFLKHAGHW CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCE QITGFGQWAILRHRAPDMSGQVGFFYGKRGLGPDFDDTPEAGWALAPDAHGQGYAKEAVR EEECCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHH AAHDWFDRVVTGRLVCMIDPRNERALRLAAAMGYTLMREARYQGNPVRLFERKTPPQ HHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC >Mature Secondary Structure SRTIPTINTHRLTLRGMRAEDFNRFAEIWAMPEVVRYIDGEPWPRGKAWDAFLKHAGHW CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCE QITGFGQWAILRHRAPDMSGQVGFFYGKRGLGPDFDDTPEAGWALAPDAHGQGYAKEAVR EEECCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHH AAHDWFDRVVTGRLVCMIDPRNERALRLAAAMGYTLMREARYQGNPVRLFERKTPPQ HHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA