Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110680229

Identifier: 110680229

GI number: 110680229

Start: 2908406

End: 2908939

Strand: Reverse

Name: 110680229

Synonym: RD1_3037

Alternate gene names: NA

Gene position: 2908939-2908406 (Counterclockwise)

Preceding gene: 110680230

Following gene: 110680228

Centisome position: 70.38

GC content: 60.67

Gene sequence:

>534_bases
ATGTCGCGCACGATTCCGACGATCAATACGCACCGCCTGACGTTGCGCGGTATGCGGGCCGAGGATTTCAACCGCTTTGC
CGAGATATGGGCGATGCCCGAGGTCGTGAGGTATATCGACGGGGAGCCTTGGCCGCGTGGCAAAGCATGGGATGCGTTCC
TCAAACATGCGGGCCATTGGCAGATTACCGGTTTCGGGCAATGGGCGATCCTGCGGCATCGTGCGCCGGACATGTCCGGG
CAGGTCGGGTTTTTCTATGGCAAACGCGGCCTTGGCCCCGATTTTGATGATACGCCGGAAGCCGGGTGGGCATTGGCGCC
TGATGCCCATGGGCAAGGCTATGCAAAGGAAGCGGTACGTGCCGCGCATGACTGGTTTGACCGGGTGGTGACAGGGCGTC
TTGTCTGCATGATTGATCCGCGCAACGAGCGGGCGCTGAGGCTTGCTGCAGCGATGGGTTACACGCTGATGCGGGAGGCA
CGTTATCAGGGCAATCCGGTGCGCCTTTTTGAGCGCAAGACTCCGCCACAATAA

Upstream 100 bases:

>100_bases
CATGGTCGGATTCGCCAGAGGGTTGAAATCTGCGTCATAAATGGGTCTGTTGTAGGGGAGAGGGCGCAAAGCTCCGCACC
GCGAACAGAGGCAGATTACC

Downstream 100 bases:

>100_bases
CGGGTATGACCGGGGGCGGGGTGCCAAGAGCCCTTGCACAGAAACAACTGCTCAAGGTAAGGGGGAGCAGATTTACACGG
GGGTATTGCCATGCGCAGAG

Product: acetyltransferase, putative

Products: NA

Alternate protein names: Acetyltransferase; Acetyltransferase Gnat Family; Acetyltransferase Protein; Ribosomal-Protein-Alanine Acetyltransferase; Acetyltransferase GNAT Family; GCN5-Like N-Acetyltransferase; GNAT Family Acetyltransferase; Gcn5-Related N-Acetyltransferase; Acetyltranferase; GnaT-Family Acetyltransferase

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSRTIPTINTHRLTLRGMRAEDFNRFAEIWAMPEVVRYIDGEPWPRGKAWDAFLKHAGHWQITGFGQWAILRHRAPDMSG
QVGFFYGKRGLGPDFDDTPEAGWALAPDAHGQGYAKEAVRAAHDWFDRVVTGRLVCMIDPRNERALRLAAAMGYTLMREA
RYQGNPVRLFERKTPPQ

Sequences:

>Translated_177_residues
MSRTIPTINTHRLTLRGMRAEDFNRFAEIWAMPEVVRYIDGEPWPRGKAWDAFLKHAGHWQITGFGQWAILRHRAPDMSG
QVGFFYGKRGLGPDFDDTPEAGWALAPDAHGQGYAKEAVRAAHDWFDRVVTGRLVCMIDPRNERALRLAAAMGYTLMREA
RYQGNPVRLFERKTPPQ
>Mature_176_residues
SRTIPTINTHRLTLRGMRAEDFNRFAEIWAMPEVVRYIDGEPWPRGKAWDAFLKHAGHWQITGFGQWAILRHRAPDMSGQ
VGFFYGKRGLGPDFDDTPEAGWALAPDAHGQGYAKEAVRAAHDWFDRVVTGRLVCMIDPRNERALRLAAAMGYTLMREAR
YQGNPVRLFERKTPPQ

Specific function: Unknown

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20266; Mature: 20135

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTIPTINTHRLTLRGMRAEDFNRFAEIWAMPEVVRYIDGEPWPRGKAWDAFLKHAGHW
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCE
QITGFGQWAILRHRAPDMSGQVGFFYGKRGLGPDFDDTPEAGWALAPDAHGQGYAKEAVR
EEECCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHH
AAHDWFDRVVTGRLVCMIDPRNERALRLAAAMGYTLMREARYQGNPVRLFERKTPPQ
HHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
>Mature Secondary Structure 
SRTIPTINTHRLTLRGMRAEDFNRFAEIWAMPEVVRYIDGEPWPRGKAWDAFLKHAGHW
CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCE
QITGFGQWAILRHRAPDMSGQVGFFYGKRGLGPDFDDTPEAGWALAPDAHGQGYAKEAVR
EEECCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHH
AAHDWFDRVVTGRLVCMIDPRNERALRLAAAMGYTLMREARYQGNPVRLFERKTPPQ
HHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA