Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is yceG [C]

Identifier: 110680227

GI number: 110680227

Start: 2905890

End: 2907056

Strand: Reverse

Name: yceG [C]

Synonym: RD1_3035

Alternate gene names: 110680227

Gene position: 2907056-2905890 (Counterclockwise)

Preceding gene: 110680228

Following gene: 110680226

Centisome position: 70.34

GC content: 61.35

Gene sequence:

>1167_bases
ATGTGGCGGCATATCGCTTCTAATGCAGTGACGATGTTGATTGTGCTGCTGTTTCTGGTGGGCGGCGTCATTCTGTGGGG
CAAATCCCAATACGATGGTGCGGGCCCACTGAGCGAAGCGATGTGTGTGGAAGTGCCCAGTGGCTCAACGATGCGCCGCA
TAAGCGAGACGCTGGAAGACAGCGGAGCCGTGACGTCCAGCGCGATTTTCCGGATGGGCGCGGAATACGCCGATAAAGCC
GACCAGTTGAAGGCGGGCAGCTATCTGGTGCCCCCCGGTGCGTCCATGGCGCAGATCGTGGATACCGTGACCCGGGGCGG
GGCGAGCACCTGCGGAACGGAAGTCGTGTATCGCATAGGCGTAAATCGCGTGAGTGTTCAGTTGCGCGAGTTGAACCCGC
AAACCAATCAGTTCGAAGAAATGGCGAATTTCAATCCCGCCGTGGATGAGACGCCTGACATCTATACAGACCGCAAGGCA
TCTGTGGGGACGCGGTTTCGTGTGGCGCTCGCGGAAGGTGTGACGTCCTGGCAGATCGTTGAGGGGCTGAAGGCGATGGA
TGTGCTGGAGGGGAGTGTCGAGGCGCTGCCGCCTGAAGGGTCGCTGGCACCCGACAGCTATGAGGTGCGCCCGGGCGATC
AGCGCGCAAATGTGGTGGAACGCATGCGCGCCGCACAGGAACGGCGTGTGGCGCGCGTCTGGGAAAACCGGCAGCCGGGT
TTGCCGATCGAGACACCGGAAGAATTGTTGATCCTTGCGTCGATTATTGAAAAGGAAACGGCCGTTGCCGAAGAGCGTCG
GCAGGTGGCGAGCGTCTTTGTGAACCGTCTGAACCGTGGCATGCGTCTGCAGACCGACCCCACCGTGATTTATGGTGTGA
CCGAAGGGAGAGGCGTGCTGGGACGCGGGTTGCGCCAGAGTGAACTGCGCGCCGCCACCCCGTGGAACACCTATGTGATC
GAGGGGCTGCCGCCGACGCCGATCGCCAATCCGGGTCTTGCAAGTCTGGAAGCGGCAGCGGCGCCGCTGGAGACGCCCTA
TATCTTTTTCGTAGCGGACGGGACGGGCGGTCACGCCTTTGCCGAAACGCTTGCGGAGCATAACCGAAACGTCGCACAAT
GGCGCCGGATCGAAGCGGAACGGGCCAATCAGAGTTCTGGCAACTAG

Upstream 100 bases:

>100_bases
CGCCCAATGCCAAGCGCCCGCGTGAAATCAACGTCGCCCTCAGCAACTCATTCGGGTTTGGGGGCACGAATGCGAGTGTT
CTGTTCGGGAAGACCGACTG

Downstream 100 bases:

>100_bases
GGCCATCATTCCGGCGCTTTATCGGGGCATGGGACAGCATGTTTTGGCGCAGACCCGCAGTGTTTGCGCAGTCCTGCAGG
GGTCAAAGGTTAACGGCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MWRHIASNAVTMLIVLLFLVGGVILWGKSQYDGAGPLSEAMCVEVPSGSTMRRISETLEDSGAVTSSAIFRMGAEYADKA
DQLKAGSYLVPPGASMAQIVDTVTRGGASTCGTEVVYRIGVNRVSVQLRELNPQTNQFEEMANFNPAVDETPDIYTDRKA
SVGTRFRVALAEGVTSWQIVEGLKAMDVLEGSVEALPPEGSLAPDSYEVRPGDQRANVVERMRAAQERRVARVWENRQPG
LPIETPEELLILASIIEKETAVAEERRQVASVFVNRLNRGMRLQTDPTVIYGVTEGRGVLGRGLRQSELRAATPWNTYVI
EGLPPTPIANPGLASLEAAAAPLETPYIFFVADGTGGHAFAETLAEHNRNVAQWRRIEAERANQSSGN

Sequences:

>Translated_388_residues
MWRHIASNAVTMLIVLLFLVGGVILWGKSQYDGAGPLSEAMCVEVPSGSTMRRISETLEDSGAVTSSAIFRMGAEYADKA
DQLKAGSYLVPPGASMAQIVDTVTRGGASTCGTEVVYRIGVNRVSVQLRELNPQTNQFEEMANFNPAVDETPDIYTDRKA
SVGTRFRVALAEGVTSWQIVEGLKAMDVLEGSVEALPPEGSLAPDSYEVRPGDQRANVVERMRAAQERRVARVWENRQPG
LPIETPEELLILASIIEKETAVAEERRQVASVFVNRLNRGMRLQTDPTVIYGVTEGRGVLGRGLRQSELRAATPWNTYVI
EGLPPTPIANPGLASLEAAAAPLETPYIFFVADGTGGHAFAETLAEHNRNVAQWRRIEAERANQSSGN
>Mature_388_residues
MWRHIASNAVTMLIVLLFLVGGVILWGKSQYDGAGPLSEAMCVEVPSGSTMRRISETLEDSGAVTSSAIFRMGAEYADKA
DQLKAGSYLVPPGASMAQIVDTVTRGGASTCGTEVVYRIGVNRVSVQLRELNPQTNQFEEMANFNPAVDETPDIYTDRKA
SVGTRFRVALAEGVTSWQIVEGLKAMDVLEGSVEALPPEGSLAPDSYEVRPGDQRANVVERMRAAQERRVARVWENRQPG
LPIETPEELLILASIIEKETAVAEERRQVASVFVNRLNRGMRLQTDPTVIYGVTEGRGVLGRGLRQSELRAATPWNTYVI
EGLPPTPIANPGLASLEAAAAPLETPYIFFVADGTGGHAFAETLAEHNRNVAQWRRIEAERANQSSGN

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=187, Percent_Identity=48.1283422459893, Blast_Score=171, Evalue=9e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 42151; Mature: 42151

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRHIASNAVTMLIVLLFLVGGVILWGKSQYDGAGPLSEAMCVEVPSGSTMRRISETLED
CCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH
SGAVTSSAIFRMGAEYADKADQLKAGSYLVPPGASMAQIVDTVTRGGASTCGTEVVYRIG
CCCHHHHHHHHHCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHC
VNRVSVQLRELNPQTNQFEEMANFNPAVDETPDIYTDRKASVGTRFRVALAEGVTSWQIV
CCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHCCCHHHHH
EGLKAMDVLEGSVEALPPEGSLAPDSYEVRPGDQRANVVERMRAAQERRVARVWENRQPG
HHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LPIETPEELLILASIIEKETAVAEERRQVASVFVNRLNRGMRLQTDPTVIYGVTEGRGVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCHH
GRGLRQSELRAATPWNTYVIEGLPPTPIANPGLASLEAAAAPLETPYIFFVADGTGGHAF
HCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHH
AETLAEHNRNVAQWRRIEAERANQSSGN
HHHHHHHCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MWRHIASNAVTMLIVLLFLVGGVILWGKSQYDGAGPLSEAMCVEVPSGSTMRRISETLED
CCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH
SGAVTSSAIFRMGAEYADKADQLKAGSYLVPPGASMAQIVDTVTRGGASTCGTEVVYRIG
CCCHHHHHHHHHCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHC
VNRVSVQLRELNPQTNQFEEMANFNPAVDETPDIYTDRKASVGTRFRVALAEGVTSWQIV
CCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHCCCHHHHH
EGLKAMDVLEGSVEALPPEGSLAPDSYEVRPGDQRANVVERMRAAQERRVARVWENRQPG
HHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LPIETPEELLILASIIEKETAVAEERRQVASVFVNRLNRGMRLQTDPTVIYGVTEGRGVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCHH
GRGLRQSELRAATPWNTYVIEGLPPTPIANPGLASLEAAAAPLETPYIFFVADGTGGHAF
HCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHH
AETLAEHNRNVAQWRRIEAERANQSSGN
HHHHHHHCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]