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The map label for this gene is 110680226

Identifier: 110680226

GI number: 110680226

Start: 2903999

End: 2905369

Strand: Reverse

Name: 110680226

Synonym: RD1_3034

Alternate gene names: NA

Gene position: 2905369-2903999 (Counterclockwise)

Preceding gene: 110680227

Following gene: 110680225

Centisome position: 70.3

GC content: 60.1

Gene sequence:

>1371_bases
ATGCCCTCGACCTCGAGCGGGCACGCGCTGAGATTGGGTGCAAGCTGGATCGTCTCCGCTGCACCGCACGTCCAAGACCA
ATTTCTGAATGAACTGAGTGAGGGAGAGCTTCTGGCTCTCCCTTATCTCTTTGAGTTTTGGGCCATGGAACATCAGTTGC
CGCCAGAGGGAGACTGGCGCACCTGGGTGATCATGGGCGGACGGGGTGCCGGTAAGACACGTGCTGGTGCCGAATGGGTG
CGTGCACAGGTCGAAGGCGCACGGCCTTTGGATGAGGGCCGTTCCCGGCGCGTTGCTTTGGTTGGGGAGACCATTGAGCA
AGTGCGAGAAGTCATGATTTTTGGCGACAGTGGCATACTGGCCTGTTCGCCACCCGACAGACGCCCGGTTTGGGAAGCAG
GACGCAAGCGTCTTGTCTGGCCAAACGGGGCGATTGCCACCATTCACTCCGCCTTTGATCCGGAAGGATTGCGGGGGCCG
CAATTTGATGCGGCCTGGGTCGATGAATTGGCCAAATGGAAAAAAGCACAAGATACGTGGGATATGTTGCAGTTTGCGCT
GCGCCTTGGCGACAAGCCACAGGTGTGTGTCACCACAACACCGCGCAATGTAGGCGTTCTCAAAACGCTGATGAAATCAC
CATCGACCGTATCCAGCCATGCGCCGACAGAGGCGAATGCGGCCAATCTTGCGCGGTCGTTCCTTGAGGAAGTGCGCGCG
CGCTATGCCGGCACCCGGCTGGGGCGTCAGGAACTGGATGGCGTTTTGTTGGAAGATGCAGAAGGCGCGCTTTGGACGAC
GGCGGGCATTGAAGGTATCAGGTGCGAACAGGCACCCGAGCTTGACCGTATCGTCGTGGCAGTTGACCCCTCGACCACGT
CTGGCGCGAATTCGGACGAATGCGGGATCATCGTTGCAGGGGTCAAAATGGCAGGTGCACCGCAAGACTGGCGCGCCTAT
GTTCTGGCCGATTGCACGGTACAAGGTGCAAGCCCCGCAGGATGGGCGCAGGCCGCCATTGCGGCGATGGAGCGTTTCGG
CGCGGATAGGCTGGTCGCAGAGGTCAATCAGGGGGGGCAGATGGTGGCAGAAGTGCTGCGTCAGGTCGACCCTTTGGTGC
CCTACAAGGGCGTGCATGCCAGTCGCGGAAAAGTTGCCCGGGCAGAGCCTGTTGCAGCTCTGTATGAACAGGGGCGTGTG
CGTCATTTACGAGACTTGGGCGCGCTGGAAGATCAAATGTGCCGCATGACGGTGCAGGGATACGAAGGGCAGGGTTCACC
GGACCGGGTTGATGCCTTGGTTTGGGCTTTGCACGAACTGATGATTGAGCCCGTCGCCAAATGGCGCGCGCCCCGTGTCC
GGTCGCTTTGA

Upstream 100 bases:

>100_bases
ACGGTGGCTTCGGCAACGACGCTGCTGAAAACCTGTCAAGAAGTGGAGAACCGTCTTGTCGAATGTCGCAGCAAATCAGC
CGGAATCGCACGAGGGGGCT

Downstream 100 bases:

>100_bases
GCGCCTTACCAAACAGTTAATGCCGCGGGCGTCTAGCTGACGTTTTTGACAGCATTTTAAACGATATTGATCCCAACAAA
TCCGAACAGATTTGAAACCG

Product: hypothetical protein

Products: NA

Alternate protein names: Large Terminase; Terminase Large Subunit; Large Terminase Phage Packaging Protein; Terminase-Like Family Protein; Phage Protein-Like

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MPSTSSGHALRLGASWIVSAAPHVQDQFLNELSEGELLALPYLFEFWAMEHQLPPEGDWRTWVIMGGRGAGKTRAGAEWV
RAQVEGARPLDEGRSRRVALVGETIEQVREVMIFGDSGILACSPPDRRPVWEAGRKRLVWPNGAIATIHSAFDPEGLRGP
QFDAAWVDELAKWKKAQDTWDMLQFALRLGDKPQVCVTTTPRNVGVLKTLMKSPSTVSSHAPTEANAANLARSFLEEVRA
RYAGTRLGRQELDGVLLEDAEGALWTTAGIEGIRCEQAPELDRIVVAVDPSTTSGANSDECGIIVAGVKMAGAPQDWRAY
VLADCTVQGASPAGWAQAAIAAMERFGADRLVAEVNQGGQMVAEVLRQVDPLVPYKGVHASRGKVARAEPVAALYEQGRV
RHLRDLGALEDQMCRMTVQGYEGQGSPDRVDALVWALHELMIEPVAKWRAPRVRSL

Sequences:

>Translated_456_residues
MPSTSSGHALRLGASWIVSAAPHVQDQFLNELSEGELLALPYLFEFWAMEHQLPPEGDWRTWVIMGGRGAGKTRAGAEWV
RAQVEGARPLDEGRSRRVALVGETIEQVREVMIFGDSGILACSPPDRRPVWEAGRKRLVWPNGAIATIHSAFDPEGLRGP
QFDAAWVDELAKWKKAQDTWDMLQFALRLGDKPQVCVTTTPRNVGVLKTLMKSPSTVSSHAPTEANAANLARSFLEEVRA
RYAGTRLGRQELDGVLLEDAEGALWTTAGIEGIRCEQAPELDRIVVAVDPSTTSGANSDECGIIVAGVKMAGAPQDWRAY
VLADCTVQGASPAGWAQAAIAAMERFGADRLVAEVNQGGQMVAEVLRQVDPLVPYKGVHASRGKVARAEPVAALYEQGRV
RHLRDLGALEDQMCRMTVQGYEGQGSPDRVDALVWALHELMIEPVAKWRAPRVRSL
>Mature_455_residues
PSTSSGHALRLGASWIVSAAPHVQDQFLNELSEGELLALPYLFEFWAMEHQLPPEGDWRTWVIMGGRGAGKTRAGAEWVR
AQVEGARPLDEGRSRRVALVGETIEQVREVMIFGDSGILACSPPDRRPVWEAGRKRLVWPNGAIATIHSAFDPEGLRGPQ
FDAAWVDELAKWKKAQDTWDMLQFALRLGDKPQVCVTTTPRNVGVLKTLMKSPSTVSSHAPTEANAANLARSFLEEVRAR
YAGTRLGRQELDGVLLEDAEGALWTTAGIEGIRCEQAPELDRIVVAVDPSTTSGANSDECGIIVAGVKMAGAPQDWRAYV
LADCTVQGASPAGWAQAAIAAMERFGADRLVAEVNQGGQMVAEVLRQVDPLVPYKGVHASRGKVARAEPVAALYEQGRVR
HLRDLGALEDQMCRMTVQGYEGQGSPDRVDALVWALHELMIEPVAKWRAPRVRSL

Specific function: Unknown

COG id: COG5323

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49718; Mature: 49587

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSTSSGHALRLGASWIVSAAPHVQDQFLNELSEGELLALPYLFEFWAMEHQLPPEGDWR
CCCCCCCCEEEECCHHHHHCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCE
TWVIMGGRGAGKTRAGAEWVRAQVEGARPLDEGRSRRVALVGETIEQVREVMIFGDSGIL
EEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHEEECCCCEE
ACSPPDRRPVWEAGRKRLVWPNGAIATIHSAFDPEGLRGPQFDAAWVDELAKWKKAQDTW
ECCCCCCCCHHHHCCCEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHH
DMLQFALRLGDKPQVCVTTTPRNVGVLKTLMKSPSTVSSHAPTEANAANLARSFLEEVRA
HHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RYAGTRLGRQELDGVLLEDAEGALWTTAGIEGIRCEQAPELDRIVVAVDPSTTSGANSDE
HHHHHHCCHHHHCCEEEECCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
CGIIVAGVKMAGAPQDWRAYVLADCTVQGASPAGWAQAAIAAMERFGADRLVAEVNQGGQ
CCEEEECCEECCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCHH
MVAEVLRQVDPLVPYKGVHASRGKVARAEPVAALYEQGRVRHLRDLGALEDQMCRMTVQG
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
YEGQGSPDRVDALVWALHELMIEPVAKWRAPRVRSL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PSTSSGHALRLGASWIVSAAPHVQDQFLNELSEGELLALPYLFEFWAMEHQLPPEGDWR
CCCCCCCEEEECCHHHHHCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCE
TWVIMGGRGAGKTRAGAEWVRAQVEGARPLDEGRSRRVALVGETIEQVREVMIFGDSGIL
EEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHEEECCCCEE
ACSPPDRRPVWEAGRKRLVWPNGAIATIHSAFDPEGLRGPQFDAAWVDELAKWKKAQDTW
ECCCCCCCCHHHHCCCEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHH
DMLQFALRLGDKPQVCVTTTPRNVGVLKTLMKSPSTVSSHAPTEANAANLARSFLEEVRA
HHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RYAGTRLGRQELDGVLLEDAEGALWTTAGIEGIRCEQAPELDRIVVAVDPSTTSGANSDE
HHHHHHCCHHHHCCEEEECCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
CGIIVAGVKMAGAPQDWRAYVLADCTVQGASPAGWAQAAIAAMERFGADRLVAEVNQGGQ
CCEEEECCEECCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCHH
MVAEVLRQVDPLVPYKGVHASRGKVARAEPVAALYEQGRVRHLRDLGALEDQMCRMTVQG
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
YEGQGSPDRVDALVWALHELMIEPVAKWRAPRVRSL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA