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The map label for this gene is 110680223

Identifier: 110680223

GI number: 110680223

Start: 2901867

End: 2902424

Strand: Reverse

Name: 110680223

Synonym: RD1_3030

Alternate gene names: NA

Gene position: 2902424-2901867 (Counterclockwise)

Preceding gene: 110680224

Following gene: 110680222

Centisome position: 70.22

GC content: 58.6

Gene sequence:

>558_bases
ATGGATACAGAGACCGGACTAGAACGGAAGTTCGCACGTTTTGGCGATGGGCTGGAAGTGCAGGACGGCAGTGTCATTGC
TGGCTACGCAAGCCTTTTTGGGGCGGTGGATCAGGGGAATGACGTGGTTGAGCCTGGTGCATATGCCGCATCCCTTGCTG
CTCTGGGTGAGAAAGGCGCGCGGGTCAAGATGCTGTGGCAACATGATCCGACGCAGCCGATCGGGACCTGGGATGAGGTG
CGCGAAGACGGCAAGGGCCTTTGGGTAAAGGGTCGTTTGTTGGACAGTGTTGCAAAGGGGCGCGAAGCCATGGCCCTGAT
TGAAGCCGGTGCGATTGACGGGTTGTCGATCGGATACCGTACCCGCAAAGCCACAAAGAATTCCAAGGGCCAGCGGCTCT
TGACCGAACTGGAACTTTGGGAGGTGTCGCTTGTGACGTTTCCAATGTTACCCAGCGCGCGAATTACGGCCAAGTCCGAA
GAGACGGATCTGGATCGTTCTTTGCGTGACATGGCGGCCGCCTTTGAAGGCGCGCGCGCTGAATTGGCGCGCCGCTGA

Upstream 100 bases:

>100_bases
GGTCTACGGCATCGTCGCGGTGATCTTGAGTCAGGGGCTGCAGTCGATCCTCGCGGCTGTGCCCTAGGGTATTGGTGCCA
GAAATTTAAGGAGACTTTCG

Downstream 100 bases:

>100_bases
TGCGCTCCTGTCGTTGCGGTCTGGCGAGAACGTCTGACCTGAACACTTAAATCTAAGGGAAATTGCCATGCGCAAGACCG
AAGCAAAAGCGGCGGGCGGG

Product: phage prohead protease, putative

Products: NA

Alternate protein names: HK97 Family Phage Prohead Protease; Peptidase; Prohead Peptidase; Caudovirus Prohead Protease; Phage Prohead Protease And Phage Capsid Protein; HK97 Family Phage Capsid Protein; Head Maturation Protease; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Head Maturation Protease; Phage Protease; Phage Pro-Head Protease

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MDTETGLERKFARFGDGLEVQDGSVIAGYASLFGAVDQGNDVVEPGAYAASLAALGEKGARVKMLWQHDPTQPIGTWDEV
REDGKGLWVKGRLLDSVAKGREAMALIEAGAIDGLSIGYRTRKATKNSKGQRLLTELELWEVSLVTFPMLPSARITAKSE
ETDLDRSLRDMAAAFEGARAELARR

Sequences:

>Translated_185_residues
MDTETGLERKFARFGDGLEVQDGSVIAGYASLFGAVDQGNDVVEPGAYAASLAALGEKGARVKMLWQHDPTQPIGTWDEV
REDGKGLWVKGRLLDSVAKGREAMALIEAGAIDGLSIGYRTRKATKNSKGQRLLTELELWEVSLVTFPMLPSARITAKSE
ETDLDRSLRDMAAAFEGARAELARR
>Mature_185_residues
MDTETGLERKFARFGDGLEVQDGSVIAGYASLFGAVDQGNDVVEPGAYAASLAALGEKGARVKMLWQHDPTQPIGTWDEV
REDGKGLWVKGRLLDSVAKGREAMALIEAGAIDGLSIGYRTRKATKNSKGQRLLTELELWEVSLVTFPMLPSARITAKSE
ETDLDRSLRDMAAAFEGARAELARR

Specific function: Unknown

COG id: COG3740

COG function: function code R; Phage head maturation protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20084; Mature: 20084

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTETGLERKFARFGDGLEVQDGSVIAGYASLFGAVDQGNDVVEPGAYAASLAALGEKGA
CCCCHHHHHHHHHHCCCCEECCCCEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC
RVKMLWQHDPTQPIGTWDEVREDGKGLWVKGRLLDSVAKGREAMALIEAGAIDGLSIGYR
EEEEEECCCCCCCCCCHHHHHHCCCCEEEEHHHHHHHHCCHHHHHHHHHCCCCCCCCCCH
TRKATKNSKGQRLLTELELWEVSLVTFPMLPSARITAKSEETDLDRSLRDMAAAFEGARA
HHHHCCCCCHHHHHHHHHHHHHEEHEECCCCCCEEECCCCHHHHHHHHHHHHHHHCCHHH
ELARR
HHHCC
>Mature Secondary Structure
MDTETGLERKFARFGDGLEVQDGSVIAGYASLFGAVDQGNDVVEPGAYAASLAALGEKGA
CCCCHHHHHHHHHHCCCCEECCCCEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC
RVKMLWQHDPTQPIGTWDEVREDGKGLWVKGRLLDSVAKGREAMALIEAGAIDGLSIGYR
EEEEEECCCCCCCCCCHHHHHHCCCCEEEEHHHHHHHHCCHHHHHHHHHCCCCCCCCCCH
TRKATKNSKGQRLLTELELWEVSLVTFPMLPSARITAKSEETDLDRSLRDMAAAFEGARA
HHHHCCCCCHHHHHHHHHHHHHEEHEECCCCCCEEECCCCHHHHHHHHHHHHHHHCCHHH
ELARR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA