Click here to switch to the map view.

The map label for this gene is grxC2 [H]

Identifier: 110680178

GI number: 110680178

Start: 2855463

End: 2855825

Strand: Direct

Name: grxC2 [H]

Synonym: RD1_2979

Alternate gene names: 110680178

Gene position: 2855463-2855825 (Clockwise)

Preceding gene: 110680177

Following gene: 110680181

Centisome position: 69.09

GC content: 53.44

Gene sequence:

>363_bases
ATGACCGAGACAACAACCAGGATCCAGGAAACAATCACCGCCAACGATGTTGTGCTTTTCATGAAAGGCACGAAAGAGAT
GCCGCAATGCGGGTTTTCCAGCCGAGTAGCGGGCGTGTTGAACTACATGGGGGTGGATTTTTCCGATGTGAACGTGCTCT
CGGATGAGTCGATCCGTCAGGGGATCAAGGATTTTTCCGACTGGCCCACGATCCCGCAACTCTATGTCAAAGGTGAATTC
GTCGGCGGCTGCGACATCATCACCGAAATGACGCTATCGGGCGAGTTGGACACGCTGTTTGCGGAAAACGGTATATCGTT
CGACAAGGACGCGGCGGATAAGATCCGCGAAGCCAACGGCTAA

Upstream 100 bases:

>100_bases
TTTTCAAGATCACGGACACCCCGGTGGTTCCGCTGAAAGATGATGAAACCTACGCTGCGCGATACCATCGCGCGTACAAC
CAGAAAAAAGGCACCTCAAA

Downstream 100 bases:

>100_bases
GCACCGCCCCTCACTGCTGATCAAGCGCTGTCCGTTCGGGCAGCGCTTTTTCGTTTACCCCGCGACCTTTTCATCGACCG
ATGCGGCCAGTGCCTCGGCC

Product: glutaredoxin-like protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MTETTTRIQETITANDVVLFMKGTKEMPQCGFSSRVAGVLNYMGVDFSDVNVLSDESIRQGIKDFSDWPTIPQLYVKGEF
VGGCDIITEMTLSGELDTLFAENGISFDKDAADKIREANG

Sequences:

>Translated_120_residues
MTETTTRIQETITANDVVLFMKGTKEMPQCGFSSRVAGVLNYMGVDFSDVNVLSDESIRQGIKDFSDWPTIPQLYVKGEF
VGGCDIITEMTLSGELDTLFAENGISFDKDAADKIREANG
>Mature_119_residues
TETTTRIQETITANDVVLFMKGTKEMPQCGFSSRVAGVLNYMGVDFSDVNVLSDESIRQGIKDFSDWPTIPQLYVKGEFV
GGCDIITEMTLSGELDTLFAENGISFDKDAADKIREANG

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=101, Percent_Identity=49.5049504950495, Blast_Score=111, Evalue=1e-25,
Organism=Homo sapiens, GI95113651, Length=93, Percent_Identity=48.3870967741936, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1787943, Length=113, Percent_Identity=39.8230088495575, Blast_Score=107, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17556042, Length=104, Percent_Identity=53.8461538461538, Blast_Score=124, Evalue=9e-30,
Organism=Caenorhabditis elegans, GI71988153, Length=86, Percent_Identity=45.3488372093023, Blast_Score=99, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI71988159, Length=85, Percent_Identity=41.1764705882353, Blast_Score=92, Evalue=7e-20,
Organism=Saccharomyces cerevisiae, GI6325198, Length=104, Percent_Identity=55.7692307692308, Blast_Score=120, Evalue=4e-29,
Organism=Saccharomyces cerevisiae, GI6320303, Length=103, Percent_Identity=44.6601941747573, Blast_Score=99, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6321022, Length=84, Percent_Identity=48.8095238095238, Blast_Score=98, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24642023, Length=96, Percent_Identity=47.9166666666667, Blast_Score=111, Evalue=8e-26,
Organism=Drosophila melanogaster, GI19921242, Length=92, Percent_Identity=43.4782608695652, Blast_Score=101, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 13185; Mature: 13054

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETTTRIQETITANDVVLFMKGTKEMPQCGFSSRVAGVLNYMGVDFSDVNVLSDESIRQ
CCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHH
GIKDFSDWPTIPQLYVKGEFVGGCDIITEMTLSGELDTLFAENGISFDKDAADKIREANG
HHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
TETTTRIQETITANDVVLFMKGTKEMPQCGFSSRVAGVLNYMGVDFSDVNVLSDESIRQ
CCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHH
GIKDFSDWPTIPQLYVKGEFVGGCDIITEMTLSGELDTLFAENGISFDKDAADKIREANG
HHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA