| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is cysI [H]
Identifier: 110680165
GI number: 110680165
Start: 2843155
End: 2844819
Strand: Direct
Name: cysI [H]
Synonym: RD1_2966
Alternate gene names: 110680165
Gene position: 2843155-2844819 (Clockwise)
Preceding gene: 110680164
Following gene: 110680166
Centisome position: 68.79
GC content: 60.84
Gene sequence:
>1665_bases ATGTATAAGTACACCGATTTCGACGCGGCTTTCATCAAGGAGCGCAACGCCCAGTTCCGCAGCCAGGTCGAGCGGCGCAT TGACGGCTCGCTTACCGAAGATGAATTCAAGCCCCTGCGCCTGATGAACGGGCTGTATCTGCAACTGCATGCTTACATGC TGCGGGTCGCCATTCCCTATGGGACGCTGAACGGGCGTCAAATGGACAAGCTGGCCGATATCGCCGATCGCTGGGACAAG GGCTATGGCCATTTCACCACGCGGCAGAACATCCAGTTCAACTGGCCTGAATTGCGGGACATCCCTGATATGCTGGACGC GCTCGCGGAGGTGCAGATGCATGCGATCCAGACGTCAGGCAACACCATTCGCAACGTGACTGCGGATCATTTCGCCGGGG CCGCCGCCGATGAGATCGCCGATCCGCGCCCGGTGGCGGAGCTGATCCGGCAATGGTCCACCGACCATCCGGAGTTCCAG TTCCTGCCCCGCAAGTTCAAAGTCGCCGTGACCGGATCGCCCAATGACCGCGCCGTGACCAAGGCACATGACATCGGGTT GCGCATGCTGGAACGCGATGGCGTGGCCGGGTTCGAGGTTATCGTGGGCGGTGGCCTCGGGCGCACCCCCATGATCGGCA AGGTGCTCAGGGATTTCCTGCCGCGCGAAGACCTGCTGCCCTATCTCGAAGCCATCGTGAGCGTCTACAACCTGCTGGGA CGGCGTGACAACAAGTACAAGGCCCGCATCAAGATCACCGTGCATGAAAACGGCATCGACGATTTCCGCGCGCGGGTAGA GGAACGCTTTGCGCTGATCCGTCCGCAGTTCGGCGGCATTGATCAACAGCTTCTGGCCGGCATCGAGGCGGATTTCGCAG CCCCCGATTTCAAAACAAAGCCAGTGGCGGATTTCGAGGCTGCCTATACCAATGATCCGGTCTTCCGGTCCTGGGCCGAC ACCAACCTGACGGACCACCGCGCCCCGGGCTATGCGATTGTTTCGATCAGCCTCAAGGCGCATGCCGCCACCCCCGGCGA TGCCACCTCAGCGCAGATGCGCGTGATGGCAGACCTTGCGCGCGACTACGGGCATGATGAATTGCGCATCAGCCACGAAC AAAACGTCATTCTGCCGCATGTGCATAAATCCGACCTGCCCGCGCTGCATGCACGGCTAAAAGAGGCGCAGTTGGCCACG GCGAACATCGGGCTGATTTCGGACATCATCGCCTGCCCCGGGATGGATTACTGCGCGCTGGCCACGGCCCGTTCGATCCC CATAGCGCAAGAGATCGCGACCCGGTTTGACGACCTCAAGCTTGAGCATGACATTGGGCCGCTCAAGATCAAGATATCGG GCTGCATCAATGCCTGCGGTCATCACCACGTCGGCCACATCGGCATTCTGGGCCTTGATCGCGCAGGGGTCGAAAACTAT CAGATCACGCTGGGGGGCGACGGATCAGAGGACGCGACCATCGGTGAGCGGGCGGGTCCGGGTTTTTCTGCCGACGAAAT CATCCCAGCGGTGGAACGGATCGTGATGGCCTATCTTGAATTGCGCGACGCACCCGAAGAAACGTTCCTCGAAACCTATC GCCGCATCGGTCTGGCCCCCTTCAAGGCGGCCCTTTATCCGGAGGTGCAGGCCGATGCCGCTTGA
Upstream 100 bases:
>100_bases GACACCGCCGGTGGCGTGCCAAAACCCACCCATTTTCGCGAAGACTTCCGCGCGCGCGGCCCGTCCAACTACGCCCATGG CAAACAAGAGGACCTGAGCA
Downstream 100 bases:
>100_bases TGAGGCGCAGCCTGTGGACCAGAGCGGCAGGCGCACAGATGAGTTGCAGGCGCTGGTGCAGGAGCTGAACACGCGCCTGC GCCATCATGGGGCGGTGGAT
Product: sulfite reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 554; Mature: 554
Protein sequence:
>554_residues MYKYTDFDAAFIKERNAQFRSQVERRIDGSLTEDEFKPLRLMNGLYLQLHAYMLRVAIPYGTLNGRQMDKLADIADRWDK GYGHFTTRQNIQFNWPELRDIPDMLDALAEVQMHAIQTSGNTIRNVTADHFAGAAADEIADPRPVAELIRQWSTDHPEFQ FLPRKFKVAVTGSPNDRAVTKAHDIGLRMLERDGVAGFEVIVGGGLGRTPMIGKVLRDFLPREDLLPYLEAIVSVYNLLG RRDNKYKARIKITVHENGIDDFRARVEERFALIRPQFGGIDQQLLAGIEADFAAPDFKTKPVADFEAAYTNDPVFRSWAD TNLTDHRAPGYAIVSISLKAHAATPGDATSAQMRVMADLARDYGHDELRISHEQNVILPHVHKSDLPALHARLKEAQLAT ANIGLISDIIACPGMDYCALATARSIPIAQEIATRFDDLKLEHDIGPLKIKISGCINACGHHHVGHIGILGLDRAGVENY QITLGGDGSEDATIGERAGPGFSADEIIPAVERIVMAYLELRDAPEETFLETYRRIGLAPFKAALYPEVQADAA
Sequences:
>Translated_554_residues MYKYTDFDAAFIKERNAQFRSQVERRIDGSLTEDEFKPLRLMNGLYLQLHAYMLRVAIPYGTLNGRQMDKLADIADRWDK GYGHFTTRQNIQFNWPELRDIPDMLDALAEVQMHAIQTSGNTIRNVTADHFAGAAADEIADPRPVAELIRQWSTDHPEFQ FLPRKFKVAVTGSPNDRAVTKAHDIGLRMLERDGVAGFEVIVGGGLGRTPMIGKVLRDFLPREDLLPYLEAIVSVYNLLG RRDNKYKARIKITVHENGIDDFRARVEERFALIRPQFGGIDQQLLAGIEADFAAPDFKTKPVADFEAAYTNDPVFRSWAD TNLTDHRAPGYAIVSISLKAHAATPGDATSAQMRVMADLARDYGHDELRISHEQNVILPHVHKSDLPALHARLKEAQLAT ANIGLISDIIACPGMDYCALATARSIPIAQEIATRFDDLKLEHDIGPLKIKISGCINACGHHHVGHIGILGLDRAGVENY QITLGGDGSEDATIGERAGPGFSADEIIPAVERIVMAYLELRDAPEETFLETYRRIGLAPFKAALYPEVQADAA >Mature_554_residues MYKYTDFDAAFIKERNAQFRSQVERRIDGSLTEDEFKPLRLMNGLYLQLHAYMLRVAIPYGTLNGRQMDKLADIADRWDK GYGHFTTRQNIQFNWPELRDIPDMLDALAEVQMHAIQTSGNTIRNVTADHFAGAAADEIADPRPVAELIRQWSTDHPEFQ FLPRKFKVAVTGSPNDRAVTKAHDIGLRMLERDGVAGFEVIVGGGLGRTPMIGKVLRDFLPREDLLPYLEAIVSVYNLLG RRDNKYKARIKITVHENGIDDFRARVEERFALIRPQFGGIDQQLLAGIEADFAAPDFKTKPVADFEAAYTNDPVFRSWAD TNLTDHRAPGYAIVSISLKAHAATPGDATSAQMRVMADLARDYGHDELRISHEQNVILPHVHKSDLPALHARLKEAQLAT ANIGLISDIIACPGMDYCALATARSIPIAQEIATRFDDLKLEHDIGPLKIKISGCINACGHHHVGHIGILGLDRAGVENY QITLGGDGSEDATIGERAGPGFSADEIIPAVERIVMAYLELRDAPEETFLETYRRIGLAPFKAALYPEVQADAA
Specific function: This Enzyme Catalyzes The 6-Electron Reduction Of Sulfite To Sulfide. This Is One Of Several Activities Required For The Biosynthesis Of L-Cysteine From Sulfate. [C]
COG id: COG0155
COG function: function code P; Sulfite reductase, beta subunit (hemoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family [H]
Homologues:
Organism=Escherichia coli, GI1789122, Length=513, Percent_Identity=23.7816764132554, Blast_Score=99, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6322597, Length=583, Percent_Identity=22.4699828473413, Blast_Score=98, Evalue=4e-21,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005117 - InterPro: IPR006067 - InterPro: IPR006066 [H]
Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr [H]
EC number: =1.7.7.1 [H]
Molecular weight: Translated: 61557; Mature: 61557
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKYTDFDAAFIKERNAQFRSQVERRIDGSLTEDEFKPLRLMNGLYLQLHAYMLRVAIPY CCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC GTLNGRQMDKLADIADRWDKGYGHFTTRQNIQFNWPELRDIPDMLDALAEVQMHAIQTSG CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCCHHCCHHHHHHHHHHHHHHHHHCCC NTIRNVTADHFAGAAADEIADPRPVAELIRQWSTDHPEFQFLPRKFKVAVTGSPNDRAVT CEEECCCHHHHCCCCHHHCCCCCHHHHHHHHHCCCCCCEEECCCEEEEEEECCCCCCCCH KAHDIGLRMLERDGVAGFEVIVGGGLGRTPMIGKVLRDFLPREDLLPYLEAIVSVYNLLG HHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC RRDNKYKARIKITVHENGIDDFRARVEERFALIRPQFGGIDQQLLAGIEADFAAPDFKTK CCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCC PVADFEAAYTNDPVFRSWADTNLTDHRAPGYAIVSISLKAHAATPGDATSAQMRVMADLA CCCCCHHHCCCCCCEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHH RDYGHDELRISHEQNVILPHVHKSDLPALHARLKEAQLATANIGLISDIIACPGMDYCAL HHCCCCCEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHH ATARSIPIAQEIATRFDDLKLEHDIGPLKIKISGCINACGHHHVGHIGILGLDRAGVENY HHHCCCCHHHHHHHHHHCCEEECCCCCEEEEEHHHHHHCCCCCCCEEEEEECCCCCCCCE QITLGGDGSEDATIGERAGPGFSADEIIPAVERIVMAYLELRDAPEETFLETYRRIGLAP EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCH FKAALYPEVQADAA HHHHHCCCCCCCCC >Mature Secondary Structure MYKYTDFDAAFIKERNAQFRSQVERRIDGSLTEDEFKPLRLMNGLYLQLHAYMLRVAIPY CCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC GTLNGRQMDKLADIADRWDKGYGHFTTRQNIQFNWPELRDIPDMLDALAEVQMHAIQTSG CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCCHHCCHHHHHHHHHHHHHHHHHCCC NTIRNVTADHFAGAAADEIADPRPVAELIRQWSTDHPEFQFLPRKFKVAVTGSPNDRAVT CEEECCCHHHHCCCCHHHCCCCCHHHHHHHHHCCCCCCEEECCCEEEEEEECCCCCCCCH KAHDIGLRMLERDGVAGFEVIVGGGLGRTPMIGKVLRDFLPREDLLPYLEAIVSVYNLLG HHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC RRDNKYKARIKITVHENGIDDFRARVEERFALIRPQFGGIDQQLLAGIEADFAAPDFKTK CCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCC PVADFEAAYTNDPVFRSWADTNLTDHRAPGYAIVSISLKAHAATPGDATSAQMRVMADLA CCCCCHHHCCCCCCEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHH RDYGHDELRISHEQNVILPHVHKSDLPALHARLKEAQLATANIGLISDIIACPGMDYCAL HHCCCCCEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHH ATARSIPIAQEIATRFDDLKLEHDIGPLKIKISGCINACGHHHVGHIGILGLDRAGVENY HHHCCCCHHHHHHHHHHCCEEECCCCCEEEEEHHHHHHCCCCCCCEEEEEECCCCCCCCE QITLGGDGSEDATIGERAGPGFSADEIIPAVERIVMAYLELRDAPEETFLETYRRIGLAP EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCH FKAALYPEVQADAA HHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8490140 [H]