Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110680164

Identifier: 110680164

GI number: 110680164

Start: 2842857

End: 2843162

Strand: Direct

Name: 110680164

Synonym: RD1_2965

Alternate gene names: NA

Gene position: 2842857-2843162 (Clockwise)

Preceding gene: 110680163

Following gene: 110680165

Centisome position: 68.78

GC content: 59.48

Gene sequence:

>306_bases
ATGCCCAAAGCATTCACGCCCAAAGTCGTCACCGCAAACCATTTGCTCAAAGGTGACGTCATTTATCAGACCGCCACTGG
ATGGACCCGCGATCTGGCCGAGGCTGAGGTATTGACCGATGAGGCGGACGCGGACCTGCGCCTGATTGATGCCGCACAGC
AGGTTTCCTTGGTGGTCGGCGCGTATCTCGCGGACGTCGACACCGCCGGTGGCGTGCCAAAACCCACCCATTTTCGCGAA
GACTTCCGCGCGCGCGGCCCGTCCAACTACGCCCATGGCAAACAAGAGGACCTGAGCAATGTATAA

Upstream 100 bases:

>100_bases
TTTACGGATTACCCAAACGCAAAGCAGCACGCGCCGCTGCGGACCTCGCGCCCGCGCTCAACACGGCCACGCGCCCCACA
CATGCACAGGAGGCTTTCTG

Downstream 100 bases:

>100_bases
GTACACCGATTTCGACGCGGCTTTCATCAAGGAGCGCAACGCCCAGTTCCGCAGCCAGGTCGAGCGGCGCATTGACGGCT
CGCTTACCGAAGATGAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MPKAFTPKVVTANHLLKGDVIYQTATGWTRDLAEAEVLTDEADADLRLIDAAQQVSLVVGAYLADVDTAGGVPKPTHFRE
DFRARGPSNYAHGKQEDLSNV

Sequences:

>Translated_101_residues
MPKAFTPKVVTANHLLKGDVIYQTATGWTRDLAEAEVLTDEADADLRLIDAAQQVSLVVGAYLADVDTAGGVPKPTHFRE
DFRARGPSNYAHGKQEDLSNV
>Mature_100_residues
PKAFTPKVVTANHLLKGDVIYQTATGWTRDLAEAEVLTDEADADLRLIDAAQQVSLVVGAYLADVDTAGGVPKPTHFRED
FRARGPSNYAHGKQEDLSNV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10937; Mature: 10806

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKAFTPKVVTANHLLKGDVIYQTATGWTRDLAEAEVLTDEADADLRLIDAAQQVSLVVG
CCCCCCCCEECCCCEECCCEEEECCCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHH
AYLADVDTAGGVPKPTHFREDFRARGPSNYAHGKQEDLSNV
HHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PKAFTPKVVTANHLLKGDVIYQTATGWTRDLAEAEVLTDEADADLRLIDAAQQVSLVVG
CCCCCCCEECCCCEECCCEEEECCCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHH
AYLADVDTAGGVPKPTHFREDFRARGPSNYAHGKQEDLSNV
HHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA