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The map label for this gene is qmcA [H]

Identifier: 110680154

GI number: 110680154

Start: 2834486

End: 2835382

Strand: Direct

Name: qmcA [H]

Synonym: RD1_2954

Alternate gene names: 110680154

Gene position: 2834486-2835382 (Clockwise)

Preceding gene: 110680153

Following gene: 110680155

Centisome position: 68.58

GC content: 56.52

Gene sequence:

>897_bases
ATGGATATCGAAACCCTGATCGTTGATCTTCTATCCGGCAATATTGTCTTGCTTTTGCTGGCAGCACTTCTGATCACGGT
TGTGTTCAAGGGCGTCAAGATCGTTCCGCAGTCCGAACAATATGTGGTCGAGCGGTTTGGCAGGCTGCGGGCCGTGCTCG
GGCCGGGTATCAACCTGATCGTCCCTTTCATCGACCGGGTTGCGCATGAGATTTCCATTCTTGAACGGCAATTACCCAAT
GCCAGCCAGGATGCGATTACCAAGGATAACGTGCTTTTGCAGGTGGAAACCTCTGTCTTTTATCGCATTACCGAACCTGA
ACGCACGGTCTACCGCATCCGGGATGTGGACGGCGCAATCGCGACAACCGTGGCCGGTATTGTCCGCGCAGAGATTGGCA
AGATGGATCTCGATGACGTGCAGGCCAATCGCGCCCAGCTGATCACCACGATCAAGGCACTTGTGGAGGATTCCGTGAAC
GACTGGGGCATTCAGGTCACCCGCGCTGAAATCCTTGATGTGAACCTCGATCAGGCAACCCGGGACGCGATGCTGCAACA
GCTGAACGCCGAACGGGCACGACGCGCACAGGTCACCGAGGCCGAAGGTTCAAAACGCGCCGTTGAATTGGCCGCAGATG
CCGAACTCTACGCATCTGAACAAACCGCAAAAGCGCGCAGAATCCTCGCGGATGCCGAAGCCTATGCAACGCAGGTCGTG
GCGGATGCGATCAACGAAAATGGACTTGAAGCGGCGCAATATCAGATCGCGTTGAAACAGGTGGAATCCCTGACCGCGCT
GGGGTCAGGCTCCGGAAAGCAGACCATAGTGGTGCCTGCGCAGGCGATTGAAGCCTTTGGAGATGCGTTCAAACTGCTCA
AGGGGCGCGGCGCGTGA

Upstream 100 bases:

>100_bases
TTCGGAATAATCAGCAGCGGCGTTAAAAAATATTTCAATTCTTGCATTTAACTCCGGCGATGCGCACATCTGAGGAGCGT
TTTAAAAAAGGACAGCCGGC

Downstream 100 bases:

>100_bases
TCGGTGCCTTGGGTATGTGGTGGGTCTGGCTGGCTGCGGCCTTGGTCTTGGGTCTGGCTGAAGTGCTACTGCCCGGGTTC
ATCTTCCTCGGCTTTGCCAT

Product: SPFH domain-containing protein/band 7 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MDIETLIVDLLSGNIVLLLLAALLITVVFKGVKIVPQSEQYVVERFGRLRAVLGPGINLIVPFIDRVAHEISILERQLPN
ASQDAITKDNVLLQVETSVFYRITEPERTVYRIRDVDGAIATTVAGIVRAEIGKMDLDDVQANRAQLITTIKALVEDSVN
DWGIQVTRAEILDVNLDQATRDAMLQQLNAERARRAQVTEAEGSKRAVELAADAELYASEQTAKARRILADAEAYATQVV
ADAINENGLEAAQYQIALKQVESLTALGSGSGKQTIVVPAQAIEAFGDAFKLLKGRGA

Sequences:

>Translated_298_residues
MDIETLIVDLLSGNIVLLLLAALLITVVFKGVKIVPQSEQYVVERFGRLRAVLGPGINLIVPFIDRVAHEISILERQLPN
ASQDAITKDNVLLQVETSVFYRITEPERTVYRIRDVDGAIATTVAGIVRAEIGKMDLDDVQANRAQLITTIKALVEDSVN
DWGIQVTRAEILDVNLDQATRDAMLQQLNAERARRAQVTEAEGSKRAVELAADAELYASEQTAKARRILADAEAYATQVV
ADAINENGLEAAQYQIALKQVESLTALGSGSGKQTIVVPAQAIEAFGDAFKLLKGRGA
>Mature_298_residues
MDIETLIVDLLSGNIVLLLLAALLITVVFKGVKIVPQSEQYVVERFGRLRAVLGPGINLIVPFIDRVAHEISILERQLPN
ASQDAITKDNVLLQVETSVFYRITEPERTVYRIRDVDGAIATTVAGIVRAEIGKMDLDDVQANRAQLITTIKALVEDSVN
DWGIQVTRAEILDVNLDQATRDAMLQQLNAERARRAQVTEAEGSKRAVELAADAELYASEQTAKARRILADAEAYATQVV
ADAINENGLEAAQYQIALKQVESLTALGSGSGKQTIVVPAQAIEAFGDAFKLLKGRGA

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=283, Percent_Identity=31.8021201413428, Blast_Score=125, Evalue=6e-29,
Organism=Homo sapiens, GI221316744, Length=225, Percent_Identity=30.6666666666667, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI21686995, Length=225, Percent_Identity=30.6666666666667, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI20149563, Length=232, Percent_Identity=25.8620689655172, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI38016911, Length=216, Percent_Identity=27.3148148148148, Blast_Score=73, Evalue=3e-13,
Organism=Escherichia coli, GI1786697, Length=285, Percent_Identity=35.0877192982456, Blast_Score=171, Evalue=5e-44,
Organism=Escherichia coli, GI1790616, Length=223, Percent_Identity=27.8026905829596, Blast_Score=69, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI32564147, Length=268, Percent_Identity=30.5970149253731, Blast_Score=114, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17569497, Length=204, Percent_Identity=30.3921568627451, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17569493, Length=181, Percent_Identity=28.7292817679558, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI193209764, Length=181, Percent_Identity=28.7292817679558, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI32566490, Length=208, Percent_Identity=26.9230769230769, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17570161, Length=285, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193210507, Length=285, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17569499, Length=211, Percent_Identity=27.4881516587678, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71987621, Length=223, Percent_Identity=28.6995515695067, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71987612, Length=223, Percent_Identity=28.6995515695067, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17570459, Length=205, Percent_Identity=28.2926829268293, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI25153583, Length=223, Percent_Identity=28.6995515695067, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI71989948, Length=256, Percent_Identity=24.21875, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71989955, Length=186, Percent_Identity=25.8064516129032, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI45550506, Length=208, Percent_Identity=34.6153846153846, Blast_Score=125, Evalue=4e-29,
Organism=Drosophila melanogaster, GI45556022, Length=237, Percent_Identity=27.4261603375527, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI18860517, Length=195, Percent_Identity=29.2307692307692, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21356845, Length=198, Percent_Identity=27.7777777777778, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28573263, Length=194, Percent_Identity=27.319587628866, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI62484448, Length=202, Percent_Identity=29.2079207920792, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281361631, Length=202, Percent_Identity=28.7128712871287, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24657857, Length=202, Percent_Identity=29.2079207920792, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI62484274, Length=202, Percent_Identity=29.2079207920792, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281361633, Length=202, Percent_Identity=28.7128712871287, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281365664, Length=202, Percent_Identity=29.2079207920792, Blast_Score=76, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 32373; Mature: 32373

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIETLIVDLLSGNIVLLLLAALLITVVFKGVKIVPQSEQYVVERFGRLRAVLGPGINLI
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCHHHH
VPFIDRVAHEISILERQLPNASQDAITKDNVLLQVETSVFYRITEPERTVYRIRDVDGAI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCHHEEEECCCCHHH
ATTVAGIVRAEIGKMDLDDVQANRAQLITTIKALVEDSVNDWGIQVTRAEILDVNLDQAT
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHEEECCCCHHH
RDAMLQQLNAERARRAQVTEAEGSKRAVELAADAELYASEQTAKARRILADAEAYATQVV
HHHHHHHHHHHHHHHHHCHHCCCCCHHEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADAINENGLEAAQYQIALKQVESLTALGSGSGKQTIVVPAQAIEAFGDAFKLLKGRGA
HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDIETLIVDLLSGNIVLLLLAALLITVVFKGVKIVPQSEQYVVERFGRLRAVLGPGINLI
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCHHHH
VPFIDRVAHEISILERQLPNASQDAITKDNVLLQVETSVFYRITEPERTVYRIRDVDGAI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCHHEEEECCCCHHH
ATTVAGIVRAEIGKMDLDDVQANRAQLITTIKALVEDSVNDWGIQVTRAEILDVNLDQAT
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHEEECCCCHHH
RDAMLQQLNAERARRAQVTEAEGSKRAVELAADAELYASEQTAKARRILADAEAYATQVV
HHHHHHHHHHHHHHHHHCHHCCCCCHHEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADAINENGLEAAQYQIALKQVESLTALGSGSGKQTIVVPAQAIEAFGDAFKLLKGRGA
HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]