Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110680155

Identifier: 110680155

GI number: 110680155

Start: 2835397

End: 2835654

Strand: Direct

Name: 110680155

Synonym: RD1_2955

Alternate gene names: NA

Gene position: 2835397-2835654 (Clockwise)

Preceding gene: 110680154

Following gene: 110680156

Centisome position: 68.6

GC content: 59.69

Gene sequence:

>258_bases
ATGTGGTGGGTCTGGCTGGCTGCGGCCTTGGTCTTGGGTCTGGCTGAAGTGCTACTGCCCGGGTTCATCTTCCTCGGCTT
TGCCATCGCGGCCGTGTTCATGTCTGCTCTGGTTCTGATTGCACCCGAGCTTGGGGCGCCCGCTGTGCTTGCGGTCTATG
CGGGCAGCGCATTGCTCTGCTGGATTGGCCTGCGCGTGGTGTTCAAAAAACAATCCAGCGGGGCGCGCATCGTCACCAGG
GATATCAACGACAATTAA

Upstream 100 bases:

>100_bases
CCGGAAAGCAGACCATAGTGGTGCCTGCGCAGGCGATTGAAGCCTTTGGAGATGCGTTCAAACTGCTCAAGGGGCGCGGC
GCGTGATCGGTGCCTTGGGT

Downstream 100 bases:

>100_bases
TCTCAGCGCCTTTCGGTTGAGGTCAGGGCAACCACCTGCTACCCAAAGGGTCATTTTTGCGGTTTGGGGGACTGGCGATG
GAAAAGCTCACGTTCGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MWWVWLAAALVLGLAEVLLPGFIFLGFAIAAVFMSALVLIAPELGAPAVLAVYAGSALLCWIGLRVVFKKQSSGARIVTR
DINDN

Sequences:

>Translated_85_residues
MWWVWLAAALVLGLAEVLLPGFIFLGFAIAAVFMSALVLIAPELGAPAVLAVYAGSALLCWIGLRVVFKKQSSGARIVTR
DINDN
>Mature_85_residues
MWWVWLAAALVLGLAEVLLPGFIFLGFAIAAVFMSALVLIAPELGAPAVLAVYAGSALLCWIGLRVVFKKQSSGARIVTR
DINDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9058; Mature: 9058

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWWVWLAAALVLGLAEVLLPGFIFLGFAIAAVFMSALVLIAPELGAPAVLAVYAGSALLC
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHH
WIGLRVVFKKQSSGARIVTRDINDN
HHHHHHHHHCCCCCCEEEEECCCCC
>Mature Secondary Structure
MWWVWLAAALVLGLAEVLLPGFIFLGFAIAAVFMSALVLIAPELGAPAVLAVYAGSALLC
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHH
WIGLRVVFKKQSSGARIVTRDINDN
HHHHHHHHHCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA