Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is yflP [H]

Identifier: 110680146

GI number: 110680146

Start: 2824799

End: 2825785

Strand: Direct

Name: yflP [H]

Synonym: RD1_2946

Alternate gene names: 110680146

Gene position: 2824799-2825785 (Clockwise)

Preceding gene: 110680142

Following gene: 110680147

Centisome position: 68.35

GC content: 61.5

Gene sequence:

>987_bases
ATGAGTACATTGAAACTGGGCCGTCGGGCCCTGATTGGCGCGGCTGTGGCCGCAATGAGCCTTGGCGCACCAGCCTTTTC
GGATGGTCATCAGGCGGTTGAGAGCATCCACTTCCTGATCCCGGGCGGTGCCGGCGGAGGCTGGGATGGCACGGCGCGCG
GCACGGGCGAAGCGCTCACCGCCGCAGGTCTGGTCGGCACAGCCTCATACGAAAACATGTCAGGCGGCGGCGGCGGCAAG
GCCATTGGCTATCTGATCGAGAACGCAGACAGCAATCACGGCACCCTGATGGTGAATTCCACACCCATCGTGATCCGGTC
CCTGACAGGAGTGTTTCCGCACAACTTCCGGGATCTGACGCTGGTGGCGGGCACCATCGGTGACTATGCCGCCATCGTGG
TGGGCAAGGACAGCCCCGTCAACAACATGGCCGACCTGCTGGCAGCCTATGACGCGGACCCGAATGGCACAGCCATCGGT
GGCGGGTCGGTGCCGGGCGGCATGGACCACCTCGTGGCGGCCATGGTCATGGAAGCCGCGGGCAAGGATGCGCTTGGCGT
AAAATACATCCCCTATGACGCGGGTGGCAAAGCGATGGCGGCCCTGCTGTCAGGTGAGATCGCCGCTCTGTCGACCGGGT
TTTCCGAGGCCGTCGACTTGGCTGAAGCCGGCGAAGTCAAGATCATTGGCGTGACATCAGACGAGCGCGTCAGTGCCGCA
CCCGATGCCATGACGATGAAGGAACAGGGTATCGACACAACCTTCATCAACTGGCGTGGTTTCTTTGGTGCGCCGGGCCT
GCCCGCAGAGAAAGTCGCCGCCTATCAGGATGCGATCGCCAAGATGTACGACACGCCCGAGTGGGAAGAAGTGCGCGCCC
GCAACGGATGGGTCAACATTCACAACCCCGGCGATGACTTCAAAGCCTTCCTTGAAGAGCAAGAGAAAGTCATCGGGGAC
CTGATGAAAAAACTGGGCTTTTTGTAA

Upstream 100 bases:

>100_bases
TTCGCATGAAGCGGCCGCGTGACAGGTCCATGTCAGGTTGCCATGTTTGAGTGCAATCAACTGAGCCGGAACAGCTACAG
TTGTCAAATGGGAGGAACAC

Downstream 100 bases:

>100_bases
AGCCCGGTTGACCGGGGCGCGCAGCTGATCGCGCCCCGGTCGTTTTACGCTTTGACTGCTCTGGGGGGTACTATGGCGCT
GGATCGCTGGATCGGACTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MSTLKLGRRALIGAAVAAMSLGAPAFSDGHQAVESIHFLIPGGAGGGWDGTARGTGEALTAAGLVGTASYENMSGGGGGK
AIGYLIENADSNHGTLMVNSTPIVIRSLTGVFPHNFRDLTLVAGTIGDYAAIVVGKDSPVNNMADLLAAYDADPNGTAIG
GGSVPGGMDHLVAAMVMEAAGKDALGVKYIPYDAGGKAMAALLSGEIAALSTGFSEAVDLAEAGEVKIIGVTSDERVSAA
PDAMTMKEQGIDTTFINWRGFFGAPGLPAEKVAAYQDAIAKMYDTPEWEEVRARNGWVNIHNPGDDFKAFLEEQEKVIGD
LMKKLGFL

Sequences:

>Translated_328_residues
MSTLKLGRRALIGAAVAAMSLGAPAFSDGHQAVESIHFLIPGGAGGGWDGTARGTGEALTAAGLVGTASYENMSGGGGGK
AIGYLIENADSNHGTLMVNSTPIVIRSLTGVFPHNFRDLTLVAGTIGDYAAIVVGKDSPVNNMADLLAAYDADPNGTAIG
GGSVPGGMDHLVAAMVMEAAGKDALGVKYIPYDAGGKAMAALLSGEIAALSTGFSEAVDLAEAGEVKIIGVTSDERVSAA
PDAMTMKEQGIDTTFINWRGFFGAPGLPAEKVAAYQDAIAKMYDTPEWEEVRARNGWVNIHNPGDDFKAFLEEQEKVIGD
LMKKLGFL
>Mature_327_residues
STLKLGRRALIGAAVAAMSLGAPAFSDGHQAVESIHFLIPGGAGGGWDGTARGTGEALTAAGLVGTASYENMSGGGGGKA
IGYLIENADSNHGTLMVNSTPIVIRSLTGVFPHNFRDLTLVAGTIGDYAAIVVGKDSPVNNMADLLAAYDADPNGTAIGG
GSVPGGMDHLVAAMVMEAAGKDALGVKYIPYDAGGKAMAALLSGEIAALSTGFSEAVDLAEAGEVKIIGVTSDERVSAAP
DAMTMKEQGIDTTFINWRGFFGAPGLPAEKVAAYQDAIAKMYDTPEWEEVRARNGWVNIHNPGDDFKAFLEEQEKVIGDL
MKKLGFL

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 33738; Mature: 33606

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLKLGRRALIGAAVAAMSLGAPAFSDGHQAVESIHFLIPGGAGGGWDGTARGTGEALT
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEEECCCCCCCCCCCCCCCCHHH
AAGLVGTASYENMSGGGGGKAIGYLIENADSNHGTLMVNSTPIVIRSLTGVFPHNFRDLT
HHHHEECCCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCEEEEHHHCCCCCCCCEEE
LVAGTIGDYAAIVVGKDSPVNNMADLLAAYDADPNGTAIGGGSVPGGMDHLVAAMVMEAA
EEEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHC
GKDALGVKYIPYDAGGKAMAALLSGEIAALSTGFSEAVDLAEAGEVKIIGVTSDERVSAA
CCCCCCEEEEEECCCHHHHHHHHHCCHHHHHCCHHHHHHHHCCCCEEEEEECCCCCCCCC
PDAMTMKEQGIDTTFINWRGFFGAPGLPAEKVAAYQDAIAKMYDTPEWEEVRARNGWVNI
CCHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEE
HNPGDDFKAFLEEQEKVIGDLMKKLGFL
CCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STLKLGRRALIGAAVAAMSLGAPAFSDGHQAVESIHFLIPGGAGGGWDGTARGTGEALT
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEEECCCCCCCCCCCCCCCCHHH
AAGLVGTASYENMSGGGGGKAIGYLIENADSNHGTLMVNSTPIVIRSLTGVFPHNFRDLT
HHHHEECCCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCEEEEHHHCCCCCCCCEEE
LVAGTIGDYAAIVVGKDSPVNNMADLLAAYDADPNGTAIGGGSVPGGMDHLVAAMVMEAA
EEEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHC
GKDALGVKYIPYDAGGKAMAALLSGEIAALSTGFSEAVDLAEAGEVKIIGVTSDERVSAA
CCCCCCEEEEEECCCHHHHHHHHHCCHHHHHCCHHHHHHHHCCCCEEEEEECCCCCCCCC
PDAMTMKEQGIDTTFINWRGFFGAPGLPAEKVAAYQDAIAKMYDTPEWEEVRARNGWVNI
CCHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEE
HNPGDDFKAFLEEQEKVIGDLMKKLGFL
CCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]