Click here to switch to the map view.

The map label for this gene is ugpE [H]

Identifier: 110680138

GI number: 110680138

Start: 2816595

End: 2817440

Strand: Reverse

Name: ugpE [H]

Synonym: RD1_2937

Alternate gene names: 110680138

Gene position: 2817440-2816595 (Counterclockwise)

Preceding gene: 110680139

Following gene: 110680137

Centisome position: 68.17

GC content: 57.09

Gene sequence:

>846_bases
ATGGACCGTACACCGATTTCCACCCACATCATCCTGATCATCGGTGCGCTTTTCATGACGCTGCCGGTCTGGGTCGCCTT
TGCGACCTCGACCCATGCGCCCGAAACGATCCTGCGCGAGGGGCTGCAATTCTGGCCCGGGCCCCATCTGGTCGAGACCT
ACAACGAAGTGCTCTTTGTCGAAGGCGGCGTGATGAAACAGGTCACCGCCACGACAATGCTGCAAAACTCGATGATCCTG
GGTATCGGCTTTGCCATCGGCAAGGTCATCATTTCGATGCTGGCAGCCTATGCGATCGTCTATTTCCGGTTTCGCCTCGG
TGTGCCGCTGTTCTGGGTCATCTTCATGACGCTGCTGTTGCCGCTGGAGGTGCGGATCATCCCGTCCTATGAGGTCGTCG
CGAATATGGGGCTGTTGGACACGCAGACGGGGCTGATCCTGCCGCTGATCGCCTCGGCGACGGGGACGTTCTTCTTCCGT
CAGTTCTTCCGGTCTGTCCCGGATGAATTACTGGAGGCTGCGCGGCTGGATGGCGCCACGGCCTGGGGGTTCTTCAAGGA
CATTCTCGTCCCGCTCAGCCGCACGATGATCGCGGCGATCCTAATCATCATGTTCGTGGTGGGGTGGAACCAGTACCTCT
GGCCGCTGATCATGACAACGAAAGAGGAAAACTACACGCTGGTGATCGGCATCAAGCAGATTTATCAGGTCCTCAATGAG
GGGGGGGAGTTGCCTCAATTCCAAAAAGCATTTGCACTGACCATTCTGGCGACACTGCCACCGGTGTTGGTTGTGCTGAT
TTTCCAAAGATGGTTCGTGAAGGGCCTCGTCGAGAGTGAGAAATAA

Upstream 100 bases:

>100_bases
ATATTGGCGGGTCATCCGCGCAATCTGTTGTTTTGATGATCATGGTTCTGGCGCTCACCGTGGTGCAGTTCCGATATATC
GAGCGAAAGGTGCATTACTG

Downstream 100 bases:

>100_bases
TGGCTCAGGTTGAACTGAAACAAGTCCGCAAAACCTATCCCAATGGTGCCGAGGCGATCTTTGGCGTCGATATGAAAATT
GACGATGGCGAATTGATCGT

Product: glycerol-3-phosphate ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MDRTPISTHIILIIGALFMTLPVWVAFATSTHAPETILREGLQFWPGPHLVETYNEVLFVEGGVMKQVTATTMLQNSMIL
GIGFAIGKVIISMLAAYAIVYFRFRLGVPLFWVIFMTLLLPLEVRIIPSYEVVANMGLLDTQTGLILPLIASATGTFFFR
QFFRSVPDELLEAARLDGATAWGFFKDILVPLSRTMIAAILIIMFVVGWNQYLWPLIMTTKEENYTLVIGIKQIYQVLNE
GGELPQFQKAFALTILATLPPVLVVLIFQRWFVKGLVESEK

Sequences:

>Translated_281_residues
MDRTPISTHIILIIGALFMTLPVWVAFATSTHAPETILREGLQFWPGPHLVETYNEVLFVEGGVMKQVTATTMLQNSMIL
GIGFAIGKVIISMLAAYAIVYFRFRLGVPLFWVIFMTLLLPLEVRIIPSYEVVANMGLLDTQTGLILPLIASATGTFFFR
QFFRSVPDELLEAARLDGATAWGFFKDILVPLSRTMIAAILIIMFVVGWNQYLWPLIMTTKEENYTLVIGIKQIYQVLNE
GGELPQFQKAFALTILATLPPVLVVLIFQRWFVKGLVESEK
>Mature_281_residues
MDRTPISTHIILIIGALFMTLPVWVAFATSTHAPETILREGLQFWPGPHLVETYNEVLFVEGGVMKQVTATTMLQNSMIL
GIGFAIGKVIISMLAAYAIVYFRFRLGVPLFWVIFMTLLLPLEVRIIPSYEVVANMGLLDTQTGLILPLIASATGTFFFR
QFFRSVPDELLEAARLDGATAWGFFKDILVPLSRTMIAAILIIMFVVGWNQYLWPLIMTTKEENYTLVIGIKQIYQVLNE
GGELPQFQKAFALTILATLPPVLVVLIFQRWFVKGLVESEK

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=276, Percent_Identity=44.9275362318841, Blast_Score=236, Evalue=1e-63,
Organism=Escherichia coli, GI1787571, Length=238, Percent_Identity=23.109243697479, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1790464, Length=210, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31591; Mature: 31591

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRTPISTHIILIIGALFMTLPVWVAFATSTHAPETILREGLQFWPGPHLVETYNEVLFV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHEEEE
EGGVMKQVTATTMLQNSMILGIGFAIGKVIISMLAAYAIVYFRFRLGVPLFWVIFMTLLL
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
PLEVRIIPSYEVVANMGLLDTQTGLILPLIASATGTFFFRQFFRSVPDELLEAARLDGAT
CHHEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AWGFFKDILVPLSRTMIAAILIIMFVVGWNQYLWPLIMTTKEENYTLVIGIKQIYQVLNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCCCEEEEEEHHHHHHHHHC
GGELPQFQKAFALTILATLPPVLVVLIFQRWFVKGLVESEK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDRTPISTHIILIIGALFMTLPVWVAFATSTHAPETILREGLQFWPGPHLVETYNEVLFV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHEEEE
EGGVMKQVTATTMLQNSMILGIGFAIGKVIISMLAAYAIVYFRFRLGVPLFWVIFMTLLL
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
PLEVRIIPSYEVVANMGLLDTQTGLILPLIASATGTFFFRQFFRSVPDELLEAARLDGAT
CHHEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AWGFFKDILVPLSRTMIAAILIIMFVVGWNQYLWPLIMTTKEENYTLVIGIKQIYQVLNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCCCEEEEEEHHHHHHHHHC
GGELPQFQKAFALTILATLPPVLVVLIFQRWFVKGLVESEK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]