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The map label for this gene is ugpA [H]

Identifier: 110680139

GI number: 110680139

Start: 2817440

End: 2818318

Strand: Reverse

Name: ugpA [H]

Synonym: RD1_2938

Alternate gene names: 110680139

Gene position: 2818318-2817440 (Counterclockwise)

Preceding gene: 110680140

Following gene: 110680138

Centisome position: 68.19

GC content: 53.7

Gene sequence:

>879_bases
ATGAAGCGCGTTCAATTTGAGCACAGCGCCATTCCATATCTGTTTATTGCGCCGCAGATCATTATCATCAGCATCTTCTT
TCTCTGGCCGTCCGCACAGGCGATTTACCAGTCGTTTCTGCTTGAGGACGCTTTCGGGCTGTCTTCGCAATTTGTCTGGT
TCAAGAACTACAGCGACACGATCCTGAATGCCTCATGGCTACAGGCGGCGGGTTTCACGCTCGTTTTCTCGTCACTGGTG
ACGTTTCTGTCCCTTGCGCTGGCCTTGTTGCTGGCGGTCAAGGCAAACGAAGTGATCCATGGCGCAAGCACCTACAAAAC
GATGCTGATGTGGGCCTATGCCATTGCGCCCCCTGTCGCGGGGCTGATGGGCAACCTGATGTTCAACCCGATCATCGGGG
ATCTTTACAGCTTCATGAACGTCATCGGGTTTGATTTCGATCACAAGCTGGACCCTGTGGACGCCAGTTTCGTTGTCATC
CTGATTTCGGTCTGGAAACAGATCAGCATCAACTTCATCTTTTTCCTTGCAGGTCTGCAGGGCATCCCGAAATCGGTGCA
GGAAGCGGCCAAGATGGATTGCAACAGTTCCACCCGGCGGTTCTGGACGATCACCTTTCCGCTGCTCGCGCCGACGACCT
TCTTTCTGGTGGTCATCAACATCACCTATGCTTTCTTTGAAACCTTCGGGATCATCGACACGACAACGCAGGGCGCACCC
GGTGGCTCCACCGCGACGCTGGTTTACAAGGTCTATCAGGACGGTTTCCGCGGGGCAGATATTGGCGGGTCATCCGCGCA
ATCTGTTGTTTTGATGATCATGGTTCTGGCGCTCACCGTGGTGCAGTTCCGATATATCGAGCGAAAGGTGCATTACTGA

Upstream 100 bases:

>100_bases
GCCCGGTTCCACGCAACCGTCAACTAAGCGTTCGTAACGACAGGCCAGCGGGTGAGATCGCCCGCTGGCCCAATCATAAA
AACCAAAGGGGTCGGAATGT

Downstream 100 bases:

>100_bases
TGGACCGTACACCGATTTCCACCCACATCATCCTGATCATCGGTGCGCTTTTCATGACGCTGCCGGTCTGGGTCGCCTTT
GCGACCTCGACCCATGCGCC

Product: glycerol-3-phosphate ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKRVQFEHSAIPYLFIAPQIIIISIFFLWPSAQAIYQSFLLEDAFGLSSQFVWFKNYSDTILNASWLQAAGFTLVFSSLV
TFLSLALALLLAVKANEVIHGASTYKTMLMWAYAIAPPVAGLMGNLMFNPIIGDLYSFMNVIGFDFDHKLDPVDASFVVI
LISVWKQISINFIFFLAGLQGIPKSVQEAAKMDCNSSTRRFWTITFPLLAPTTFFLVVINITYAFFETFGIIDTTTQGAP
GGSTATLVYKVYQDGFRGADIGGSSAQSVVLMIMVLALTVVQFRYIERKVHY

Sequences:

>Translated_292_residues
MKRVQFEHSAIPYLFIAPQIIIISIFFLWPSAQAIYQSFLLEDAFGLSSQFVWFKNYSDTILNASWLQAAGFTLVFSSLV
TFLSLALALLLAVKANEVIHGASTYKTMLMWAYAIAPPVAGLMGNLMFNPIIGDLYSFMNVIGFDFDHKLDPVDASFVVI
LISVWKQISINFIFFLAGLQGIPKSVQEAAKMDCNSSTRRFWTITFPLLAPTTFFLVVINITYAFFETFGIIDTTTQGAP
GGSTATLVYKVYQDGFRGADIGGSSAQSVVLMIMVLALTVVQFRYIERKVHY
>Mature_292_residues
MKRVQFEHSAIPYLFIAPQIIIISIFFLWPSAQAIYQSFLLEDAFGLSSQFVWFKNYSDTILNASWLQAAGFTLVFSSLV
TFLSLALALLLAVKANEVIHGASTYKTMLMWAYAIAPPVAGLMGNLMFNPIIGDLYSFMNVIGFDFDHKLDPVDASFVVI
LISVWKQISINFIFFLAGLQGIPKSVQEAAKMDCNSSTRRFWTITFPLLAPTTFFLVVINITYAFFETFGIIDTTTQGAP
GGSTATLVYKVYQDGFRGADIGGSSAQSVVLMIMVLALTVVQFRYIERKVHY

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=291, Percent_Identity=45.0171821305842, Blast_Score=248, Evalue=3e-67,
Organism=Escherichia coli, GI1787570, Length=269, Percent_Identity=28.2527881040892, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790465, Length=233, Percent_Identity=27.4678111587983, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32530; Mature: 32530

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVQFEHSAIPYLFIAPQIIIISIFFLWPSAQAIYQSFLLEDAFGLSSQFVWFKNYSDT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCH
ILNASWLQAAGFTLVFSSLVTFLSLALALLLAVKANEVIHGASTYKTMLMWAYAIAPPVA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GLMGNLMFNPIIGDLYSFMNVIGFDFDHKLDPVDASFVVILISVWKQISINFIFFLAGLQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GIPKSVQEAAKMDCNSSTRRFWTITFPLLAPTTFFLVVINITYAFFETFGIIDTTTQGAP
CCCHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCC
GGSTATLVYKVYQDGFRGADIGGSSAQSVVLMIMVLALTVVQFRYIERKVHY
CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRVQFEHSAIPYLFIAPQIIIISIFFLWPSAQAIYQSFLLEDAFGLSSQFVWFKNYSDT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCH
ILNASWLQAAGFTLVFSSLVTFLSLALALLLAVKANEVIHGASTYKTMLMWAYAIAPPVA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GLMGNLMFNPIIGDLYSFMNVIGFDFDHKLDPVDASFVVILISVWKQISINFIFFLAGLQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GIPKSVQEAAKMDCNSSTRRFWTITFPLLAPTTFFLVVINITYAFFETFGIIDTTTQGAP
CCCHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCC
GGSTATLVYKVYQDGFRGADIGGSSAQSVVLMIMVLALTVVQFRYIERKVHY
CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]