| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is modA [H]
Identifier: 110680116
GI number: 110680116
Start: 2789801
End: 2790649
Strand: Direct
Name: modA [H]
Synonym: RD1_2913
Alternate gene names: 110680116
Gene position: 2789801-2790649 (Clockwise)
Preceding gene: 110680115
Following gene: 110680117
Centisome position: 67.5
GC content: 63.02
Gene sequence:
>849_bases TTGACGCCGATTGTGCCACCACAACGCGGGAAGCCTCTTGCGCCGCGCCTGTCGCTGCGGGACAACGGCCCTATGTCTGA CGTTTTGCGGCGCATCCTGTTCATCCTGGCGAGCGTTCTGTGCGCCACCGCCTGCCTGCCTGCGGCCGCAGGGCAGATCA CGGTTTTTGCCGCCGCGAGCCTGAAGGAAGCGATTGACGAGATATCAGCCGATTTCACTCGCGCCACCGGCGTTGAGGTT GCGGCGTCCTATGCCGGATCCTCCGCACTGGCGCGCCAGATCGAATTTGGTGCCCCGGCCGATGTTTTTCTCTCCGCCAG CACGGAGTGGATGGACCACCTTGAGCACAACAACCGGATCGAACCAACCACCCGCTTTGACCTTGTGGGCAACCGGCTTG TTCTGATCGGCCCCGCCGCGCAGACGGCAGCTTTCGAGATTTCTGCCAATACGAACCTTTTGCACATGCTGGCAGGCGGT CGCCTCGCGATGGCCTTGACCGATGCCGTCCCTGCGGGAATCTACGGAAAAACGGCCTTGCAGCGGCTCGGCCTGTGGGA GGGCGTCGCCCCGATGGTCGCGCAAACCGACAACGTGCGCGCGGCCCTGTCGCTGGTGTCGCTGGGTGCCGCGCCCTTGG GCATCGTCTATGCCACGGATGCGCAGGCGGATCAGAACGTCAGCCTGCGCGCCACCTTTCCGCCCCACACACACCCGCCC ATCATCTATCCGGTTGCCTTGGTCAAAGGCGCAAAATCTCCACAGGCGCAGGCGTTTCTTGACTATCTCACCGGTGACGC GGCAGATAAGGTGTTCGCAGATCTCGGGTTTCTGGTGGGGGCAGAATAA
Upstream 100 bases:
>100_bases ATAAGCGATGTGTTCTTTCGCAAACTGCTGATCAGCCTGACGCTTGTGTCCGGATGCGCCCTGTTGATTCGTGAAATCCT CTAGCGTCTGGCGCAGCCAT
Downstream 100 bases:
>100_bases AGCGTGCGATGGACTGGTTAAGCCCGCAAGAGTGGAACGCCGTCGCACTGTCGCTGCGCGTCGCGTTCTGGGCCACGCTG TGCAGCCTGCCCTTTGCGCT
Product: molybdate ABC transporter, periplasmic molybdate-binding protein
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MTPIVPPQRGKPLAPRLSLRDNGPMSDVLRRILFILASVLCATACLPAAAGQITVFAAASLKEAIDEISADFTRATGVEV AASYAGSSALARQIEFGAPADVFLSASTEWMDHLEHNNRIEPTTRFDLVGNRLVLIGPAAQTAAFEISANTNLLHMLAGG RLAMALTDAVPAGIYGKTALQRLGLWEGVAPMVAQTDNVRAALSLVSLGAAPLGIVYATDAQADQNVSLRATFPPHTHPP IIYPVALVKGAKSPQAQAFLDYLTGDAADKVFADLGFLVGAE
Sequences:
>Translated_282_residues MTPIVPPQRGKPLAPRLSLRDNGPMSDVLRRILFILASVLCATACLPAAAGQITVFAAASLKEAIDEISADFTRATGVEV AASYAGSSALARQIEFGAPADVFLSASTEWMDHLEHNNRIEPTTRFDLVGNRLVLIGPAAQTAAFEISANTNLLHMLAGG RLAMALTDAVPAGIYGKTALQRLGLWEGVAPMVAQTDNVRAALSLVSLGAAPLGIVYATDAQADQNVSLRATFPPHTHPP IIYPVALVKGAKSPQAQAFLDYLTGDAADKVFADLGFLVGAE >Mature_281_residues TPIVPPQRGKPLAPRLSLRDNGPMSDVLRRILFILASVLCATACLPAAAGQITVFAAASLKEAIDEISADFTRATGVEVA ASYAGSSALARQIEFGAPADVFLSASTEWMDHLEHNNRIEPTTRFDLVGNRLVLIGPAAQTAAFEISANTNLLHMLAGGR LAMALTDAVPAGIYGKTALQRLGLWEGVAPMVAQTDNVRAALSLVSLGAAPLGIVYATDAQADQNVSLRATFPPHTHPPI IYPVALVKGAKSPQAQAFLDYLTGDAADKVFADLGFLVGAE
Specific function: Involved in the transport of molybdenum into the cell. Binds molybdate with high specificity and affinity [H]
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein modA family [H]
Homologues:
Organism=Escherichia coli, GI1786979, Length=230, Percent_Identity=47.8260869565217, Blast_Score=214, Evalue=3e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005950 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 29538; Mature: 29407
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPIVPPQRGKPLAPRLSLRDNGPMSDVLRRILFILASVLCATACLPAAAGQITVFAAAS CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHH LKEAIDEISADFTRATGVEVAASYAGSSALARQIEFGAPADVFLSASTEWMDHLEHNNRI HHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHCCCCCHHEEEECCHHHHHHHHCCCCC EPTTRFDLVGNRLVLIGPAAQTAAFEISANTNLLHMLAGGRLAMALTDAVPAGIYGKTAL CCCHHEEECCCEEEEEECCCCCEEEEEECCCCEEEEECCCEEEEEEHHHCCCCCHHHHHH QRLGLWEGVAPMVAQTDNVRAALSLVSLGAAPLGIVYATDAQADQNVSLRATFPPHTHPP HHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCCCCCC IIYPVALVKGAKSPQAQAFLDYLTGDAADKVFADLGFLVGAE EEEHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure TPIVPPQRGKPLAPRLSLRDNGPMSDVLRRILFILASVLCATACLPAAAGQITVFAAAS CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHH LKEAIDEISADFTRATGVEVAASYAGSSALARQIEFGAPADVFLSASTEWMDHLEHNNRI HHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHCCCCCHHEEEECCHHHHHHHHCCCCC EPTTRFDLVGNRLVLIGPAAQTAAFEISANTNLLHMLAGGRLAMALTDAVPAGIYGKTAL CCCHHEEECCCEEEEEECCCCCEEEEEECCCCEEEEECCCEEEEEEHHHCCCCCHHHHHH QRLGLWEGVAPMVAQTDNVRAALSLVSLGAAPLGIVYATDAQADQNVSLRATFPPHTHPP HHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCCCCCC IIYPVALVKGAKSPQAQAFLDYLTGDAADKVFADLGFLVGAE EEEHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7860583; 8564363; 8905232; 9278503; 8576221; 9302996 [H]