Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110680107

Identifier: 110680107

GI number: 110680107

Start: 2784110

End: 2784346

Strand: Reverse

Name: 110680107

Synonym: RD1_2904

Alternate gene names: NA

Gene position: 2784346-2784110 (Counterclockwise)

Preceding gene: 110680112

Following gene: 110680106

Centisome position: 67.37

GC content: 55.27

Gene sequence:

>237_bases
GTGTCAGGCTCATCAGTCTGCGGAACCGGTGATCTGGCCAGTGACCACATGTTCGATGTCCAGACCATCCACGGTCAGAA
CGACCTTGGCTTCAAAGGTCTTGCCGCCCGTGTCCGCGGCATTGCGCATGCCTTCTTCGATGGCCTGCTGGGATGTGACG
CCAACCTGCTTGAGGAATTTGCGCATGGACATGTTGAAGTCTTCGTTCATTCTATCTCTCCTTGGGTGGATGTGTAG

Upstream 100 bases:

>100_bases
TTTTCATCAACGGTCAGGGCCTTGACCAGACCCGCGGCCACGATGTCGCTGTCGGATATGGGGTCCGACACTGTTTTCAA
AGCGGCCAGAACCGCATCAC

Downstream 100 bases:

>100_bases
TGCTTGACGCTTGTGTGAGGGGGCTTTTAGATGGACCCTACGGAAAAAGCCAAAGGATCAGCCATTTGAAAGCCATTCTT
GGGGCGTTTTGTGTCAGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 77

Protein sequence:

>78_residues
MSGSSVCGTGDLASDHMFDVQTIHGQNDLGFKGLAARVRGIAHAFFDGLLGCDANLLEEFAHGHVEVFVHSISPWVDV

Sequences:

>Translated_78_residues
MSGSSVCGTGDLASDHMFDVQTIHGQNDLGFKGLAARVRGIAHAFFDGLLGCDANLLEEFAHGHVEVFVHSISPWVDV
>Mature_77_residues
SGSSVCGTGDLASDHMFDVQTIHGQNDLGFKGLAARVRGIAHAFFDGLLGCDANLLEEFAHGHVEVFVHSISPWVDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8311; Mature: 8180

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSSVCGTGDLASDHMFDVQTIHGQNDLGFKGLAARVRGIAHAFFDGLLGCDANLLEEF
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AHGHVEVFVHSISPWVDV
CCCCEEHHEECCCCCCCC
>Mature Secondary Structure 
SGSSVCGTGDLASDHMFDVQTIHGQNDLGFKGLAARVRGIAHAFFDGLLGCDANLLEEF
CCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AHGHVEVFVHSISPWVDV
CCCCEEHHEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA