Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110680112

Identifier: 110680112

GI number: 110680112

Start: 2786597

End: 2787403

Strand: Reverse

Name: 110680112

Synonym: RD1_2909

Alternate gene names: NA

Gene position: 2787403-2786597 (Counterclockwise)

Preceding gene: 110680113

Following gene: 110680107

Centisome position: 67.44

GC content: 57.37

Gene sequence:

>807_bases
ATGATACATCGGTTCCTATGCGCGCTCAGCGCAGTTTTCATGGCCAGTGCAAGCCTGGCAGATGAGATGAAGCTGGCCGT
GACGACCTCGTTTGAAAACTCGGGTCTGTCGGATGTGTTGTTGCCCGCGATCAAGGAGGATCTTGATCTGGATGTCCAGT
TGCTGGTGGTCGGCACCGGGCAGGCATTGCGGCTGGGGCAGGCCGGGGATGTGGATGCGATACTGGTGCATTCGCGCACC
GCGGAAGAAGCCTTTGTTGCCGATGGCTATGGCACGCATCGCCGCGAAATCATGTATAATGACTTTGTGATTATTGGTCC
CTCGGACGATCCGGCGGCGATCAGCAATGTGGCTTCGGCCGTTGAGGCCTTGCAGAACATCGCCACCGCCGAACCTGCCT
TTGTCAGCCGTGGCGATGACAGCGGGACGCATAAAAAAGAACTCAGCCTGTGGTCAGAGGCGGGATTTGATGCAGCAGCC
TTTGGCCCATGGTATCGCGAAGTCGGTGCCGGTATGGGGGCGAGCCTGAATACTTCCGCAGGACTTGGTGCGTATATTCT
GGCGGATCGCGCCAGTTGGCTGAATTTTGGCAACAAGGCGGATCTGGCGCTGCTTTATGCGGGCGATCCGGTGTTGTTCA
ACCAATATGCCTATCTGCCTGCGAACCCTGAGAAACACGCCCACATACGCAACGATCTTGCTTTGGCGCTTGAGGCTTGG
CTGACCAGCCCGCGCGCGGCGGAATTGATCAACAGCTACATGATCAATGGCGAGACGCTGTTCACCTTCAACGCGCAGCC
GCAATAG

Upstream 100 bases:

>100_bases
TGCTGGATGGCGCTGTGAGAGAATCCGGGCCTGCGCAGGCTTTCTTTGCGACGCCGCAGACACCTGAATTACAAGCATTT
TTCAGAGGAGATATCATCGG

Downstream 100 bases:

>100_bases
ACCTCAGTGCTGGTGCGGCTCGTCGTCCAGTGAGCCGTGCACGGCAAACTGGTCGATGCCCGCATCCTGCGGCTCGATCA
TCCCATAGCTTTCCTTGACC

Product: tungstate ABC transporter, tungstate-binding protein

Products: NA

Alternate protein names: Signal Peptide Protein; TUNGstate ABC Transporter Permease; Molybdate Or TUNGstate Transport; TUNGstate ABC Transporter Permease-Like Protein; ABC TUNGstate Transporter Permease Component; ABC-Type Transport System Permease Component; ABC Transporter Periplasmic Protein; ABC-Type TUNGstate Transport System Permease Component-Like; Signal Peptide; TUNGstate Abc Transporter Permease; ABC-Type Transport Protein Permease Component; ABC Transporter; Periplasmic Protein; Basic Organic Compound ABC-Transporter; ABC Transporter Permease Protein

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MIHRFLCALSAVFMASASLADEMKLAVTTSFENSGLSDVLLPAIKEDLDLDVQLLVVGTGQALRLGQAGDVDAILVHSRT
AEEAFVADGYGTHRREIMYNDFVIIGPSDDPAAISNVASAVEALQNIATAEPAFVSRGDDSGTHKKELSLWSEAGFDAAA
FGPWYREVGAGMGASLNTSAGLGAYILADRASWLNFGNKADLALLYAGDPVLFNQYAYLPANPEKHAHIRNDLALALEAW
LTSPRAAELINSYMINGETLFTFNAQPQ

Sequences:

>Translated_268_residues
MIHRFLCALSAVFMASASLADEMKLAVTTSFENSGLSDVLLPAIKEDLDLDVQLLVVGTGQALRLGQAGDVDAILVHSRT
AEEAFVADGYGTHRREIMYNDFVIIGPSDDPAAISNVASAVEALQNIATAEPAFVSRGDDSGTHKKELSLWSEAGFDAAA
FGPWYREVGAGMGASLNTSAGLGAYILADRASWLNFGNKADLALLYAGDPVLFNQYAYLPANPEKHAHIRNDLALALEAW
LTSPRAAELINSYMINGETLFTFNAQPQ
>Mature_268_residues
MIHRFLCALSAVFMASASLADEMKLAVTTSFENSGLSDVLLPAIKEDLDLDVQLLVVGTGQALRLGQAGDVDAILVHSRT
AEEAFVADGYGTHRREIMYNDFVIIGPSDDPAAISNVASAVEALQNIATAEPAFVSRGDDSGTHKKELSLWSEAGFDAAA
FGPWYREVGAGMGASLNTSAGLGAYILADRASWLNFGNKADLALLYAGDPVLFNQYAYLPANPEKHAHIRNDLALALEAW
LTSPRAAELINSYMINGETLFTFNAQPQ

Specific function: Unknown

COG id: COG2998

COG function: function code H; ABC-type tungstate transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28668; Mature: 28668

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHRFLCALSAVFMASASLADEMKLAVTTSFENSGLSDVLLPAIKEDLDLDVQLLVVGTG
CHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEECC
QALRLGQAGDVDAILVHSRTAEEAFVADGYGTHRREIMYNDFVIIGPSDDPAAISNVASA
CEEECCCCCCCCEEEEECCCCCHHEEECCCCCCCCEEEECCEEEECCCCCHHHHHHHHHH
VEALQNIATAEPAFVSRGDDSGTHKKELSLWSEAGFDAAAFGPWYREVGAGMGASLNTSA
HHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHCCCCCHHCCHHHHHHCCCCCCCCCCCC
GLGAYILADRASWLNFGNKADLALLYAGDPVLFNQYAYLPANPEKHAHIRNDLALALEAW
CCCEEEEECCHHHHCCCCCCCEEEEEECCCEEECCEEECCCCCCCHHHHHHHHHHHHHHH
LTSPRAAELINSYMINGETLFTFNAQPQ
HCCCHHHHHHHHHEECCEEEEEECCCCC
>Mature Secondary Structure
MIHRFLCALSAVFMASASLADEMKLAVTTSFENSGLSDVLLPAIKEDLDLDVQLLVVGTG
CHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEECC
QALRLGQAGDVDAILVHSRTAEEAFVADGYGTHRREIMYNDFVIIGPSDDPAAISNVASA
CEEECCCCCCCCEEEEECCCCCHHEEECCCCCCCCEEEECCEEEECCCCCHHHHHHHHHH
VEALQNIATAEPAFVSRGDDSGTHKKELSLWSEAGFDAAAFGPWYREVGAGMGASLNTSA
HHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHCCCCCHHCCHHHHHHCCCCCCCCCCCC
GLGAYILADRASWLNFGNKADLALLYAGDPVLFNQYAYLPANPEKHAHIRNDLALALEAW
CCCEEEEECCHHHHCCCCCCCEEEEEECCCEEECCEEECCCCCCCHHHHHHHHHHHHHHH
LTSPRAAELINSYMINGETLFTFNAQPQ
HCCCHHHHHHHHHEECCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA