Click here to switch to the map view.

The map label for this gene is torD

Identifier: 110680102

GI number: 110680102

Start: 2779253

End: 2779861

Strand: Reverse

Name: torD

Synonym: RD1_2899

Alternate gene names: NA

Gene position: 2779861-2779253 (Counterclockwise)

Preceding gene: 110680103

Following gene: 110680101

Centisome position: 67.26

GC content: 59.11

Gene sequence:

>609_bases
ATGACCGCGTCAGCCCAGACCATCGAGGTCGACCCCGAAGACCGCCTGCGCGCGGATCTCTACAACTACCTTGGCCTGCT
GCTGGCGCGTCCCGCAGGGGAGATGCTGCTGGAACAGACGGCGGGTCTGAGCGGTGATGACAGCCTGCTGGGCGAAGCGA
TCGAAGGTCTGGCGCGCGTCGCCAAGGCGAGCAAACCAAAGAGTGTCGAGCGTGAATTCAACGCGTTGTTCATCGGCCTG
GGGCGCGGCGAACTGCTGCCCTATGCCAGCTATTACCTGACCGGTTTCCTGAATGAAAAGCCACTGGCCAAGTTGCGTCA
GGACATGGCGTCTCTGCAGGTCACGCGCGCGGACAATGTCTTTGAGCCCGAGGACAGCATCGCTTCACTGATGGAAACTA
TGGGCGGTCTGATCGTGGGCCGTTTTGGCACCAAAGTGTCTCTGGACCAGCAAAAGACGTTTTACAACAACCATCTGGGC
CCTTGGGCGACGCATTTCTTTACCGATCTGGAGGCCGCCAAGTCGTCGGTGTTCTATGCGTCTGTCGGCGCGGTCGGGCG
TGAATTCATGAGTATTGAACGCGAAGCATTTCGCATGACGGCAGGATAA

Upstream 100 bases:

>100_bases
AGGAAGAACCCGCGCCAGCACGGAGCGAACACTCCGCTGAAGCCGAAGAGGCGGCCCCATCGCCGCGGCGCATGCGGTTC
CAGTTTGAGGAGGCAAGCGC

Downstream 100 bases:

>100_bases
CCTGCACCACAGGGCAGGACGCTGCCCGACACAAACGAAAGGACGTGAAACATGGCTAAGAAAACGGAAGGCGAGGCAAG
TCGTCGCGATTTTCTGAAAC

Product: chaperone TorD

Products: NA

Alternate protein names: Cytoplasmic Chaperone rD; Chaperone rD Family; Chaperone; RD Family Cytoplasmic Chaperone; RA Specific Chaperone; Cytoplasmic Chaperone rD Subfamily; Formate Dehydrogenase-Specific Chaperone; Chaperone Protein rD; Chaperone rD; Chaperone Protein rD Family; Cytoplasmic Chaperone rd Family Protein

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MTASAQTIEVDPEDRLRADLYNYLGLLLARPAGEMLLEQTAGLSGDDSLLGEAIEGLARVAKASKPKSVEREFNALFIGL
GRGELLPYASYYLTGFLNEKPLAKLRQDMASLQVTRADNVFEPEDSIASLMETMGGLIVGRFGTKVSLDQQKTFYNNHLG
PWATHFFTDLEAAKSSVFYASVGAVGREFMSIEREAFRMTAG

Sequences:

>Translated_202_residues
MTASAQTIEVDPEDRLRADLYNYLGLLLARPAGEMLLEQTAGLSGDDSLLGEAIEGLARVAKASKPKSVEREFNALFIGL
GRGELLPYASYYLTGFLNEKPLAKLRQDMASLQVTRADNVFEPEDSIASLMETMGGLIVGRFGTKVSLDQQKTFYNNHLG
PWATHFFTDLEAAKSSVFYASVGAVGREFMSIEREAFRMTAG
>Mature_201_residues
TASAQTIEVDPEDRLRADLYNYLGLLLARPAGEMLLEQTAGLSGDDSLLGEAIEGLARVAKASKPKSVEREFNALFIGLG
RGELLPYASYYLTGFLNEKPLAKLRQDMASLQVTRADNVFEPEDSIASLMETMGGLIVGRFGTKVSLDQQKTFYNNHLGP
WATHFFTDLEAAKSSVFYASVGAVGREFMSIEREAFRMTAG

Specific function: Unknown

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22142; Mature: 22011

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASAQTIEVDPEDRLRADLYNYLGLLLARPAGEMLLEQTAGLSGDDSLLGEAIEGLARV
CCCCCCEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
AKASKPKSVEREFNALFIGLGRGELLPYASYYLTGFLNEKPLAKLRQDMASLQVTRADNV
HHCCCCHHHHHHHCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
FEPEDSIASLMETMGGLIVGRFGTKVSLDQQKTFYNNHLGPWATHFFTDLEAAKSSVFYA
CCCHHHHHHHHHHHCCEEEECCCCEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SVGAVGREFMSIEREAFRMTAG
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TASAQTIEVDPEDRLRADLYNYLGLLLARPAGEMLLEQTAGLSGDDSLLGEAIEGLARV
CCCCCEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
AKASKPKSVEREFNALFIGLGRGELLPYASYYLTGFLNEKPLAKLRQDMASLQVTRADNV
HHCCCCHHHHHHHCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
FEPEDSIASLMETMGGLIVGRFGTKVSLDQQKTFYNNHLGPWATHFFTDLEAAKSSVFYA
CCCHHHHHHHHHHHCCEEEECCCCEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SVGAVGREFMSIEREAFRMTAG
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA