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The map label for this gene is 110680103

Identifier: 110680103

GI number: 110680103

Start: 2779858

End: 2780463

Strand: Reverse

Name: 110680103

Synonym: RD1_2900

Alternate gene names: NA

Gene position: 2780463-2779858 (Counterclockwise)

Preceding gene: 110680104

Following gene: 110680102

Centisome position: 67.27

GC content: 62.71

Gene sequence:

>606_bases
GTGAGCGGCAAAACGACTTTCTGGGCGCGCAGGCGCGCCGCCGTTCAGGCCGAAGCAGACGCGGAATTGCGCGCAACAGA
AGAAGCACAAGCCCAGGCACGCGCTGAGGCCCTCGCCGAAAAAGATGATGCCGAGGTCCTGCAGGAAATGGGCCTGCCGG
ATCCTGCACTATTGCAGCAGGGCGATGATTTTTCCGCCTTCATGGCGCGTGACGTGCCCGAGCGCCTGCGTCGTCAGGCG
CTGCGCACACTTTGGCGCAGCAATCCCGTGCTGGCATGCGTGGATGGCCTGAATGAGTATGACGATGACTACCGCGCTGC
GATGCTGCTGAGCGAGCCGGTCAAGACCGCCTATCAGGTGGGCAAGGGCATGACGAAGCATATCGAGGAAATGCAAAGAC
AAGCCGAAGCCGCCGAAGCCACCGAAGAAGAAAGCGTTGCCGAGGTGGAAGACGACGCGGTCATCGCACAGGTGCAGGAA
TCCGACGTGCCCGCAGTTGAGCAGGAAGAACCCGCGCCAGCACGGAGCGAACACTCCGCTGAAGCCGAAGAGGCGGCCCC
ATCGCCGCGGCGCATGCGGTTCCAGTTTGAGGAGGCAAGCGCATGA

Upstream 100 bases:

>100_bases
AGCGGGTGGATCGCAAAGATGACGGCATTGGTGATCGCCGCATCTCACAGGCAACGGATGTGTATCGTGCGCCTGTCTCA
CACCCCCGCGAGGCGGCAGA

Downstream 100 bases:

>100_bases
CCGCGTCAGCCCAGACCATCGAGGTCGACCCCGAAGACCGCCTGCGCGCGGATCTCTACAACTACCTTGGCCTGCTGCTG
GCGCGTCCCGCAGGGGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MSGKTTFWARRRAAVQAEADAELRATEEAQAQARAEALAEKDDAEVLQEMGLPDPALLQQGDDFSAFMARDVPERLRRQA
LRTLWRSNPVLACVDGLNEYDDDYRAAMLLSEPVKTAYQVGKGMTKHIEEMQRQAEAAEATEEESVAEVEDDAVIAQVQE
SDVPAVEQEEPAPARSEHSAEAEEAAPSPRRMRFQFEEASA

Sequences:

>Translated_201_residues
MSGKTTFWARRRAAVQAEADAELRATEEAQAQARAEALAEKDDAEVLQEMGLPDPALLQQGDDFSAFMARDVPERLRRQA
LRTLWRSNPVLACVDGLNEYDDDYRAAMLLSEPVKTAYQVGKGMTKHIEEMQRQAEAAEATEEESVAEVEDDAVIAQVQE
SDVPAVEQEEPAPARSEHSAEAEEAAPSPRRMRFQFEEASA
>Mature_200_residues
SGKTTFWARRRAAVQAEADAELRATEEAQAQARAEALAEKDDAEVLQEMGLPDPALLQQGDDFSAFMARDVPERLRRQAL
RTLWRSNPVLACVDGLNEYDDDYRAAMLLSEPVKTAYQVGKGMTKHIEEMQRQAEAAEATEEESVAEVEDDAVIAQVQES
DVPAVEQEEPAPARSEHSAEAEEAAPSPRRMRFQFEEASA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22294; Mature: 22162

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGKTTFWARRRAAVQAEADAELRATEEAQAQARAEALAEKDDAEVLQEMGLPDPALLQQ
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHC
GDDFSAFMARDVPERLRRQALRTLWRSNPVLACVDGLNEYDDDYRAAMLLSEPVKTAYQV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCHHCCHHHHHHHHHHHHHHHHHHH
GKGMTKHIEEMQRQAEAAEATEEESVAEVEDDAVIAQVQESDVPAVEQEEPAPARSEHSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
EAEEAAPSPRRMRFQFEEASA
HHHHHCCCCHHEEEECCCCCC
>Mature Secondary Structure 
SGKTTFWARRRAAVQAEADAELRATEEAQAQARAEALAEKDDAEVLQEMGLPDPALLQQ
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHC
GDDFSAFMARDVPERLRRQALRTLWRSNPVLACVDGLNEYDDDYRAAMLLSEPVKTAYQV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCHHCCHHHHHHHHHHHHHHHHHHH
GKGMTKHIEEMQRQAEAAEATEEESVAEVEDDAVIAQVQESDVPAVEQEEPAPARSEHSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
EAEEAAPSPRRMRFQFEEASA
HHHHHCCCCHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA