Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is malQ [H]

Identifier: 110680076

GI number: 110680076

Start: 2742505

End: 2744502

Strand: Reverse

Name: malQ [H]

Synonym: RD1_2871

Alternate gene names: 110680076

Gene position: 2744502-2742505 (Counterclockwise)

Preceding gene: 110680077

Following gene: 110680075

Centisome position: 66.4

GC content: 64.01

Gene sequence:

>1998_bases
ATGCGTGGTGATGCCGCCTTGTCCCGCCTTGCGCAAGAGGTCGGCGTTGTGGCCGAATATCAGGACATGCAGGGCATCAC
GCATGTAACGCCCCCCGAGACGCAGTGGGCGATGTTGCGCGCCAATGGCTATCCTGCCCAAACCCATGCCGAAATCCGCG
AAACACTGGCGGCGTTGCACGCGGCGAGGCAAACCGCCTATCTGCAGCAGGAGATTGTTCTGCGGTGTGATCAGCCGTGT
GACATTACCTGCGCGGCACCGGTCACATGGCATGTGCTGTGCGAAGGGTCGCAAGAGGTTCTCGCAGAGGGGCGCGCACA
ATCCCGGATTGCACTGCCCGGCTTGCGGATGGGGGTGCATACCCTTGTGCTGGAGGGCGCAAAGGGGGTTCAGGAAACCT
GGCTGATCACGGCACCTGCGGGCGCGCCATCGCTGGAACAGATTGCCGGAACACCGCGGTGCTGGGGTGTGATGGCCGCC
CTTTACGGGCTGGGTCCCGCTGCATCGCAGATCGGCAGCTTTGATGATCTGGCGCAGGCCGCGGCGGTTTGCGGTCAAGC
AGGCGCGGCGTTTCTGGGGATCAACCCGGTGCATGCATTGGGCATGGCGGCGGGGGACACGATCAGCCCTTATTCCCCCA
CACATCGCGGGTTTCTCAATACCGATCATATCACGATGAGCAGTCGCACGCCCACGCCAGGCGACGCGGGCGATCTGCTG
GACTATGCGCAGCACCGCCACGCGCAACGGCCCGCCCTGAGGCGTGAATTCGAGGCATTTCTGGGCATGTCGCCCGCCCC
TGAGCGCAGCGCTTTCGATGCGTTTTGTGATGTCGAAGGGGCGCGTCTGATTGAATTCGCCATTTTCGAACAGGTCAGCC
AGCAACACGGACCCGATTGGCGGGTCTGGCCGCACAGGCTGCACGATCCGAAAAACGCGCTGCATGAGATATCCAACAGG
GATCTGATGTTTCACAAATGGCTGCAGTGGCGCGCGGATACACAGCTTGCCAGCGCACAGAAAGCCGCGCGTGACGCAGG
GATGGCGCTGGGGCTCTATCTTGATCTGGCCGTGGGCGCGCGTGTTGGCGGGGCCGAGACATGGGGCACAGACACGGCCA
CAGCCGATGGCGTCTCGCTTGGCGCACCGCCGGATCACCTCAGCCCGGCAGGGCAGAACTGGCAGCTTGCAGCGCTCTCC
CCGGTCAGGCTCAAGGCGACGCGCTACGCCGCCCTGCGCGCCATTCTGGCGAAGAACATGCGACATGCAGGGCTGATGCG
GATCGACCATGCCCTGGGGCTGAGCCGCAGCTTCTGGATCCCGCAGGATGGCAGCCCGGGGGCCTATATGCGCCAGCCAC
TGAAATCACTGGTGGCGCTGATTGCCATTGAGGCGCATCGCGCAGGCACGGTGATCGTGGGCGAAGACCTTGGCCTTGTC
CCGGACGGGTTTCGTGCCGAGATGGCGCGCCACGGGTTTTACGGCTATTGCGTGCTGCAATATGAAAAAGACGCCGAGGG
GGTGCTTCTGCCACCGGAGCATTTGCGCGCGCAGTCTCTGGCCTGCTTTGGCACGCATGACACGCCGACGCTGGCGGGGT
TCTGGCAGGGGCGTGACATTGACTGGTGGCATCGCTTGGGTTGGATCGACGCAAGCGACGCCGCACGGGCGCGACGCGCA
AGGGTGCAGGAAAAACGCCAGCTGGTTGCGACCCCGGCGCCCAAACGCTTGCCCAGAAAGGTCACAGCAGCCGTCAGGGA
CAAGGTGTACGCGGATCTGGCGGCATCCCCGGCTGCCTTGGTGGCGGTGCAGCTTGACGATATGTTGTCTTTGACAGAGG
CTCAGAACCTGCCGGGGACCGTTGACGCGCATCCAAACTGGCGTCGGCGCTACCCGGTGCGCGGGCAGGCTCTGGCCAAG
GACAAGGCACTGCAGGCCACAAGCCTGATCATGGCGCGCGCCGCGCGAAATACCGCAGAACGAAAGGACGAGCGATGA

Upstream 100 bases:

>100_bases
CGCACCGGGGCTGCAGCGCGCGGCAAATTGGAAGCGGGGGAACTGGTGGTTGAAGCCGAAGAGGTCATGGCGCTGATCCT
GTCGCCCATGGATGCGCCCG

Downstream 100 bases:

>100_bases
CCCTGTCGACCATCAAAAAAGGCCCTTTTGAGGGTCAGAAGCCCGGCACCTCGGGGCTGCGCAAGAAAACGCGGGTGTTT
ATGGAGCCGGGGTATCTGGA

Product: 4-alpha-glucanotransferase

Products: NA

Alternate protein names: Amylomaltase; Disproportionating enzyme; D-enzyme [H]

Number of amino acids: Translated: 665; Mature: 665

Protein sequence:

>665_residues
MRGDAALSRLAQEVGVVAEYQDMQGITHVTPPETQWAMLRANGYPAQTHAEIRETLAALHAARQTAYLQQEIVLRCDQPC
DITCAAPVTWHVLCEGSQEVLAEGRAQSRIALPGLRMGVHTLVLEGAKGVQETWLITAPAGAPSLEQIAGTPRCWGVMAA
LYGLGPAASQIGSFDDLAQAAAVCGQAGAAFLGINPVHALGMAAGDTISPYSPTHRGFLNTDHITMSSRTPTPGDAGDLL
DYAQHRHAQRPALRREFEAFLGMSPAPERSAFDAFCDVEGARLIEFAIFEQVSQQHGPDWRVWPHRLHDPKNALHEISNR
DLMFHKWLQWRADTQLASAQKAARDAGMALGLYLDLAVGARVGGAETWGTDTATADGVSLGAPPDHLSPAGQNWQLAALS
PVRLKATRYAALRAILAKNMRHAGLMRIDHALGLSRSFWIPQDGSPGAYMRQPLKSLVALIAIEAHRAGTVIVGEDLGLV
PDGFRAEMARHGFYGYCVLQYEKDAEGVLLPPEHLRAQSLACFGTHDTPTLAGFWQGRDIDWWHRLGWIDASDAARARRA
RVQEKRQLVATPAPKRLPRKVTAAVRDKVYADLAASPAALVAVQLDDMLSLTEAQNLPGTVDAHPNWRRRYPVRGQALAK
DKALQATSLIMARAARNTAERKDER

Sequences:

>Translated_665_residues
MRGDAALSRLAQEVGVVAEYQDMQGITHVTPPETQWAMLRANGYPAQTHAEIRETLAALHAARQTAYLQQEIVLRCDQPC
DITCAAPVTWHVLCEGSQEVLAEGRAQSRIALPGLRMGVHTLVLEGAKGVQETWLITAPAGAPSLEQIAGTPRCWGVMAA
LYGLGPAASQIGSFDDLAQAAAVCGQAGAAFLGINPVHALGMAAGDTISPYSPTHRGFLNTDHITMSSRTPTPGDAGDLL
DYAQHRHAQRPALRREFEAFLGMSPAPERSAFDAFCDVEGARLIEFAIFEQVSQQHGPDWRVWPHRLHDPKNALHEISNR
DLMFHKWLQWRADTQLASAQKAARDAGMALGLYLDLAVGARVGGAETWGTDTATADGVSLGAPPDHLSPAGQNWQLAALS
PVRLKATRYAALRAILAKNMRHAGLMRIDHALGLSRSFWIPQDGSPGAYMRQPLKSLVALIAIEAHRAGTVIVGEDLGLV
PDGFRAEMARHGFYGYCVLQYEKDAEGVLLPPEHLRAQSLACFGTHDTPTLAGFWQGRDIDWWHRLGWIDASDAARARRA
RVQEKRQLVATPAPKRLPRKVTAAVRDKVYADLAASPAALVAVQLDDMLSLTEAQNLPGTVDAHPNWRRRYPVRGQALAK
DKALQATSLIMARAARNTAERKDER
>Mature_665_residues
MRGDAALSRLAQEVGVVAEYQDMQGITHVTPPETQWAMLRANGYPAQTHAEIRETLAALHAARQTAYLQQEIVLRCDQPC
DITCAAPVTWHVLCEGSQEVLAEGRAQSRIALPGLRMGVHTLVLEGAKGVQETWLITAPAGAPSLEQIAGTPRCWGVMAA
LYGLGPAASQIGSFDDLAQAAAVCGQAGAAFLGINPVHALGMAAGDTISPYSPTHRGFLNTDHITMSSRTPTPGDAGDLL
DYAQHRHAQRPALRREFEAFLGMSPAPERSAFDAFCDVEGARLIEFAIFEQVSQQHGPDWRVWPHRLHDPKNALHEISNR
DLMFHKWLQWRADTQLASAQKAARDAGMALGLYLDLAVGARVGGAETWGTDTATADGVSLGAPPDHLSPAGQNWQLAALS
PVRLKATRYAALRAILAKNMRHAGLMRIDHALGLSRSFWIPQDGSPGAYMRQPLKSLVALIAIEAHRAGTVIVGEDLGLV
PDGFRAEMARHGFYGYCVLQYEKDAEGVLLPPEHLRAQSLACFGTHDTPTLAGFWQGRDIDWWHRLGWIDASDAARARRA
RVQEKRQLVATPAPKRLPRKVTAAVRDKVYADLAASPAALVAVQLDDMLSLTEAQNLPGTVDAHPNWRRRYPVRGQALAK
DKALQATSLIMARAARNTAERKDER

Specific function: Unknown

COG id: COG1640

COG function: function code G; 4-alpha-glucanotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the disproportionating enzyme family [H]

Homologues:

Organism=Escherichia coli, GI1789821, Length=659, Percent_Identity=29.2867981790592, Blast_Score=245, Evalue=7e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003385
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF02446 Glyco_hydro_77 [H]

EC number: =2.4.1.25 [H]

Molecular weight: Translated: 72325; Mature: 72325

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGDAALSRLAQEVGVVAEYQDMQGITHVTPPETQWAMLRANGYPAQTHAEIRETLAALH
CCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
AARQTAYLQQEIVLRCDQPCDITCAAPVTWHVLCEGSQEVLAEGRAQSRIALPGLRMGVH
HHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCHHHHHCCCCCCEEECCCHHHHHH
TLVLEGAKGVQETWLITAPAGAPSLEQIAGTPRCWGVMAALYGLGPAASQIGSFDDLAQA
HHHHHCCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHH
AAVCGQAGAAFLGINPVHALGMAAGDTISPYSPTHRGFLNTDHITMSSRTPTPGDAGDLL
HHHHHCCCCEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHH
DYAQHRHAQRPALRREFEAFLGMSPAPERSAFDAFCDVEGARLIEFAIFEQVSQQHGPDW
HHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
RVWPHRLHDPKNALHEISNRDLMFHKWLQWRADTQLASAQKAARDAGMALGLYLDLAVGA
CCCCHHCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCC
RVGGAETWGTDTATADGVSLGAPPDHLSPAGQNWQLAALSPVRLKATRYAALRAILAKNM
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
RHAGLMRIDHALGLSRSFWIPQDGSPGAYMRQPLKSLVALIAIEAHRAGTVIVGEDLGLV
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
PDGFRAEMARHGFYGYCVLQYEKDAEGVLLPPEHLRAQSLACFGTHDTPTLAGFWQGRDI
CCCHHHHHHHCCCEEEEEEEEECCCCCEECCHHHHHHHHEEEECCCCCCCEEEECCCCCC
DWWHRLGWIDASDAARARRARVQEKRQLVATPAPKRLPRKVTAAVRDKVYADLAASPAAL
CHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE
VAVQLDDMLSLTEAQNLPGTVDAHPNWRRRYPVRGQALAKDKALQATSLIMARAARNTAE
EEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RKDER
HCCCC
>Mature Secondary Structure
MRGDAALSRLAQEVGVVAEYQDMQGITHVTPPETQWAMLRANGYPAQTHAEIRETLAALH
CCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
AARQTAYLQQEIVLRCDQPCDITCAAPVTWHVLCEGSQEVLAEGRAQSRIALPGLRMGVH
HHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCHHHHHCCCCCCEEECCCHHHHHH
TLVLEGAKGVQETWLITAPAGAPSLEQIAGTPRCWGVMAALYGLGPAASQIGSFDDLAQA
HHHHHCCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHH
AAVCGQAGAAFLGINPVHALGMAAGDTISPYSPTHRGFLNTDHITMSSRTPTPGDAGDLL
HHHHHCCCCEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHH
DYAQHRHAQRPALRREFEAFLGMSPAPERSAFDAFCDVEGARLIEFAIFEQVSQQHGPDW
HHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
RVWPHRLHDPKNALHEISNRDLMFHKWLQWRADTQLASAQKAARDAGMALGLYLDLAVGA
CCCCHHCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCC
RVGGAETWGTDTATADGVSLGAPPDHLSPAGQNWQLAALSPVRLKATRYAALRAILAKNM
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
RHAGLMRIDHALGLSRSFWIPQDGSPGAYMRQPLKSLVALIAIEAHRAGTVIVGEDLGLV
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
PDGFRAEMARHGFYGYCVLQYEKDAEGVLLPPEHLRAQSLACFGTHDTPTLAGFWQGRDI
CCCHHHHHHHCCCEEEEEEEEECCCCCEECCHHHHHHHHEEEECCCCCCCEEEECCCCCC
DWWHRLGWIDASDAARARRARVQEKRQLVATPAPKRLPRKVTAAVRDKVYADLAASPAAL
CHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE
VAVQLDDMLSLTEAQNLPGTVDAHPNWRRRYPVRGQALAKDKALQATSLIMARAARNTAE
EEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RKDER
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]