| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is malQ [H]
Identifier: 110680076
GI number: 110680076
Start: 2742505
End: 2744502
Strand: Reverse
Name: malQ [H]
Synonym: RD1_2871
Alternate gene names: 110680076
Gene position: 2744502-2742505 (Counterclockwise)
Preceding gene: 110680077
Following gene: 110680075
Centisome position: 66.4
GC content: 64.01
Gene sequence:
>1998_bases ATGCGTGGTGATGCCGCCTTGTCCCGCCTTGCGCAAGAGGTCGGCGTTGTGGCCGAATATCAGGACATGCAGGGCATCAC GCATGTAACGCCCCCCGAGACGCAGTGGGCGATGTTGCGCGCCAATGGCTATCCTGCCCAAACCCATGCCGAAATCCGCG AAACACTGGCGGCGTTGCACGCGGCGAGGCAAACCGCCTATCTGCAGCAGGAGATTGTTCTGCGGTGTGATCAGCCGTGT GACATTACCTGCGCGGCACCGGTCACATGGCATGTGCTGTGCGAAGGGTCGCAAGAGGTTCTCGCAGAGGGGCGCGCACA ATCCCGGATTGCACTGCCCGGCTTGCGGATGGGGGTGCATACCCTTGTGCTGGAGGGCGCAAAGGGGGTTCAGGAAACCT GGCTGATCACGGCACCTGCGGGCGCGCCATCGCTGGAACAGATTGCCGGAACACCGCGGTGCTGGGGTGTGATGGCCGCC CTTTACGGGCTGGGTCCCGCTGCATCGCAGATCGGCAGCTTTGATGATCTGGCGCAGGCCGCGGCGGTTTGCGGTCAAGC AGGCGCGGCGTTTCTGGGGATCAACCCGGTGCATGCATTGGGCATGGCGGCGGGGGACACGATCAGCCCTTATTCCCCCA CACATCGCGGGTTTCTCAATACCGATCATATCACGATGAGCAGTCGCACGCCCACGCCAGGCGACGCGGGCGATCTGCTG GACTATGCGCAGCACCGCCACGCGCAACGGCCCGCCCTGAGGCGTGAATTCGAGGCATTTCTGGGCATGTCGCCCGCCCC TGAGCGCAGCGCTTTCGATGCGTTTTGTGATGTCGAAGGGGCGCGTCTGATTGAATTCGCCATTTTCGAACAGGTCAGCC AGCAACACGGACCCGATTGGCGGGTCTGGCCGCACAGGCTGCACGATCCGAAAAACGCGCTGCATGAGATATCCAACAGG GATCTGATGTTTCACAAATGGCTGCAGTGGCGCGCGGATACACAGCTTGCCAGCGCACAGAAAGCCGCGCGTGACGCAGG GATGGCGCTGGGGCTCTATCTTGATCTGGCCGTGGGCGCGCGTGTTGGCGGGGCCGAGACATGGGGCACAGACACGGCCA CAGCCGATGGCGTCTCGCTTGGCGCACCGCCGGATCACCTCAGCCCGGCAGGGCAGAACTGGCAGCTTGCAGCGCTCTCC CCGGTCAGGCTCAAGGCGACGCGCTACGCCGCCCTGCGCGCCATTCTGGCGAAGAACATGCGACATGCAGGGCTGATGCG GATCGACCATGCCCTGGGGCTGAGCCGCAGCTTCTGGATCCCGCAGGATGGCAGCCCGGGGGCCTATATGCGCCAGCCAC TGAAATCACTGGTGGCGCTGATTGCCATTGAGGCGCATCGCGCAGGCACGGTGATCGTGGGCGAAGACCTTGGCCTTGTC CCGGACGGGTTTCGTGCCGAGATGGCGCGCCACGGGTTTTACGGCTATTGCGTGCTGCAATATGAAAAAGACGCCGAGGG GGTGCTTCTGCCACCGGAGCATTTGCGCGCGCAGTCTCTGGCCTGCTTTGGCACGCATGACACGCCGACGCTGGCGGGGT TCTGGCAGGGGCGTGACATTGACTGGTGGCATCGCTTGGGTTGGATCGACGCAAGCGACGCCGCACGGGCGCGACGCGCA AGGGTGCAGGAAAAACGCCAGCTGGTTGCGACCCCGGCGCCCAAACGCTTGCCCAGAAAGGTCACAGCAGCCGTCAGGGA CAAGGTGTACGCGGATCTGGCGGCATCCCCGGCTGCCTTGGTGGCGGTGCAGCTTGACGATATGTTGTCTTTGACAGAGG CTCAGAACCTGCCGGGGACCGTTGACGCGCATCCAAACTGGCGTCGGCGCTACCCGGTGCGCGGGCAGGCTCTGGCCAAG GACAAGGCACTGCAGGCCACAAGCCTGATCATGGCGCGCGCCGCGCGAAATACCGCAGAACGAAAGGACGAGCGATGA
Upstream 100 bases:
>100_bases CGCACCGGGGCTGCAGCGCGCGGCAAATTGGAAGCGGGGGAACTGGTGGTTGAAGCCGAAGAGGTCATGGCGCTGATCCT GTCGCCCATGGATGCGCCCG
Downstream 100 bases:
>100_bases CCCTGTCGACCATCAAAAAAGGCCCTTTTGAGGGTCAGAAGCCCGGCACCTCGGGGCTGCGCAAGAAAACGCGGGTGTTT ATGGAGCCGGGGTATCTGGA
Product: 4-alpha-glucanotransferase
Products: NA
Alternate protein names: Amylomaltase; Disproportionating enzyme; D-enzyme [H]
Number of amino acids: Translated: 665; Mature: 665
Protein sequence:
>665_residues MRGDAALSRLAQEVGVVAEYQDMQGITHVTPPETQWAMLRANGYPAQTHAEIRETLAALHAARQTAYLQQEIVLRCDQPC DITCAAPVTWHVLCEGSQEVLAEGRAQSRIALPGLRMGVHTLVLEGAKGVQETWLITAPAGAPSLEQIAGTPRCWGVMAA LYGLGPAASQIGSFDDLAQAAAVCGQAGAAFLGINPVHALGMAAGDTISPYSPTHRGFLNTDHITMSSRTPTPGDAGDLL DYAQHRHAQRPALRREFEAFLGMSPAPERSAFDAFCDVEGARLIEFAIFEQVSQQHGPDWRVWPHRLHDPKNALHEISNR DLMFHKWLQWRADTQLASAQKAARDAGMALGLYLDLAVGARVGGAETWGTDTATADGVSLGAPPDHLSPAGQNWQLAALS PVRLKATRYAALRAILAKNMRHAGLMRIDHALGLSRSFWIPQDGSPGAYMRQPLKSLVALIAIEAHRAGTVIVGEDLGLV PDGFRAEMARHGFYGYCVLQYEKDAEGVLLPPEHLRAQSLACFGTHDTPTLAGFWQGRDIDWWHRLGWIDASDAARARRA RVQEKRQLVATPAPKRLPRKVTAAVRDKVYADLAASPAALVAVQLDDMLSLTEAQNLPGTVDAHPNWRRRYPVRGQALAK DKALQATSLIMARAARNTAERKDER
Sequences:
>Translated_665_residues MRGDAALSRLAQEVGVVAEYQDMQGITHVTPPETQWAMLRANGYPAQTHAEIRETLAALHAARQTAYLQQEIVLRCDQPC DITCAAPVTWHVLCEGSQEVLAEGRAQSRIALPGLRMGVHTLVLEGAKGVQETWLITAPAGAPSLEQIAGTPRCWGVMAA LYGLGPAASQIGSFDDLAQAAAVCGQAGAAFLGINPVHALGMAAGDTISPYSPTHRGFLNTDHITMSSRTPTPGDAGDLL DYAQHRHAQRPALRREFEAFLGMSPAPERSAFDAFCDVEGARLIEFAIFEQVSQQHGPDWRVWPHRLHDPKNALHEISNR DLMFHKWLQWRADTQLASAQKAARDAGMALGLYLDLAVGARVGGAETWGTDTATADGVSLGAPPDHLSPAGQNWQLAALS PVRLKATRYAALRAILAKNMRHAGLMRIDHALGLSRSFWIPQDGSPGAYMRQPLKSLVALIAIEAHRAGTVIVGEDLGLV PDGFRAEMARHGFYGYCVLQYEKDAEGVLLPPEHLRAQSLACFGTHDTPTLAGFWQGRDIDWWHRLGWIDASDAARARRA RVQEKRQLVATPAPKRLPRKVTAAVRDKVYADLAASPAALVAVQLDDMLSLTEAQNLPGTVDAHPNWRRRYPVRGQALAK DKALQATSLIMARAARNTAERKDER >Mature_665_residues MRGDAALSRLAQEVGVVAEYQDMQGITHVTPPETQWAMLRANGYPAQTHAEIRETLAALHAARQTAYLQQEIVLRCDQPC DITCAAPVTWHVLCEGSQEVLAEGRAQSRIALPGLRMGVHTLVLEGAKGVQETWLITAPAGAPSLEQIAGTPRCWGVMAA LYGLGPAASQIGSFDDLAQAAAVCGQAGAAFLGINPVHALGMAAGDTISPYSPTHRGFLNTDHITMSSRTPTPGDAGDLL DYAQHRHAQRPALRREFEAFLGMSPAPERSAFDAFCDVEGARLIEFAIFEQVSQQHGPDWRVWPHRLHDPKNALHEISNR DLMFHKWLQWRADTQLASAQKAARDAGMALGLYLDLAVGARVGGAETWGTDTATADGVSLGAPPDHLSPAGQNWQLAALS PVRLKATRYAALRAILAKNMRHAGLMRIDHALGLSRSFWIPQDGSPGAYMRQPLKSLVALIAIEAHRAGTVIVGEDLGLV PDGFRAEMARHGFYGYCVLQYEKDAEGVLLPPEHLRAQSLACFGTHDTPTLAGFWQGRDIDWWHRLGWIDASDAARARRA RVQEKRQLVATPAPKRLPRKVTAAVRDKVYADLAASPAALVAVQLDDMLSLTEAQNLPGTVDAHPNWRRRYPVRGQALAK DKALQATSLIMARAARNTAERKDER
Specific function: Unknown
COG id: COG1640
COG function: function code G; 4-alpha-glucanotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the disproportionating enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1789821, Length=659, Percent_Identity=29.2867981790592, Blast_Score=245, Evalue=7e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003385 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF02446 Glyco_hydro_77 [H]
EC number: =2.4.1.25 [H]
Molecular weight: Translated: 72325; Mature: 72325
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGDAALSRLAQEVGVVAEYQDMQGITHVTPPETQWAMLRANGYPAQTHAEIRETLAALH CCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH AARQTAYLQQEIVLRCDQPCDITCAAPVTWHVLCEGSQEVLAEGRAQSRIALPGLRMGVH HHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCHHHHHCCCCCCEEECCCHHHHHH TLVLEGAKGVQETWLITAPAGAPSLEQIAGTPRCWGVMAALYGLGPAASQIGSFDDLAQA HHHHHCCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHH AAVCGQAGAAFLGINPVHALGMAAGDTISPYSPTHRGFLNTDHITMSSRTPTPGDAGDLL HHHHHCCCCEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHH DYAQHRHAQRPALRREFEAFLGMSPAPERSAFDAFCDVEGARLIEFAIFEQVSQQHGPDW HHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC RVWPHRLHDPKNALHEISNRDLMFHKWLQWRADTQLASAQKAARDAGMALGLYLDLAVGA CCCCHHCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCC RVGGAETWGTDTATADGVSLGAPPDHLSPAGQNWQLAALSPVRLKATRYAALRAILAKNM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH RHAGLMRIDHALGLSRSFWIPQDGSPGAYMRQPLKSLVALIAIEAHRAGTVIVGEDLGLV HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC PDGFRAEMARHGFYGYCVLQYEKDAEGVLLPPEHLRAQSLACFGTHDTPTLAGFWQGRDI CCCHHHHHHHCCCEEEEEEEEECCCCCEECCHHHHHHHHEEEECCCCCCCEEEECCCCCC DWWHRLGWIDASDAARARRARVQEKRQLVATPAPKRLPRKVTAAVRDKVYADLAASPAAL CHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE VAVQLDDMLSLTEAQNLPGTVDAHPNWRRRYPVRGQALAKDKALQATSLIMARAARNTAE EEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RKDER HCCCC >Mature Secondary Structure MRGDAALSRLAQEVGVVAEYQDMQGITHVTPPETQWAMLRANGYPAQTHAEIRETLAALH CCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH AARQTAYLQQEIVLRCDQPCDITCAAPVTWHVLCEGSQEVLAEGRAQSRIALPGLRMGVH HHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCHHHHHCCCCCCEEECCCHHHHHH TLVLEGAKGVQETWLITAPAGAPSLEQIAGTPRCWGVMAALYGLGPAASQIGSFDDLAQA HHHHHCCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHH AAVCGQAGAAFLGINPVHALGMAAGDTISPYSPTHRGFLNTDHITMSSRTPTPGDAGDLL HHHHHCCCCEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHH DYAQHRHAQRPALRREFEAFLGMSPAPERSAFDAFCDVEGARLIEFAIFEQVSQQHGPDW HHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC RVWPHRLHDPKNALHEISNRDLMFHKWLQWRADTQLASAQKAARDAGMALGLYLDLAVGA CCCCHHCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCC RVGGAETWGTDTATADGVSLGAPPDHLSPAGQNWQLAALSPVRLKATRYAALRAILAKNM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH RHAGLMRIDHALGLSRSFWIPQDGSPGAYMRQPLKSLVALIAIEAHRAGTVIVGEDLGLV HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC PDGFRAEMARHGFYGYCVLQYEKDAEGVLLPPEHLRAQSLACFGTHDTPTLAGFWQGRDI CCCHHHHHHHCCCEEEEEEEEECCCCCEECCHHHHHHHHEEEECCCCCCCEEEECCCCCC DWWHRLGWIDASDAARARRARVQEKRQLVATPAPKRLPRKVTAAVRDKVYADLAASPAAL CHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE VAVQLDDMLSLTEAQNLPGTVDAHPNWRRRYPVRGQALAKDKALQATSLIMARAARNTAE EEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RKDER HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]