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The map label for this gene is 110680061

Identifier: 110680061

GI number: 110680061

Start: 2724942

End: 2725304

Strand: Reverse

Name: 110680061

Synonym: RD1_2856

Alternate gene names: NA

Gene position: 2725304-2724942 (Counterclockwise)

Preceding gene: 110680062

Following gene: 110680060

Centisome position: 65.94

GC content: 59.78

Gene sequence:

>363_bases
ATGTCGTTCAAGCGTATCTCCTCCGGTGGCGCCTTTGAAACTAAGGTTGGGTATTGCCGCGCTGTAGTCGCGGGGGGGTG
GGTGCATGTCTCGGGCACCGTTGGTCAGGGCGATACGGTGACCGAGCAATGCGCCTCAGCGCTTTCTGTCATCGAGGGGG
CCCTTGAAAAGGCCGGCTGTGGCTTTGCGGATGTGGTGCGGGTGACATATATGCTGCCCCGCGCCGCTGATTTCGAATCC
TGTTGGCCCCTCTTGCGCGCCGCTTTTGGCGCTAACCCGCCCGCTGCGACCATGATCGAATGCAATCTGATTGACCCACA
CTTCAGGATCGAGATCGAAGTCACCGCTTTGCTGCCCGAATAG

Upstream 100 bases:

>100_bases
GGCACTGAGCCCTGTTTTTCCGTAAGATCGCAATCCCGCTCGACTGATGCGACCGCCCCGAGCTGTGCTTGCGCCAACCA
TACCAAACGAGAACAAGAGC

Downstream 100 bases:

>100_bases
ACGCGGCAAACCGCGCATCCATCTGGACGTTTTCGGTACAATCCGCCATAGGTGTTGTAACGGTTTGATCGGAGAAAACC
CATGGGCCTTTTGACTTCTA

Product: endoribonuclease L-PSP family protein, putative

Products: NA

Alternate protein names: Endoribonuclease L-PSP Family Protein; Pyrimidine Utilization Protein C; Endoribonuclease; Acetyltransferase; Endoribonuclease L-PSP YjgF-Like; Endoribonuclease L-PSP Family; Translation Initiation Inhibitor; YjgF-Family Protein; Endoribonuclease L-PSP Superfamily; Endoribonuclease L-PSP/Chorismate Mutase

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSFKRISSGGAFETKVGYCRAVVAGGWVHVSGTVGQGDTVTEQCASALSVIEGALEKAGCGFADVVRVTYMLPRAADFES
CWPLLRAAFGANPPAATMIECNLIDPHFRIEIEVTALLPE

Sequences:

>Translated_120_residues
MSFKRISSGGAFETKVGYCRAVVAGGWVHVSGTVGQGDTVTEQCASALSVIEGALEKAGCGFADVVRVTYMLPRAADFES
CWPLLRAAFGANPPAATMIECNLIDPHFRIEIEVTALLPE
>Mature_119_residues
SFKRISSGGAFETKVGYCRAVVAGGWVHVSGTVGQGDTVTEQCASALSVIEGALEKAGCGFADVVRVTYMLPRAADFESC
WPLLRAAFGANPPAATMIECNLIDPHFRIEIEVTALLPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12708; Mature: 12576

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFKRISSGGAFETKVGYCRAVVAGGWVHVSGTVGQGDTVTEQCASALSVIEGALEKAGC
CCCCCCCCCCCCCCHHHHHHHHEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC
GFADVVRVTYMLPRAADFESCWPLLRAAFGANPPAATMIECNLIDPHFRIEIEVTALLPE
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEEEEECCC
>Mature Secondary Structure 
SFKRISSGGAFETKVGYCRAVVAGGWVHVSGTVGQGDTVTEQCASALSVIEGALEKAGC
CCCCCCCCCCCCCHHHHHHHHEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC
GFADVVRVTYMLPRAADFESCWPLLRAAFGANPPAATMIECNLIDPHFRIEIEVTALLPE
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA