| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is blh [H]
Identifier: 110680042
GI number: 110680042
Start: 2706579
End: 2707004
Strand: Direct
Name: blh [H]
Synonym: RD1_2837
Alternate gene names: 110680042
Gene position: 2706579-2707004 (Clockwise)
Preceding gene: 110680041
Following gene: 110680048
Centisome position: 65.49
GC content: 59.62
Gene sequence:
>426_bases ATGGATACACGTGAAATTACCCCGAAATTTTCTGTCGCTCCGCAGATTTCACCGGATGACATGCACGATCTTGTCGCCGC CGGGTTCAAGCGGATTTTGTGCAACCGGCCCGATGCCGAAGTGCCCGTGAGCCATCAGGCGGCGTCGATGGAAGCTGCCG CTAGGGAAGCCGGTCTGGAGTTTTTCTTCTGCCCTTTGACACATCTGACCATGACGCCGGACGTCATTGCCCACAATCAT GAATTGATCGCGGAGTGCGACGGGCCAGTGCTTGCCTACTGCGCCTCCGGCACCAGGTCGACGATCGCATGGGCGCTGGC GGCGGTTCAATATTCGTCGGTCGACGACGTCGTGTCAGCGGCGCGGGCTGCCGGGTACGAGATTGACAACCTGCGACCAA CGCTCGAAGCGGCGGCAAATCGCTAA
Upstream 100 bases:
>100_bases GAAGCTGAAACAGGATTATCGCTTGCCGCAGCTATCAGACCCTGCATTTTGCGGCTTTGTTCATCTGGACAAGCGCGTCT GCCCGGCCTACTCAATGGGC
Downstream 100 bases:
>100_bases GGTGCCTCGCGATCCGTCAGGCGATGTTCAACTTTGGCAAGTCGCCGAGATCGGGTAGATCACCGTCAAGATCGGGGAGG TCCGGCAGGGCGGTATCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MDTREITPKFSVAPQISPDDMHDLVAAGFKRILCNRPDAEVPVSHQAASMEAAAREAGLEFFFCPLTHLTMTPDVIAHNH ELIAECDGPVLAYCASGTRSTIAWALAAVQYSSVDDVVSAARAAGYEIDNLRPTLEAAANR
Sequences:
>Translated_141_residues MDTREITPKFSVAPQISPDDMHDLVAAGFKRILCNRPDAEVPVSHQAASMEAAAREAGLEFFFCPLTHLTMTPDVIAHNH ELIAECDGPVLAYCASGTRSTIAWALAAVQYSSVDDVVSAARAAGYEIDNLRPTLEAAANR >Mature_141_residues MDTREITPKFSVAPQISPDDMHDLVAAGFKRILCNRPDAEVPVSHQAASMEAAAREAGLEFFFCPLTHLTMTPDVIAHNH ELIAECDGPVLAYCASGTRSTIAWALAAVQYSSVDDVVSAARAAGYEIDNLRPTLEAAANR
Specific function: Unknown
COG id: COG3453
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 15156; Mature: 15156
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTREITPKFSVAPQISPDDMHDLVAAGFKRILCNRPDAEVPVSHQAASMEAAAREAGLE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCE FFFCPLTHLTMTPDVIAHNHELIAECDGPVLAYCASGTRSTIAWALAAVQYSSVDDVVSA EEECCCHHCCCCCHHHHCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHH ARAAGYEIDNLRPTLEAAANR HHHCCCCCCCCCHHHHHHCCC >Mature Secondary Structure MDTREITPKFSVAPQISPDDMHDLVAAGFKRILCNRPDAEVPVSHQAASMEAAAREAGLE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCE FFFCPLTHLTMTPDVIAHNHELIAECDGPVLAYCASGTRSTIAWALAAVQYSSVDDVVSA EEECCCHHCCCCCHHHHCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHH ARAAGYEIDNLRPTLEAAANR HHHCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]