Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is blh [H]

Identifier: 110680042

GI number: 110680042

Start: 2706579

End: 2707004

Strand: Direct

Name: blh [H]

Synonym: RD1_2837

Alternate gene names: 110680042

Gene position: 2706579-2707004 (Clockwise)

Preceding gene: 110680041

Following gene: 110680048

Centisome position: 65.49

GC content: 59.62

Gene sequence:

>426_bases
ATGGATACACGTGAAATTACCCCGAAATTTTCTGTCGCTCCGCAGATTTCACCGGATGACATGCACGATCTTGTCGCCGC
CGGGTTCAAGCGGATTTTGTGCAACCGGCCCGATGCCGAAGTGCCCGTGAGCCATCAGGCGGCGTCGATGGAAGCTGCCG
CTAGGGAAGCCGGTCTGGAGTTTTTCTTCTGCCCTTTGACACATCTGACCATGACGCCGGACGTCATTGCCCACAATCAT
GAATTGATCGCGGAGTGCGACGGGCCAGTGCTTGCCTACTGCGCCTCCGGCACCAGGTCGACGATCGCATGGGCGCTGGC
GGCGGTTCAATATTCGTCGGTCGACGACGTCGTGTCAGCGGCGCGGGCTGCCGGGTACGAGATTGACAACCTGCGACCAA
CGCTCGAAGCGGCGGCAAATCGCTAA

Upstream 100 bases:

>100_bases
GAAGCTGAAACAGGATTATCGCTTGCCGCAGCTATCAGACCCTGCATTTTGCGGCTTTGTTCATCTGGACAAGCGCGTCT
GCCCGGCCTACTCAATGGGC

Downstream 100 bases:

>100_bases
GGTGCCTCGCGATCCGTCAGGCGATGTTCAACTTTGGCAAGTCGCCGAGATCGGGTAGATCACCGTCAAGATCGGGGAGG
TCCGGCAGGGCGGTATCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MDTREITPKFSVAPQISPDDMHDLVAAGFKRILCNRPDAEVPVSHQAASMEAAAREAGLEFFFCPLTHLTMTPDVIAHNH
ELIAECDGPVLAYCASGTRSTIAWALAAVQYSSVDDVVSAARAAGYEIDNLRPTLEAAANR

Sequences:

>Translated_141_residues
MDTREITPKFSVAPQISPDDMHDLVAAGFKRILCNRPDAEVPVSHQAASMEAAAREAGLEFFFCPLTHLTMTPDVIAHNH
ELIAECDGPVLAYCASGTRSTIAWALAAVQYSSVDDVVSAARAAGYEIDNLRPTLEAAANR
>Mature_141_residues
MDTREITPKFSVAPQISPDDMHDLVAAGFKRILCNRPDAEVPVSHQAASMEAAAREAGLEFFFCPLTHLTMTPDVIAHNH
ELIAECDGPVLAYCASGTRSTIAWALAAVQYSSVDDVVSAARAAGYEIDNLRPTLEAAANR

Specific function: Unknown

COG id: COG3453

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-B beta-lactamase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005939
- InterPro:   IPR001279 [H]

Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 15156; Mature: 15156

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTREITPKFSVAPQISPDDMHDLVAAGFKRILCNRPDAEVPVSHQAASMEAAAREAGLE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCE
FFFCPLTHLTMTPDVIAHNHELIAECDGPVLAYCASGTRSTIAWALAAVQYSSVDDVVSA
EEECCCHHCCCCCHHHHCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHH
ARAAGYEIDNLRPTLEAAANR
HHHCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MDTREITPKFSVAPQISPDDMHDLVAAGFKRILCNRPDAEVPVSHQAASMEAAAREAGLE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCE
FFFCPLTHLTMTPDVIAHNHELIAECDGPVLAYCASGTRSTIAWALAAVQYSSVDDVVSA
EEECCCHHCCCCCHHHHCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHH
ARAAGYEIDNLRPTLEAAANR
HHHCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]