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The map label for this gene is 110680048

Identifier: 110680048

GI number: 110680048

Start: 2713364

End: 2714716

Strand: Direct

Name: 110680048

Synonym: RD1_2843

Alternate gene names: NA

Gene position: 2713364-2714716 (Clockwise)

Preceding gene: 110680042

Following gene: 110680049

Centisome position: 65.65

GC content: 59.65

Gene sequence:

>1353_bases
ATGTCCAAATCGAACTTTACACGTCGTGGTTTGCTCAAGACCAGCGCCGTGGCCGGGGCCGCTGGCCTGACACTGCCGAC
ATATCTGCGCGCAGACGGCCATTCCGGTTTTACGAATGCGCCTCAAGGCGACACCGTCACGCTGGGCTTCAACGTGCCAC
AATCCGGCCCCTATGCGGATGAGGGTGCGGACGAGTTGCGCGCCTATGAGCTGGCCGTCGAACATCTGAATGGCACCGGT
GCTGACAACGGCATGCTGGAAACCTTCAGCTCAAAGGCGCTGACCGGAAACGGTATTCTCGGCAAGAAAGTCGAATATGT
CACAGGCGACACGCAGACAAAATCCGACGCGGCGCGCGCTTCTGCCCGCTCGATGATCGAAAAAGACGGCGCTGTCATGA
TCACGGGTGGCTCGTCCTCCGGTGTGGCCGTAGCGGTACAGGCTCTGTGTCAGGAAGCTGGCATCATCTTCATGGCGGGC
CTCACGCATTCCAACGACACGACCGGCAAGGACCGCAAGGCAAATGGCTTCCGCCATTTCTTCAACTCCTACATGTCCGG
TGCGGCGCTGGCCCCTGTTCTGGCGGCCAACTACGGCACAGACCGCAAGGCCTATCACCTGACCGCCGACTACAACTGGG
GCTACACCACAGAAGAAGCGGTGAAATCCTCGACCGAGGCCATGGGCTGGGAAACCGTCAACACGGTTCTGACACCGCTG
ACGCAGACGGACTTCTCCTCCTATATCGCGCCGGTGCTGCAATCGGGCGCGGACGTGCTGGTTCTGAACCACTACGGCGG
CAACATGGTCAACTCGCTGACCAACGCGGTTCAGTTCGGCCTGCGTGACAAGATGGTCAACGGCAAACAGTTCGAAATCG
TCGTACCGCTCTATTCCCGCCTGATGGCGAAAGGTGCGGGTGCCAACGTCAAGGGCATCTTTGGCTCGACAAACTGGCAC
TGGTCCCTGCAGGACGAAGGCTCCAAGGCATTTGTCAAATCCTTCGGCACGAAATACGGCTTCCCACCCTCACAGGCGGC
ACATACCTGCTATGTGCAGACACTGCTTTATGCGGATGCGGTGGAGCGCGGTGGCTCGTTCAACCCATGTTCGGTTGTGG
AAGCGCTGCGCGACTTCGAATTCGACGGCATGGGCAACGGCCCGACGCTCTATCGCGGCGAGGACCATCAGTGCTTCAAG
GACGTGCTGGTCGTGAAGGGGAAGGAAAACCCCTCCTCCGAATTCGACCTTCTGGAGATCGTCGAAGTCACACCGGTCGA
GCAGGTCACATATGCCCCCGATCACCCGCAATTCGCGGGCGGCAACATGGGCACATGCAATCCCGGCGCATAA

Upstream 100 bases:

>100_bases
TCTTGCTTGGCACGGTAAACACTGCACTTAAGTGCTCTATACGCGGGCAGTCTGCAATTATTCCCGCCCAGCGTGTGATA
AACCTATTGGGAGGATCTTC

Downstream 100 bases:

>100_bases
GCGCAACCAAAACACATACCGGGCGGCGGCACTCGCCGTCCGGCCTTCCCGTGATACGGGACCAATTCGCTTCATGAAGG
TGGGACCATGGACGCATTAC

Product: branched-chain amino acid ABC transporter, periplasmic binding protein, putative

Products: NA

Alternate protein names: UreA/Short-Chain Amide ABC Transporter; Branched-Chain Amino Acid ABC Transporter; ABC-Type Transporter Periplasmic; ABC-Type Transporter Periplasmic Component; Transporter Signal Peptide Protein; Inner-Membrane Translocator; ABC Transporter Periplasmic Protein; Tat Pathway Signal Sequence Domain-Containing Protein; ABC Transporter; Tat Pathway Signal Sequence Domain Protein; Amino Acid ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MSKSNFTRRGLLKTSAVAGAAGLTLPTYLRADGHSGFTNAPQGDTVTLGFNVPQSGPYADEGADELRAYELAVEHLNGTG
ADNGMLETFSSKALTGNGILGKKVEYVTGDTQTKSDAARASARSMIEKDGAVMITGGSSSGVAVAVQALCQEAGIIFMAG
LTHSNDTTGKDRKANGFRHFFNSYMSGAALAPVLAANYGTDRKAYHLTADYNWGYTTEEAVKSSTEAMGWETVNTVLTPL
TQTDFSSYIAPVLQSGADVLVLNHYGGNMVNSLTNAVQFGLRDKMVNGKQFEIVVPLYSRLMAKGAGANVKGIFGSTNWH
WSLQDEGSKAFVKSFGTKYGFPPSQAAHTCYVQTLLYADAVERGGSFNPCSVVEALRDFEFDGMGNGPTLYRGEDHQCFK
DVLVVKGKENPSSEFDLLEIVEVTPVEQVTYAPDHPQFAGGNMGTCNPGA

Sequences:

>Translated_450_residues
MSKSNFTRRGLLKTSAVAGAAGLTLPTYLRADGHSGFTNAPQGDTVTLGFNVPQSGPYADEGADELRAYELAVEHLNGTG
ADNGMLETFSSKALTGNGILGKKVEYVTGDTQTKSDAARASARSMIEKDGAVMITGGSSSGVAVAVQALCQEAGIIFMAG
LTHSNDTTGKDRKANGFRHFFNSYMSGAALAPVLAANYGTDRKAYHLTADYNWGYTTEEAVKSSTEAMGWETVNTVLTPL
TQTDFSSYIAPVLQSGADVLVLNHYGGNMVNSLTNAVQFGLRDKMVNGKQFEIVVPLYSRLMAKGAGANVKGIFGSTNWH
WSLQDEGSKAFVKSFGTKYGFPPSQAAHTCYVQTLLYADAVERGGSFNPCSVVEALRDFEFDGMGNGPTLYRGEDHQCFK
DVLVVKGKENPSSEFDLLEIVEVTPVEQVTYAPDHPQFAGGNMGTCNPGA
>Mature_449_residues
SKSNFTRRGLLKTSAVAGAAGLTLPTYLRADGHSGFTNAPQGDTVTLGFNVPQSGPYADEGADELRAYELAVEHLNGTGA
DNGMLETFSSKALTGNGILGKKVEYVTGDTQTKSDAARASARSMIEKDGAVMITGGSSSGVAVAVQALCQEAGIIFMAGL
THSNDTTGKDRKANGFRHFFNSYMSGAALAPVLAANYGTDRKAYHLTADYNWGYTTEEAVKSSTEAMGWETVNTVLTPLT
QTDFSSYIAPVLQSGADVLVLNHYGGNMVNSLTNAVQFGLRDKMVNGKQFEIVVPLYSRLMAKGAGANVKGIFGSTNWHW
SLQDEGSKAFVKSFGTKYGFPPSQAAHTCYVQTLLYADAVERGGSFNPCSVVEALRDFEFDGMGNGPTLYRGEDHQCFKD
VLVVKGKENPSSEFDLLEIVEVTPVEQVTYAPDHPQFAGGNMGTCNPGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47908; Mature: 47777

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSNFTRRGLLKTSAVAGAAGLTLPTYLRADGHSGFTNAPQGDTVTLGFNVPQSGPYAD
CCCCCCCHHCCHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCC
EGADELRAYELAVEHLNGTGADNGMLETFSSKALTGNGILGKKVEYVTGDTQTKSDAARA
CCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEECCCCCCCEEEEEECCCCCHHHHHHH
SARSMIEKDGAVMITGGSSSGVAVAVQALCQEAGIIFMAGLTHSNDTTGKDRKANGFRHF
HHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHH
FNSYMSGAALAPVLAANYGTDRKAYHLTADYNWGYTTEEAVKSSTEAMGWETVNTVLTPL
HHHHHCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHCC
TQTDFSSYIAPVLQSGADVLVLNHYGGNMVNSLTNAVQFGLRDKMVNGKQFEIVVPLYSR
HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH
LMAKGAGANVKGIFGSTNWHWSLQDEGSKAFVKSFGTKYGFPPSQAAHTCYVQTLLYADA
HHHCCCCCCEEEEECCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
VERGGSFNPCSVVEALRDFEFDGMGNGPTLYRGEDHQCFKDVLVVKGKENPSSEFDLLEI
HHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHEEEECCCCCCCCCCCEEE
VEVTPVEQVTYAPDHPQFAGGNMGTCNPGA
EECCCHHHEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKSNFTRRGLLKTSAVAGAAGLTLPTYLRADGHSGFTNAPQGDTVTLGFNVPQSGPYAD
CCCCCCHHCCHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCC
EGADELRAYELAVEHLNGTGADNGMLETFSSKALTGNGILGKKVEYVTGDTQTKSDAARA
CCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEECCCCCCCEEEEEECCCCCHHHHHHH
SARSMIEKDGAVMITGGSSSGVAVAVQALCQEAGIIFMAGLTHSNDTTGKDRKANGFRHF
HHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHH
FNSYMSGAALAPVLAANYGTDRKAYHLTADYNWGYTTEEAVKSSTEAMGWETVNTVLTPL
HHHHHCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHCC
TQTDFSSYIAPVLQSGADVLVLNHYGGNMVNSLTNAVQFGLRDKMVNGKQFEIVVPLYSR
HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH
LMAKGAGANVKGIFGSTNWHWSLQDEGSKAFVKSFGTKYGFPPSQAAHTCYVQTLLYADA
HHHCCCCCCEEEEECCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
VERGGSFNPCSVVEALRDFEFDGMGNGPTLYRGEDHQCFKDVLVVKGKENPSSEFDLLEI
HHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHEEEECCCCCCCCCCCEEE
VEVTPVEQVTYAPDHPQFAGGNMGTCNPGA
EECCCHHHEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA